RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 USP21Q9UK80 565 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 GLI3P10071 1580 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 LRP6O75581 1613 aa7.72□□□□□ -1.17
CHD9-217ENST00000565832 BCL9O00512 1426 aa7.72□□□□□ -1.17
CHD9-217ENST00000565832 GRM8O00222 908 aa7.72□□□□□ -1.17
CHD9-217ENST00000565832 SURF6O75683 361 aaKnown RBP7.72□□□□□ -1.17
CHD9-217ENST00000565832 GCKRQ14397 625 aa7.72□□□□□ -1.17
CHD9-217ENST00000565832 FNBP4Q8N3X1 1017 aaPredicted RBP7.72□□□□□ -1.17
CHD9-217ENST00000565832 KLHDC4Q8TBB5 520 aa7.72□□□□□ -1.17
CHD9-217ENST00000565832 SP7Q8TDD2 431 aaPredicted RBP7.72□□□□□ -1.17
CHD9-217ENST00000565832 IL1RAPL2Q9NP60 686 aa7.72□□□□□ -1.17
CHD9-217ENST00000565832 PA2G4Q9UQ80 394 aaKnown RBP7.72□□□□□ -1.17
CHD9-217ENST00000565832 THRAP3Q9Y2W1 955 aaKnown RBP7.72□□□□□ -1.17
CHD9-217ENST00000565832 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.72□□□□□ -1.17
CHD9-217ENST00000565832 HMMRO75330 724 aa7.71□□□□□ -1.17
CHD9-217ENST00000565832 SSH3Q8TE77 659 aa7.71□□□□□ -1.17
CHD9-217ENST00000565832 BICC1Q9H694 974 aaKnown RBP7.71□□□□□ -1.17
CHD9-217ENST00000565832 CDHR5Q9HBB8 845 aa7.71□□□□□ -1.17
CHD9-217ENST00000565832 NRAPQ86VF7 1730 aa7.71□□□□□ -1.17
CHD9-217ENST00000565832 ALDH1L1O75891 902 aa7.71□□□□□ -1.18
CHD9-217ENST00000565832 GSPT1P15170 499 aaKnown RBP7.71□□□□□ -1.18
CHD9-217ENST00000565832 SLC4A3P48751 1232 aa7.71□□□□□ -1.18
CHD9-217ENST00000565832 NEXNQ0ZGT2 675 aa7.71□□□□□ -1.18
CHD9-217ENST00000565832 MEX3CQ5U5Q3 659 aaKnown RBP7.71□□□□□ -1.18
CHD9-217ENST00000565832 SMIM5Q71RC9 77 aa7.71□□□□□ -1.18
CHD9-217ENST00000565832 UBE3BQ7Z3V4 1068 aa7.71□□□□□ -1.18
CHD9-217ENST00000565832 PLBD2Q8NHP8 589 aa7.71□□□□□ -1.18
CHD9-217ENST00000565832 UBR2Q8IWV8 1755 aa7.71□□□□□ -1.18
CHD9-217ENST00000565832 TNS2Q63HR2 1409 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 CYP19A1P11511 503 aaPredicted RBP7.7□□□□□ -1.18
CHD9-217ENST00000565832 VPS72Q15906 364 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 SYNE4Q8N205 404 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 FAM117AQ9C073 453 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 PCDHGA4Q9Y5G9 962 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 PXDNLA1KZ92 1463 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 A0A087WZG4 1122 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 ANP32AP39687 249 aaKnown RBP7.7□□□□□ -1.18
CHD9-217ENST00000565832 EN1Q05925 392 aaPredicted RBP7.7□□□□□ -1.18
CHD9-217ENST00000565832 HLFQ16534 295 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 AMHR2Q16671 573 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 NUTM1Q86Y26 1132 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 PARP9Q8IXQ6 854 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 CDCA7Q9BWT1 371 aaPredicted RBP7.7□□□□□ -1.18
CHD9-217ENST00000565832 LRRCC1Q9C099 1032 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 TBC1D2BQ9UPU7 963 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 ZBTB1Q9Y2K1 713 aa7.7□□□□□ -1.18
CHD9-217ENST00000565832 MAP3K7O43318 606 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 PHF14O94880 888 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 STARD3NLO95772 234 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 ATP6V1AP38606 617 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 IPO9Q96P70 1041 aaKnown RBP7.69□□□□□ -1.18
CHD9-217ENST00000565832 SIL1Q9H173 461 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 PCDHGA10Q9Y5H3 936 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 IBTKQ9P2D0 1353 aaPredicted RBP7.69□□□□□ -1.18
CHD9-217ENST00000565832 MFAP1P55081 439 aaKnown RBP7.69□□□□□ -1.18
CHD9-217ENST00000565832 ITPK1Q13572 414 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 BMP2KLQ5H9B9 411 aa7.69□□□□□ -1.18
CHD9-217ENST00000565832 NPDC1Q9NQX5 325 aaPredicted RBP7.69□□□□□ -1.18
CHD9-217ENST00000565832 UTYO14607 1347 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 AFF2P51816 1311 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 SPATA31A6Q5VVP1 1343 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 PAPPAQ13219 1627 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 N4BP2Q86UW6 1770 aaPredicted RBP7.68□□□□□ -1.18
CHD9-217ENST00000565832 SDSP20132 328 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 GPTP24298 496 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 PDE1AP54750 535 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 RHPN1Q8TCX5 695 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 GJD4Q96KN9 370 aaPredicted RBP7.68□□□□□ -1.18
CHD9-217ENST00000565832 EPAS1Q99814 870 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 DAXXQ9UER7 740 aaPredicted RBP7.68□□□□□ -1.18
CHD9-217ENST00000565832 DOT1LQ8TEK3 1739 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 NWD2Q9ULI1 1742 aa7.68□□□□□ -1.18
CHD9-217ENST00000565832 LOC102724428A0A0B4J2F2 783 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 MAP4K4O95819 1239 aaPredicted RBP7.67□□□□□ -1.18
CHD9-217ENST00000565832 CASP7P55210 303 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 SIK1P57059 783 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 TSR1Q2NL82 804 aaKnown RBP7.67□□□□□ -1.18
CHD9-217ENST00000565832 TTC22Q5TAA0 569 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 INTS5Q6P9B9 1019 aaKnown RBP7.67□□□□□ -1.18
CHD9-217ENST00000565832 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 FAM89AQ96GI7 184 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 CCDC85AQ96PX6 553 aaPredicted RBP7.67□□□□□ -1.18
CHD9-217ENST00000565832 TEX13AQ9BXU3 409 aaPredicted RBP7.67□□□□□ -1.18
CHD9-217ENST00000565832 WNK3Q9BYP7 1800 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 UTRNP46939 3433 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 ARFGEF2Q9Y6D5 1785 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 H7C1W4 665 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 OS9Q13438 667 aaPredicted RBP7.67□□□□□ -1.18
CHD9-217ENST00000565832 MTX1Q13505 466 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 LMBR1LQ6UX01 489 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 ERBB4Q15303 1308 aa7.67□□□□□ -1.18
CHD9-217ENST00000565832 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 AFDNP55196 1824 aaKnown RBP7.66□□□□□ -1.18
CHD9-217ENST00000565832 SASH1O94885 1247 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 CRKLP46109 303 aaKnown RBP7.66□□□□□ -1.18
CHD9-217ENST00000565832 FOXO4P98177 505 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 TCIRG1Q13488 830 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 TTLL12Q14166 644 aaPredicted RBP7.66□□□□□ -1.18
CHD9-217ENST00000565832 SLAIN1Q8ND83 568 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms