RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	DDX58	O95786	925 aa	Known RBP	29.14	■■■□□ 2.26
KIFC3-223	ENST00000565684	POTEI	P0CG38	1075 aa		29.14	■■■□□ 2.26
KIFC3-223	ENST00000565684	POTEJ	P0CG39	1038 aa		29.14	■■■□□ 2.26
KIFC3-223	ENST00000565684	CCDC191	Q8NCU4	936 aa		29.14	■■■□□ 2.26
KIFC3-223	ENST00000565684	STK31	Q9BXU1	1019 aa		29.14	■■■□□ 2.26
KIFC3-223	ENST00000565684	RTFDC1	Q9BY42	306 aa	Predicted RBP	29.14	■■■□□ 2.26
KIFC3-223	ENST00000565684	MAP3K2	Q9Y2U5	619 aa		29.14	■■■□□ 2.26
KIFC3-223	ENST00000565684	PI4KAP2	A4QPH2	592 aa		29.13	■■■□□ 2.25
KIFC3-223	ENST00000565684	PI4KAP1	Q8N8J0	262 aa		29.13	■■■□□ 2.25
KIFC3-223	ENST00000565684	JDP2	Q8WYK2	163 aa		29.13	■■■□□ 2.25
KIFC3-223	ENST00000565684	HTRA3	P83110	453 aa		29.12	■■■□□ 2.25
KIFC3-223	ENST00000565684	KSR2	Q6VAB6	950 aa		29.12	■■■□□ 2.25
KIFC3-223	ENST00000565684	LARGE2	Q8N3Y3	721 aa		29.12	■■■□□ 2.25
KIFC3-223	ENST00000565684	CELF1	Q92879	486 aa	Known RBP	29.12	■■■□□ 2.25
KIFC3-223	ENST00000565684	PCCA	P05165	728 aa	Predicted RBP	29.11	■■■□□ 2.25
KIFC3-223	ENST00000565684	IGKV5-2	P06315	115 aa		29.11	■■■□□ 2.25
KIFC3-223	ENST00000565684	AOC3	Q16853	763 aa		29.11	■■■□□ 2.25
KIFC3-223	ENST00000565684	DNAJC5G	Q8N7S2	189 aa		29.11	■■■□□ 2.25
KIFC3-223	ENST00000565684	TAF1D	Q9H5J8	278 aa	Predicted RBP	29.11	■■■□□ 2.25
KIFC3-223	ENST00000565684	CWC25	Q9NXE8	425 aa	Predicted RBP	29.11	■■■□□ 2.25
KIFC3-223	ENST00000565684	IQCA1L	A6NCM1	817 aa		29.1	■■■□□ 2.25
KIFC3-223	ENST00000565684	SLC4A2	P04920	1241 aa		29.1	■■■□□ 2.25
KIFC3-223	ENST00000565684	EXOSC9	Q06265	439 aa	Known RBP	29.1	■■■□□ 2.25
KIFC3-223	ENST00000565684	GPC2	Q8N158	579 aa		29.1	■■■□□ 2.25
KIFC3-223	ENST00000565684	TMX4	Q9H1E5	349 aa	Predicted RBP	29.1	■■■□□ 2.25
KIFC3-223	ENST00000565684	PPIP5K2	O43314	1243 aa		29.09	■■■□□ 2.25
KIFC3-223	ENST00000565684	VAMP4	O75379	141 aa		29.09	■■■□□ 2.25
KIFC3-223	ENST00000565684	DPP8	Q6V1X1	898 aa	Predicted RBP	29.09	■■■□□ 2.25
KIFC3-223	ENST00000565684	MPND	Q8N594	471 aa		29.09	■■■□□ 2.25
KIFC3-223	ENST00000565684	JARID2	Q92833	1246 aa	Predicted RBP	29.09	■■■□□ 2.25
KIFC3-223	ENST00000565684	TMC4	Q7Z404	712 aa		29.08	■■■□□ 2.25
KIFC3-223	ENST00000565684	VPS33B	Q9H267	617 aa		29.08	■■■□□ 2.25
KIFC3-223	ENST00000565684	SUPT20H	Q8NEM7	779 aa		29.07	■■■□□ 2.24
KIFC3-223	ENST00000565684	ZNF521	Q96K83	1311 aa		29.07	■■■□□ 2.24
KIFC3-223	ENST00000565684	SPEF2	Q9C093	1822 aa		29.07	■■■□□ 2.24
KIFC3-223	ENST00000565684	EIF6	P56537	245 aa	Known RBP	29.06	■■■□□ 2.24
KIFC3-223	ENST00000565684	FLII	Q13045	1269 aa		29.06	■■■□□ 2.24
KIFC3-223	ENST00000565684	CHADL	Q6NUI6	762 aa		29.06	■■■□□ 2.24
KIFC3-223	ENST00000565684	NIM1K	Q8IY84	436 aa		29.06	■■■□□ 2.24
KIFC3-223	ENST00000565684	HACL1	Q9UJ83	578 aa		29.06	■■■□□ 2.24
KIFC3-223	ENST00000565684	CDHR2	Q9BYE9	1310 aa		29.05	■■■□□ 2.24
KIFC3-223	ENST00000565684	CWF19L2	Q2TBE0	894 aa	Known RBP	29.05	■■■□□ 2.24
KIFC3-223	ENST00000565684	PDE8A	O60658	829 aa		29.04	■■■□□ 2.24
KIFC3-223	ENST00000565684	KIAA2012	Q0VF49	1180 aa		29.04	■■■□□ 2.24
KIFC3-223	ENST00000565684	SEC31B	Q9NQW1	1179 aa		29.04	■■■□□ 2.24
KIFC3-223	ENST00000565684	GJA3	Q9Y6H8	435 aa		29.04	■■■□□ 2.24
KIFC3-223	ENST00000565684	NEURL1B	A8MQ27	555 aa		29.03	■■■□□ 2.24
KIFC3-223	ENST00000565684	EPHX2	P34913	555 aa		29.03	■■■□□ 2.24
KIFC3-223	ENST00000565684	SCNN1D	P51172	638 aa		29.02	■■■□□ 2.24
KIFC3-223	ENST00000565684	LDHD	Q86WU2	507 aa		29.02	■■■□□ 2.24
KIFC3-223	ENST00000565684	PCNT	O95613	3336 aa		29.01	■■■□□ 2.23
KIFC3-223	ENST00000565684	HSP90B1	P14625	803 aa	Known RBP	29.01	■■■□□ 2.23
KIFC3-223	ENST00000565684	RPS8	P62241	208 aa	Known RBP	29.01	■■■□□ 2.23
KIFC3-223	ENST00000565684	NEXN	Q0ZGT2	675 aa		29.01	■■■□□ 2.23
KIFC3-223	ENST00000565684	MYH16	Q9H6N6	1097 aa		29.01	■■■□□ 2.23
KIFC3-223	ENST00000565684	ZNRF3	Q9ULT6	936 aa		29.01	■■■□□ 2.23
KIFC3-223	ENST00000565684	GPSM2	P81274	684 aa		29	■■■□□ 2.23
KIFC3-223	ENST00000565684	CXCL9	Q07325	125 aa		28.99	■■■□□ 2.23
KIFC3-223	ENST00000565684	FKBP5	Q13451	457 aa	Predicted RBP	28.99	■■■□□ 2.23
KIFC3-223	ENST00000565684	CCDC152	Q4G0S7	254 aa		28.99	■■■□□ 2.23
KIFC3-223	ENST00000565684	EAPP	Q56P03	285 aa	Predicted RBP	28.99	■■■□□ 2.23
KIFC3-223	ENST00000565684	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.99	■■■□□ 2.23
KIFC3-223	ENST00000565684	POLL	Q9UGP5	575 aa		28.98	■■■□□ 2.23
KIFC3-223	ENST00000565684	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.98	■■■□□ 2.23
KIFC3-223	ENST00000565684	CTSW	P56202	376 aa		28.97	■■■□□ 2.23
KIFC3-223	ENST00000565684	DNAAF4	Q8WXU2	420 aa		28.97	■■■□□ 2.23
KIFC3-223	ENST00000565684	KLRG1	Q96E93	195 aa		28.97	■■■□□ 2.23
KIFC3-223	ENST00000565684	PASK	Q96RG2	1323 aa		28.96	■■■□□ 2.23
KIFC3-223	ENST00000565684	YDJC	A8MPS7	323 aa		28.96	■■■□□ 2.23
KIFC3-223	ENST00000565684		H7C1W4	665 aa		28.96	■■■□□ 2.23
KIFC3-223	ENST00000565684	EPS15	P42566	896 aa		28.96	■■■□□ 2.23
KIFC3-223	ENST00000565684	PNMA8A	Q86V59	439 aa	Predicted RBP	28.96	■■■□□ 2.23
KIFC3-223	ENST00000565684	GCKR	Q14397	625 aa		28.95	■■■□□ 2.22
KIFC3-223	ENST00000565684	SCN9A	Q15858	1988 aa		28.95	■■■□□ 2.22
KIFC3-223	ENST00000565684	CASP7	P55210	303 aa		28.94	■■■□□ 2.22
KIFC3-223	ENST00000565684	UBE3B	Q7Z3V4	1068 aa		28.94	■■■□□ 2.22
KIFC3-223	ENST00000565684	TTLL11	Q8NHH1	800 aa		28.94	■■■□□ 2.22
KIFC3-223	ENST00000565684	TBC1D16	Q8TBP0	767 aa		28.94	■■■□□ 2.22
KIFC3-223	ENST00000565684	GPR101	Q96P66	508 aa	Predicted RBP	28.94	■■■□□ 2.22
KIFC3-223	ENST00000565684	PODXL2	Q9NZ53	605 aa		28.94	■■■□□ 2.22
KIFC3-223	ENST00000565684	RTL9	Q8NET4	1388 aa		28.93	■■■□□ 2.22
KIFC3-223	ENST00000565684	PSME4	Q14997	1843 aa		28.93	■■■□□ 2.22
KIFC3-223	ENST00000565684	ITGBL1	O95965	494 aa	Predicted RBP	28.93	■■■□□ 2.22
KIFC3-223	ENST00000565684	LMOD1	P29536	600 aa	Predicted RBP	28.93	■■■□□ 2.22
KIFC3-223	ENST00000565684	WASHC4	Q2M389	1173 aa		28.93	■■■□□ 2.22
KIFC3-223	ENST00000565684	LINS1	Q8NG48	757 aa		28.93	■■■□□ 2.22
KIFC3-223	ENST00000565684	C6orf229	H3BNL8	230 aa		28.92	■■■□□ 2.22
KIFC3-223	ENST00000565684	RAD17	O75943	681 aa		28.92	■■■□□ 2.22
KIFC3-223	ENST00000565684	GREM2	Q9H772	168 aa		28.92	■■■□□ 2.22
KIFC3-223	ENST00000565684	GPRC5D	Q9NZD1	345 aa		28.92	■■■□□ 2.22
KIFC3-223	ENST00000565684		F6X3S4	739 aa		28.91	■■■□□ 2.22
KIFC3-223	ENST00000565684	CIAPIN1	Q6FI81	312 aa		28.91	■■■□□ 2.22
KIFC3-223	ENST00000565684	CLEC11A	Q9Y240	323 aa		28.91	■■■□□ 2.22
KIFC3-223	ENST00000565684	RIMBP2	O15034	1052 aa		28.9	■■■□□ 2.22
KIFC3-223	ENST00000565684	GMPS	P49915	693 aa	Predicted RBP	28.9	■■■□□ 2.22
KIFC3-223	ENST00000565684	MAP1S	Q66K74	1059 aa	Predicted RBP	28.9	■■■□□ 2.22
KIFC3-223	ENST00000565684	ANKRD18A	Q8IVF6	992 aa		28.9	■■■□□ 2.22
KIFC3-223	ENST00000565684	JMY	Q8N9B5	988 aa		28.9	■■■□□ 2.22
KIFC3-223	ENST00000565684	DBNDD1	Q9H9R9	158 aa		28.9	■■■□□ 2.22
KIFC3-223	ENST00000565684		A0A1B0GUL6	1792 aa		28.89	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms