RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 FAM89AQ96GI7 184 aa21.42■■□□□ 1.02
USB1-211ENST00000565662 MYD88Q99836 296 aa21.42■■□□□ 1.02
USB1-211ENST00000565662 CDHR2Q9BYE9 1310 aa21.42■■□□□ 1.02
USB1-211ENST00000565662 C3orf67Q6ZVT6 689 aa21.41■■□□□ 1.02
USB1-211ENST00000565662 PNMA8AQ86V59 439 aaPredicted RBP21.41■■□□□ 1.02
USB1-211ENST00000565662 MPNDQ8N594 471 aa21.41■■□□□ 1.02
USB1-211ENST00000565662 MYH3P11055 1940 aa21.4■■□□□ 1.02
USB1-211ENST00000565662 PDE8AO60658 829 aa21.4■■□□□ 1.02
USB1-211ENST00000565662 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
USB1-211ENST00000565662 PPIP5K2O43314 1243 aa21.39■■□□□ 1.01
USB1-211ENST00000565662 DDNO94850 711 aaPredicted RBP21.39■■□□□ 1.01
USB1-211ENST00000565662 SLC4A2P04920 1241 aa21.39■■□□□ 1.01
USB1-211ENST00000565662 HACL1Q9UJ83 578 aa21.39■■□□□ 1.01
USB1-211ENST00000565662 PI4KAP2A4QPH2 592 aa21.38■■□□□ 1.01
USB1-211ENST00000565662 LMOD1P29536 600 aaPredicted RBP21.38■■□□□ 1.01
USB1-211ENST00000565662 FLIIQ13045 1269 aa21.38■■□□□ 1.01
USB1-211ENST00000565662 OLFM4Q6UX06 510 aa21.38■■□□□ 1.01
USB1-211ENST00000565662 LDHDQ86WU2 507 aa21.38■■□□□ 1.01
USB1-211ENST00000565662 PI4KAP1Q8N8J0 262 aa21.38■■□□□ 1.01
USB1-211ENST00000565662 EYA3Q99504 573 aa21.37■■□□□ 1.01
USB1-211ENST00000565662 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
USB1-211ENST00000565662 KIAA2012Q0VF49 1180 aa21.36■■□□□ 1.01
USB1-211ENST00000565662 FKBP5Q13451 457 aaPredicted RBP21.36■■□□□ 1.01
USB1-211ENST00000565662 CHADLQ6NUI6 762 aa21.36■■□□□ 1.01
USB1-211ENST00000565662 CDC5LQ99459 802 aaKnown RBP21.36■■□□□ 1.01
USB1-211ENST00000565662 ZNF541Q9H0D2 1346 aa21.35■■□□□ 1.01
USB1-211ENST00000565662 POTECB2RU33 542 aa21.35■■□□□ 1.01
USB1-211ENST00000565662 ZNF428Q96B54 188 aa21.35■■□□□ 1.01
USB1-211ENST00000565662 TAF1DQ9H5J8 278 aaPredicted RBP21.35■■□□□ 1.01
USB1-211ENST00000565662 ZNRF3Q9ULT6 936 aa21.35■■□□□ 1.01
USB1-211ENST00000565662 RTL9Q8NET4 1388 aa21.35■■□□□ 1.01
USB1-211ENST00000565662 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
USB1-211ENST00000565662 VAMP4O75379 141 aa21.34■■□□□ 1.01
USB1-211ENST00000565662 RPS8P62241 208 aaKnown RBP21.34■■□□□ 1.01
USB1-211ENST00000565662 EXOSC9Q06265 439 aaKnown RBP21.34■■□□□ 1.01
USB1-211ENST00000565662 DNAAF4Q8WXU2 420 aa21.34■■□□□ 1.01
USB1-211ENST00000565662 SALL2Q9Y467 1007 aaPredicted RBP21.34■■□□□ 1.01
USB1-211ENST00000565662 E9PSI1 815 aa21.33■■□□□ 1.01
USB1-211ENST00000565662 EPHX2P34913 555 aa21.33■■□□□ 1.01
USB1-211ENST00000565662 TNIP1Q15025 636 aa21.33■■□□□ 1.01
USB1-211ENST00000565662 LINS1Q8NG48 757 aa21.33■■□□□ 1.01
USB1-211ENST00000565662 ZNF521Q96K83 1311 aa21.32■■□□□ 1
USB1-211ENST00000565662 NEURL1BA8MQ27 555 aa21.32■■□□□ 1
USB1-211ENST00000565662 CTSWP56202 376 aa21.32■■□□□ 1
USB1-211ENST00000565662 AOC3Q16853 763 aa21.32■■□□□ 1
USB1-211ENST00000565662 PODXL2Q9NZ53 605 aa21.32■■□□□ 1
USB1-211ENST00000565662 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
USB1-211ENST00000565662 ANKRD18AQ8IVF6 992 aa21.31■■□□□ 1
USB1-211ENST00000565662 LTBP1Q14766 1721 aa21.31■■□□□ 1
USB1-211ENST00000565662 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
USB1-211ENST00000565662 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
USB1-211ENST00000565662 IGKV5-2P06315 115 aa21.3■■□□□ 1
USB1-211ENST00000565662 WASHC4Q2M389 1173 aa21.3■■□□□ 1
USB1-211ENST00000565662 CELF1Q92879 486 aaKnown RBP21.3■■□□□ 1
USB1-211ENST00000565662 PLA2G12BQ9BX93 195 aa21.3■■□□□ 1
USB1-211ENST00000565662 NSFL1CQ9UNZ2 370 aaKnown RBP21.3■■□□□ 1
USB1-211ENST00000565662 TAF1P21675 1872 aa21.29■■□□□ 1
USB1-211ENST00000565662 CIAPIN1Q6FI81 312 aa21.29■■□□□ 1
USB1-211ENST00000565662 USP50Q70EL3 339 aaPredicted RBP21.29■■□□□ 1
USB1-211ENST00000565662 GJA3Q9Y6H8 435 aa21.29■■□□□ 1
USB1-211ENST00000565662 COL4A5P29400 1685 aa21.28■■□□□ 1
USB1-211ENST00000565662 GCKRQ14397 625 aa21.28■■□□□ 1
USB1-211ENST00000565662 XDHP47989 1333 aa21.28■■□□□ 1
USB1-211ENST00000565662 CEP350Q5VT06 3117 aa21.27■■□□□ 1
USB1-211ENST00000565662 H7C1W4 665 aa21.27■■□□□ 1
USB1-211ENST00000565662 EAPPQ56P03 285 aaPredicted RBP21.27■■□□□ 1
USB1-211ENST00000565662 KLRG1Q96E93 195 aa21.27■■□□□ 1
USB1-211ENST00000565662 CREBZFQ9NS37 354 aa21.27■■□□□ 1
USB1-211ENST00000565662 ANKIB1Q9P2G1 1089 aa21.27■■□□□ 1
USB1-211ENST00000565662 GGA1Q9UJY5 639 aa21.27■■□□□ 1
USB1-211ENST00000565662 C6orf229H3BNL8 230 aa21.26■□□□□ 0.99
USB1-211ENST00000565662 CT47B1P0C2W7 299 aaPredicted RBP21.26■□□□□ 0.99
USB1-211ENST00000565662 CWF19L2Q2TBE0 894 aaKnown RBP21.26■□□□□ 0.99
USB1-211ENST00000565662 G2E3Q7L622 706 aa21.26■□□□□ 0.99
USB1-211ENST00000565662 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
USB1-211ENST00000565662 ZC3H12CQ9C0D7 883 aaKnown RBP21.26■□□□□ 0.99
USB1-211ENST00000565662 ADARB2Q9NS39 739 aaKnown RBP21.26■□□□□ 0.99
USB1-211ENST00000565662 RPS12P25398 132 aaKnown RBP21.25■□□□□ 0.99
USB1-211ENST00000565662 IGHMBP2P38935 993 aaKnown RBP21.25■□□□□ 0.99
USB1-211ENST00000565662 BSDC1Q9NW68 430 aaPredicted RBP21.25■□□□□ 0.99
USB1-211ENST00000565662 CLEC11AQ9Y240 323 aa21.25■□□□□ 0.99
USB1-211ENST00000565662 G3V3G9 751 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 ATP2B4P23634 1241 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 SCNN1DP51172 638 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 DCAF8Q5TAQ9 597 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 BCL2L13Q9BXK5 485 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 GPRC5DQ9NZD1 345 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 PTPRCP08575 1304 aa21.24■□□□□ 0.99
USB1-211ENST00000565662 ZNF609O15014 1411 aa21.23■□□□□ 0.99
USB1-211ENST00000565662 ALDH1L1O75891 902 aa21.23■□□□□ 0.99
USB1-211ENST00000565662 GPSM2P81274 684 aa21.23■□□□□ 0.99
USB1-211ENST00000565662 CXCL9Q07325 125 aa21.23■□□□□ 0.99
USB1-211ENST00000565662 TBC1D16Q8TBP0 767 aa21.23■□□□□ 0.99
USB1-211ENST00000565662 DPF2Q92785 391 aa21.23■□□□□ 0.99
USB1-211ENST00000565662 UFL1O94874 794 aa21.22■□□□□ 0.99
USB1-211ENST00000565662 DNAJC5GQ8N7S2 189 aa21.22■□□□□ 0.99
USB1-211ENST00000565662 ZC3H15Q8WU90 426 aaKnown RBP21.22■□□□□ 0.99
USB1-211ENST00000565662 SPINK5Q9NQ38 1064 aaPredicted RBP21.22■□□□□ 0.99
USB1-211ENST00000565662 SEC31BQ9NQW1 1179 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms