RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 PPIP5K2O43314 1243 aa15.05■□□□□ -0
CAPN3-215ENST00000565559 KIF23Q02241 960 aaPredicted RBP15.05■□□□□ -0
CAPN3-215ENST00000565559 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
CAPN3-215ENST00000565559 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ -0
CAPN3-215ENST00000565559 CDHR2Q9BYE9 1310 aa15.05■□□□□ -0
CAPN3-215ENST00000565559 NPC1L1Q9UHC9 1359 aa15.04■□□□□ -0
CAPN3-215ENST00000565559 HMOX1P09601 288 aa15.04■□□□□ -0
CAPN3-215ENST00000565559 GMPSP49915 693 aaPredicted RBP15.04■□□□□ -0
CAPN3-215ENST00000565559 RNF25Q96BH1 459 aaPredicted RBP15.04■□□□□ -0
CAPN3-215ENST00000565559 BCL2L13Q9BXK5 485 aa15.04■□□□□ -0
CAPN3-215ENST00000565559 FAM155AB1AL88 458 aaPredicted RBP15.03■□□□□ -0
CAPN3-215ENST00000565559 ZNF157P51786 506 aaPredicted RBP15.03■□□□□ -0
CAPN3-215ENST00000565559 CRY2Q49AN0 593 aa15.03■□□□□ -0
CAPN3-215ENST00000565559 ZNF467Q7Z7K2 595 aaPredicted RBP15.03■□□□□ -0
CAPN3-215ENST00000565559 C2orf69Q8N8R5 385 aa15.03■□□□□ -0
CAPN3-215ENST00000565559 VPS33BQ9H267 617 aa15.03■□□□□ -0
CAPN3-215ENST00000565559 HDAC9Q9UKV0 1011 aa15.03■□□□□ -0
CAPN3-215ENST00000565559 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
CAPN3-215ENST00000565559 USP48Q86UV5 1035 aa15.02■□□□□ -0
CAPN3-215ENST00000565559 NYXQ9GZU5 481 aa15.02■□□□□ -0
CAPN3-215ENST00000565559 PPEF1O14829 653 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-215ENST00000565559 CXCL9Q07325 125 aa15.01□□□□□ -0.01
CAPN3-215ENST00000565559 TNIP1Q15025 636 aa15.01□□□□□ -0.01
CAPN3-215ENST00000565559 AOC3Q16853 763 aa15.01□□□□□ -0.01
CAPN3-215ENST00000565559 GBA2Q9HCG7 927 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-215ENST00000565559 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
CAPN3-215ENST00000565559 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
CAPN3-215ENST00000565559 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
CAPN3-215ENST00000565559 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
CAPN3-215ENST00000565559 KIF7Q2M1P5 1343 aa14.99□□□□□ -0.01
CAPN3-215ENST00000565559 GNAT3A8MTJ3 354 aa14.99□□□□□ -0.01
CAPN3-215ENST00000565559 H7C1D1 291 aa14.99□□□□□ -0.01
CAPN3-215ENST00000565559 HOXA10P31260 410 aaPredicted RBP14.99□□□□□ -0.01
CAPN3-215ENST00000565559 HIRAP54198 1017 aaPredicted RBP14.99□□□□□ -0.01
CAPN3-215ENST00000565559 BMP2KQ9NSY1 1161 aaPredicted RBP14.99□□□□□ -0.01
CAPN3-215ENST00000565559 BTBD11A6QL63 1104 aa14.98□□□□□ -0.01
CAPN3-215ENST00000565559 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
CAPN3-215ENST00000565559 KRT26Q7Z3Y9 468 aa14.98□□□□□ -0.01
CAPN3-215ENST00000565559 TRPM4Q8TD43 1214 aa14.98□□□□□ -0.01
CAPN3-215ENST00000565559 CRAMP1Q96RY5 1269 aa14.98□□□□□ -0.01
CAPN3-215ENST00000565559 CSRNP1Q96S65 589 aa14.98□□□□□ -0.01
CAPN3-215ENST00000565559 PANK3Q9H999 370 aa14.98□□□□□ -0.01
CAPN3-215ENST00000565559 USP16Q9Y5T5 823 aa14.98□□□□□ -0.01
CAPN3-215ENST00000565559 RIOK3O14730 519 aaKnown RBP14.97□□□□□ -0.01
CAPN3-215ENST00000565559 SLC10A3P09131 477 aa14.97□□□□□ -0.01
CAPN3-215ENST00000565559 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
CAPN3-215ENST00000565559 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
CAPN3-215ENST00000565559 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
CAPN3-215ENST00000565559 CNOT7Q9UIV1 285 aaKnown RBP14.97□□□□□ -0.01
CAPN3-215ENST00000565559 ABCC12Q96J65 1359 aa14.97□□□□□ -0.01
CAPN3-215ENST00000565559 RAD17O75943 681 aa14.96□□□□□ -0.01
CAPN3-215ENST00000565559 FXR1P51114 621 aaKnown RBP eCLIP14.96□□□□□ -0.01
CAPN3-215ENST00000565559 TMEM106CQ9BVX2 250 aa14.96□□□□□ -0.01
CAPN3-215ENST00000565559 RIC1Q4ADV7 1423 aa14.95□□□□□ -0.02
CAPN3-215ENST00000565559 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-215ENST00000565559 SNRPA1P09661 255 aaKnown RBP14.95□□□□□ -0.02
CAPN3-215ENST00000565559 TIE1P35590 1138 aa14.95□□□□□ -0.02
CAPN3-215ENST00000565559 FBXO46Q6PJ61 603 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-215ENST00000565559 MICALL2Q8IY33 904 aa14.95□□□□□ -0.02
CAPN3-215ENST00000565559 DCPSQ96C86 337 aaKnown RBP14.95□□□□□ -0.02
CAPN3-215ENST00000565559 TTLL13PA6NNM8 815 aa14.94□□□□□ -0.02
CAPN3-215ENST00000565559 PSEN1P49768 467 aa14.94□□□□□ -0.02
CAPN3-215ENST00000565559 ATN1P54259 1190 aaPredicted RBP14.94□□□□□ -0.02
CAPN3-215ENST00000565559 HLFQ16534 295 aa14.94□□□□□ -0.02
CAPN3-215ENST00000565559 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
CAPN3-215ENST00000565559 ATP6V0A2Q9Y487 856 aa14.94□□□□□ -0.02
CAPN3-215ENST00000565559 KCNQ3O43525 872 aa14.93□□□□□ -0.02
CAPN3-215ENST00000565559 DIAPH1O60610 1272 aaKnown RBP14.93□□□□□ -0.02
CAPN3-215ENST00000565559 DLK2Q6UY11 383 aa14.93□□□□□ -0.02
CAPN3-215ENST00000565559 DPP8Q6V1X1 898 aaPredicted RBP14.93□□□□□ -0.02
CAPN3-215ENST00000565559 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
CAPN3-215ENST00000565559 AKAP11Q9UKA4 1901 aa14.93□□□□□ -0.02
CAPN3-215ENST00000565559 KIAA2012Q0VF49 1180 aa14.92□□□□□ -0.02
CAPN3-215ENST00000565559 RTFDC1Q9BY42 306 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-215ENST00000565559 IBTKQ9P2D0 1353 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-215ENST00000565559 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
CAPN3-215ENST00000565559 NBPF26B4DH59 902 aa14.91□□□□□ -0.02
CAPN3-215ENST00000565559 ADM5C9JUS6 153 aa14.91□□□□□ -0.02
CAPN3-215ENST00000565559 PDAP1Q13442 181 aaKnown RBP14.91□□□□□ -0.02
CAPN3-215ENST00000565559 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-215ENST00000565559 NBPF10Q6P3W6 841 aaKnown RBP14.91□□□□□ -0.02
CAPN3-215ENST00000565559 SAMD7Q7Z3H4 446 aa14.91□□□□□ -0.02
CAPN3-215ENST00000565559 SLC51AQ86UW1 340 aa14.91□□□□□ -0.02
CAPN3-215ENST00000565559 SULF1Q8IWU6 871 aa14.91□□□□□ -0.02
CAPN3-215ENST00000565559 DPF2Q92785 391 aa14.91□□□□□ -0.02
CAPN3-215ENST00000565559 CEMIPQ8WUJ3 1361 aa14.9□□□□□ -0.02
CAPN3-215ENST00000565559 SHTN1A0MZ66 631 aa14.9□□□□□ -0.02
CAPN3-215ENST00000565559 DLL1O00548 723 aa14.9□□□□□ -0.02
CAPN3-215ENST00000565559 TBC1D8O95759 1140 aa14.9□□□□□ -0.02
CAPN3-215ENST00000565559 TBC1D10BQ4KMP7 808 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-215ENST00000565559 RASAL3Q86YV0 1011 aa14.9□□□□□ -0.02
CAPN3-215ENST00000565559 MPNDQ8N594 471 aa14.9□□□□□ -0.02
CAPN3-215ENST00000565559 ERVV-1B6SEH8 477 aa14.89□□□□□ -0.03
CAPN3-215ENST00000565559 INTS3Q68E01 1043 aaKnown RBP14.89□□□□□ -0.03
CAPN3-215ENST00000565559 KIF6Q6ZMV9 814 aa14.89□□□□□ -0.03
CAPN3-215ENST00000565559 NLRP3Q96P20 1036 aa14.89□□□□□ -0.03
CAPN3-215ENST00000565559 SIPA1L3O60292 1781 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-215ENST00000565559 GPR25O00155 361 aa14.88□□□□□ -0.03
CAPN3-215ENST00000565559 FKBP1BP68106 108 aa14.88□□□□□ -0.03
CAPN3-215ENST00000565559 NOM1Q5C9Z4 860 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms