RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ZPR1O75312 459 aa13.87□□□□□ -0.19
SF3B3-205ENST00000564899 NBPF7P0C2Y1 421 aaPredicted RBP13.87□□□□□ -0.19
SF3B3-205ENST00000564899 GPTP24298 496 aa13.87□□□□□ -0.19
SF3B3-205ENST00000564899 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
SF3B3-205ENST00000564899 CCDC24Q8N4L8 307 aa13.87□□□□□ -0.19
SF3B3-205ENST00000564899 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
SF3B3-205ENST00000564899 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
SF3B3-205ENST00000564899 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
SF3B3-205ENST00000564899 LRRFIP2Q9Y608 721 aaKnown RBP13.87□□□□□ -0.19
SF3B3-205ENST00000564899 UTYO14607 1347 aa13.87□□□□□ -0.19
SF3B3-205ENST00000564899 SCN7AQ01118 1682 aa13.86□□□□□ -0.19
SF3B3-205ENST00000564899 NLRP10Q86W26 655 aa13.86□□□□□ -0.19
SF3B3-205ENST00000564899 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-205ENST00000564899 ZC3H4Q9UPT8 1303 aaKnown RBP13.86□□□□□ -0.19
SF3B3-205ENST00000564899 BCORQ6W2J9 1755 aa13.86□□□□□ -0.19
SF3B3-205ENST00000564899 FOXN1O15353 648 aa13.85□□□□□ -0.19
SF3B3-205ENST00000564899 SERPINB2P05120 415 aa13.85□□□□□ -0.19
SF3B3-205ENST00000564899 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
SF3B3-205ENST00000564899 CLEC4GQ6UXB4 293 aa13.85□□□□□ -0.19
SF3B3-205ENST00000564899 UBE3BQ7Z3V4 1068 aa13.85□□□□□ -0.19
SF3B3-205ENST00000564899 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
SF3B3-205ENST00000564899 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
SF3B3-205ENST00000564899 RWDD1Q9H446 243 aaPredicted RBP13.85□□□□□ -0.19
SF3B3-205ENST00000564899 H7C1W4 665 aa13.84□□□□□ -0.19
SF3B3-205ENST00000564899 HDAC1Q13547 482 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-205ENST00000564899 CENPQQ7L2Z9 268 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-205ENST00000564899 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-205ENST00000564899 TTLL6Q8N841 843 aa13.84□□□□□ -0.19
SF3B3-205ENST00000564899 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
SF3B3-205ENST00000564899 JARID2Q92833 1246 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-205ENST00000564899 SUCLG2Q96I99 432 aa13.84□□□□□ -0.19
SF3B3-205ENST00000564899 NIP7Q9Y221 180 aaKnown RBP eCLIP13.84□□□□□ -0.19
SF3B3-205ENST00000564899 FER1L6Q2WGJ9 1857 aa13.84□□□□□ -0.19
SF3B3-205ENST00000564899 UBN2Q6ZU65 1347 aa13.84□□□□□ -0.19
SF3B3-205ENST00000564899 IGHDP01880 384 aa13.83□□□□□ -0.2
SF3B3-205ENST00000564899 PCCAP05165 728 aaPredicted RBP13.83□□□□□ -0.2
SF3B3-205ENST00000564899 CASP7P55210 303 aa13.83□□□□□ -0.2
SF3B3-205ENST00000564899 PARP10Q53GL7 1025 aa13.83□□□□□ -0.2
SF3B3-205ENST00000564899 BICDL1Q6ZP65 573 aa13.83□□□□□ -0.2
SF3B3-205ENST00000564899 SIRT2Q8IXJ6 389 aa13.83□□□□□ -0.2
SF3B3-205ENST00000564899 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.2
SF3B3-205ENST00000564899 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
SF3B3-205ENST00000564899 C21orf2O43822 256 aa13.82□□□□□ -0.2
SF3B3-205ENST00000564899 HMMRO75330 724 aa13.82□□□□□ -0.2
SF3B3-205ENST00000564899 RTL5Q5HYW3 569 aaPredicted RBP13.82□□□□□ -0.2
SF3B3-205ENST00000564899 ZBTB38Q8NAP3 1195 aaPredicted RBP13.82□□□□□ -0.2
SF3B3-205ENST00000564899 TRMT112Q9UI30 125 aaKnown RBP13.82□□□□□ -0.2
SF3B3-205ENST00000564899 NUP98P52948 1817 aa13.81□□□□□ -0.2
SF3B3-205ENST00000564899 CACNA1SQ13698 1873 aa13.81□□□□□ -0.2
SF3B3-205ENST00000564899 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
SF3B3-205ENST00000564899 DDNO94850 711 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-205ENST00000564899 ATP8B2P98198 1209 aa13.81□□□□□ -0.2
SF3B3-205ENST00000564899 SUSD4Q5VX71 490 aa13.81□□□□□ -0.2
SF3B3-205ENST00000564899 TBC1D9BQ66K14 1250 aa13.81□□□□□ -0.2
SF3B3-205ENST00000564899 UTP14AQ9BVJ6 771 aaKnown RBP13.81□□□□□ -0.2
SF3B3-205ENST00000564899 BICC1Q9H694 974 aaKnown RBP13.81□□□□□ -0.2
SF3B3-205ENST00000564899 SLX4Q8IY92 1834 aa13.8□□□□□ -0.2
SF3B3-205ENST00000564899 PPP1R42Q7Z4L9 355 aa13.8□□□□□ -0.2
SF3B3-205ENST00000564899 FAM89AQ96GI7 184 aa13.8□□□□□ -0.2
SF3B3-205ENST00000564899 KAZALD1Q96I82 304 aa13.8□□□□□ -0.2
SF3B3-205ENST00000564899 SETDB2Q96T68 719 aa13.8□□□□□ -0.2
SF3B3-205ENST00000564899 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
SF3B3-205ENST00000564899 CDHR2Q9BYE9 1310 aa13.8□□□□□ -0.2
SF3B3-205ENST00000564899 PNMA6EA0A0J9YXQ4 647 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 SRGAP3O43295 1099 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 NTSR2O95665 410 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 MTX1Q13505 466 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 ERFEQ4G0M1 354 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 EPHA10Q5JZY3 1008 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 ZNF622Q969S3 477 aaKnown RBP eCLIP13.79□□□□□ -0.2
SF3B3-205ENST00000564899 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
SF3B3-205ENST00000564899 H0YIN7 160 aa13.78□□□□□ -0.2
SF3B3-205ENST00000564899 IRS4O14654 1257 aaPredicted RBP13.78□□□□□ -0.2
SF3B3-205ENST00000564899 RABL6Q3YEC7 729 aaPredicted RBP13.78□□□□□ -0.2
SF3B3-205ENST00000564899 PRR5LQ6MZQ0 368 aa13.78□□□□□ -0.2
SF3B3-205ENST00000564899 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
SF3B3-205ENST00000564899 PASKQ96RG2 1323 aa13.78□□□□□ -0.2
SF3B3-205ENST00000564899 VEGFBP49765 207 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 FOXO4P98177 505 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 POLA2Q14181 598 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 SMC5Q8IY18 1101 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 SSH3Q8TE77 659 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 GCC1Q96CN9 775 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 NYXQ9GZU5 481 aa13.77□□□□□ -0.21
SF3B3-205ENST00000564899 HSP90B1P14625 803 aaKnown RBP13.76□□□□□ -0.21
SF3B3-205ENST00000564899 LMBR1LQ6UX01 489 aa13.76□□□□□ -0.21
SF3B3-205ENST00000564899 NBPF5PQ86XG9 351 aaPredicted RBP13.76□□□□□ -0.21
SF3B3-205ENST00000564899 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
SF3B3-205ENST00000564899 DCTPP1Q9H773 170 aa13.76□□□□□ -0.21
SF3B3-205ENST00000564899 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
SF3B3-205ENST00000564899 PDE8AO60658 829 aa13.75□□□□□ -0.21
SF3B3-205ENST00000564899 SLC34A2O95436 690 aa13.75□□□□□ -0.21
SF3B3-205ENST00000564899 GTF2E1P29083 439 aaPredicted RBP13.75□□□□□ -0.21
SF3B3-205ENST00000564899 CTSWP56202 376 aa13.75□□□□□ -0.21
SF3B3-205ENST00000564899 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
SF3B3-205ENST00000564899 OLFM4Q6UX06 510 aa13.75□□□□□ -0.21
SF3B3-205ENST00000564899 ADAMTSL1Q8N6G6 1762 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms