RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ZNF428Q96B54 188 aa23.99■■□□□ 1.43
CLN6-204ENST00000564752 CNTNAP1P78357 1384 aa23.99■■□□□ 1.43
CLN6-204ENST00000564752 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
CLN6-204ENST00000564752 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
CLN6-204ENST00000564752 ZNRF3Q9ULT6 936 aa23.98■■□□□ 1.43
CLN6-204ENST00000564752 ADAMTSL1Q8N6G6 1762 aa23.98■■□□□ 1.43
CLN6-204ENST00000564752 ATP5J2-PTCD1G3V325 749 aa23.97■■□□□ 1.43
CLN6-204ENST00000564752 GNAI1P63096 354 aa23.97■■□□□ 1.43
CLN6-204ENST00000564752 TRIM28Q13263 835 aaKnown RBP23.97■■□□□ 1.43
CLN6-204ENST00000564752 FAM89AQ96GI7 184 aa23.97■■□□□ 1.43
CLN6-204ENST00000564752 CALD1Q05682 793 aaKnown RBP23.96■■□□□ 1.43
CLN6-204ENST00000564752 TMC4Q7Z404 712 aa23.96■■□□□ 1.43
CLN6-204ENST00000564752 CXCL9Q07325 125 aa23.95■■□□□ 1.42
CLN6-204ENST00000564752 KIAA2012Q0VF49 1180 aa23.95■■□□□ 1.42
CLN6-204ENST00000564752 SF3B3Q15393 1217 aaKnown RBP23.95■■□□□ 1.42
CLN6-204ENST00000564752 USP50Q70EL3 339 aaPredicted RBP23.95■■□□□ 1.42
CLN6-204ENST00000564752 ANKRD36CQ5JPF3 1778 aa23.95■■□□□ 1.42
CLN6-204ENST00000564752 MRS2Q9HD23 443 aa23.94■■□□□ 1.42
CLN6-204ENST00000564752 ELL2O00472 640 aaPredicted RBP23.93■■□□□ 1.42
CLN6-204ENST00000564752 VEGFBP49765 207 aa23.93■■□□□ 1.42
CLN6-204ENST00000564752 PHAXQ9H814 394 aaKnown RBP23.93■■□□□ 1.42
CLN6-204ENST00000564752 GPRC5DQ9NZD1 345 aa23.93■■□□□ 1.42
CLN6-204ENST00000564752 LTBP1Q14766 1721 aa23.93■■□□□ 1.42
CLN6-204ENST00000564752 RIC3Q7Z5B4 369 aa23.92■■□□□ 1.42
CLN6-204ENST00000564752 RTL5Q5HYW3 569 aaPredicted RBP23.91■■□□□ 1.42
CLN6-204ENST00000564752 C8orf58Q8NAV2 365 aa23.91■■□□□ 1.42
CLN6-204ENST00000564752 CELF1Q92879 486 aaKnown RBP23.91■■□□□ 1.42
CLN6-204ENST00000564752 ADARB2Q9NS39 739 aaKnown RBP23.91■■□□□ 1.42
CLN6-204ENST00000564752 RASSF10A6NK89 507 aa23.9■■□□□ 1.42
CLN6-204ENST00000564752 IRS4O14654 1257 aaPredicted RBP23.9■■□□□ 1.42
CLN6-204ENST00000564752 GOLGA2Q08379 1002 aa23.9■■□□□ 1.42
CLN6-204ENST00000564752 DEFB115Q30KQ5 88 aa23.9■■□□□ 1.42
CLN6-204ENST00000564752 CIAPIN1Q6FI81 312 aa23.9■■□□□ 1.42
CLN6-204ENST00000564752 LAMB2P55268 1798 aa23.9■■□□□ 1.42
CLN6-204ENST00000564752 GMPSP49915 693 aaPredicted RBP23.89■■□□□ 1.41
CLN6-204ENST00000564752 TNIP1Q15025 636 aa23.89■■□□□ 1.41
CLN6-204ENST00000564752 RAD17O75943 681 aa23.88■■□□□ 1.41
CLN6-204ENST00000564752 ZBTB38Q8NAP3 1195 aaPredicted RBP23.88■■□□□ 1.41
CLN6-204ENST00000564752 YDJCA8MPS7 323 aa23.87■■□□□ 1.41
CLN6-204ENST00000564752 FMR1Q06787 632 aaKnown RBP eCLIP23.87■■□□□ 1.41
CLN6-204ENST00000564752 CHMP4AQ9BY43 222 aa23.87■■□□□ 1.41
CLN6-204ENST00000564752 NSFL1CQ9UNZ2 370 aaKnown RBP23.87■■□□□ 1.41
CLN6-204ENST00000564752 RPS8P62241 208 aaKnown RBP23.86■■□□□ 1.41
CLN6-204ENST00000564752 WASHC4Q2M389 1173 aa23.86■■□□□ 1.41
CLN6-204ENST00000564752 MYD88Q99836 296 aa23.86■■□□□ 1.41
CLN6-204ENST00000564752 ABT1Q9ULW3 272 aaKnown RBP23.86■■□□□ 1.41
CLN6-204ENST00000564752 CDHR2Q9BYE9 1310 aa23.85■■□□□ 1.41
CLN6-204ENST00000564752 FOXN1O15353 648 aa23.85■■□□□ 1.41
CLN6-204ENST00000564752 GPSM2P81274 684 aa23.85■■□□□ 1.41
CLN6-204ENST00000564752 CCDC30Q5VVM6 783 aa23.85■■□□□ 1.41
CLN6-204ENST00000564752 CCDC191Q8NCU4 936 aa23.85■■□□□ 1.41
CLN6-204ENST00000564752 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
CLN6-204ENST00000564752 POLLQ9UGP5 575 aa23.85■■□□□ 1.41
CLN6-204ENST00000564752 TRAF5O00463 557 aa23.84■■□□□ 1.41
CLN6-204ENST00000564752 HSP90B1P14625 803 aaKnown RBP23.84■■□□□ 1.41
CLN6-204ENST00000564752 CST9Q5W186 159 aa23.84■■□□□ 1.41
CLN6-204ENST00000564752 TSPYL6Q8N831 410 aa23.84■■□□□ 1.41
CLN6-204ENST00000564752 AIDAQ96BJ3 306 aa23.84■■□□□ 1.41
CLN6-204ENST00000564752 PGAP2Q9UHJ9 254 aa23.84■■□□□ 1.41
CLN6-204ENST00000564752 DDX60Q8IY21 1712 aaKnown RBP23.84■■□□□ 1.41
CLN6-204ENST00000564752 TAF1P21675 1872 aa23.83■■□□□ 1.41
CLN6-204ENST00000564752 DUOX1Q9NRD9 1551 aa23.83■■□□□ 1.41
CLN6-204ENST00000564752 PCCAP05165 728 aaPredicted RBP23.83■■□□□ 1.41
CLN6-204ENST00000564752 METTL22Q9BUU2 404 aaPredicted RBP23.83■■□□□ 1.41
CLN6-204ENST00000564752 WBP1LQ9NX94 342 aa23.83■■□□□ 1.41
CLN6-204ENST00000564752 WDR33Q9C0J8 1336 aaKnown RBP23.83■■□□□ 1.4
CLN6-204ENST00000564752 C6orf229H3BNL8 230 aa23.82■■□□□ 1.4
CLN6-204ENST00000564752 DDX58O95786 925 aaKnown RBP23.82■■□□□ 1.4
CLN6-204ENST00000564752 HIRAP54198 1017 aaPredicted RBP23.82■■□□□ 1.4
CLN6-204ENST00000564752 CCDC27Q2M243 656 aa23.82■■□□□ 1.4
CLN6-204ENST00000564752 SEC31BQ9NQW1 1179 aa23.82■■□□□ 1.4
CLN6-204ENST00000564752 CWC25Q9NXE8 425 aaPredicted RBP23.82■■□□□ 1.4
CLN6-204ENST00000564752 CNOT7Q9UIV1 285 aaKnown RBP23.82■■□□□ 1.4
CLN6-204ENST00000564752 RIMBP2O15034 1052 aa23.81■■□□□ 1.4
CLN6-204ENST00000564752 ZC3H15Q8WU90 426 aaKnown RBP23.81■■□□□ 1.4
CLN6-204ENST00000564752 LRRC37AA6NMS7 1700 aa23.8■■□□□ 1.4
CLN6-204ENST00000564752 PDE8AO60658 829 aa23.8■■□□□ 1.4
CLN6-204ENST00000564752 TBC1D16Q8TBP0 767 aa23.8■■□□□ 1.4
CLN6-204ENST00000564752 DPF2Q92785 391 aa23.8■■□□□ 1.4
CLN6-204ENST00000564752 TSR2Q969E8 191 aaKnown RBP23.8■■□□□ 1.4
CLN6-204ENST00000564752 EYA3Q99504 573 aa23.8■■□□□ 1.4
CLN6-204ENST00000564752 DBNDD1Q9H9R9 158 aa23.8■■□□□ 1.4
CLN6-204ENST00000564752 PODXL2Q9NZ53 605 aa23.8■■□□□ 1.4
CLN6-204ENST00000564752 COL4A1P02462 1669 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 SHTN1A0MZ66 631 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 H7C1D1 291 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 PSMD14O00487 310 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 CTCFP49711 727 aaPredicted RBP23.79■■□□□ 1.4
CLN6-204ENST00000564752 CCDC152Q4G0S7 254 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 WWC1Q8IX03 1113 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 TRPM4Q8TD43 1214 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 JARID2Q92833 1246 aaPredicted RBP23.79■■□□□ 1.4
CLN6-204ENST00000564752 PRDM10Q9NQV6 1147 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 MAP3K2Q9Y2U5 619 aa23.79■■□□□ 1.4
CLN6-204ENST00000564752 ZBTB12Q9Y330 459 aaPredicted RBP23.79■■□□□ 1.4
CLN6-204ENST00000564752 KSR2Q6VAB6 950 aa23.78■■□□□ 1.4
CLN6-204ENST00000564752 MICALL2Q8IY33 904 aa23.78■■□□□ 1.4
CLN6-204ENST00000564752 GLIS2Q9BZE0 524 aaPredicted RBP23.78■■□□□ 1.4
CLN6-204ENST00000564752 TLL2Q9Y6L7 1015 aa23.78■■□□□ 1.4
CLN6-204ENST00000564752 PI4KAP2A4QPH2 592 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms