RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 GRAPQ13588 217 aa18.99■□□□□ 0.63
RPUSD1-204ENST00000563560 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
RPUSD1-204ENST00000563560 RTFDC1Q9BY42 306 aaPredicted RBP18.99■□□□□ 0.63
RPUSD1-204ENST00000563560 ZNF277Q9NRM2 450 aaPredicted RBP18.99■□□□□ 0.63
RPUSD1-204ENST00000563560 CWC25Q9NXE8 425 aaPredicted RBP18.99■□□□□ 0.63
RPUSD1-204ENST00000563560 SCN4AP35499 1836 aa18.99■□□□□ 0.63
RPUSD1-204ENST00000563560 CWF19L2Q2TBE0 894 aaKnown RBP18.98■□□□□ 0.63
RPUSD1-204ENST00000563560 A0A1B0GUL6 1792 aa18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 ADAMTSL1Q8N6G6 1762 aa18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 H7C1W4 665 aa18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 BBOX1O75936 387 aa18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 GRIPAP1Q4V328 841 aa18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 RTL5Q5HYW3 569 aaPredicted RBP18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 SP8Q8IXZ3 490 aa18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 JARID2Q92833 1246 aaPredicted RBP18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 CELF1Q92879 486 aaKnown RBP18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 KDM2BQ8NHM5 1336 aa18.97■□□□□ 0.63
RPUSD1-204ENST00000563560 IARSP41252 1262 aaKnown RBP18.96■□□□□ 0.63
RPUSD1-204ENST00000563560 DNAAF4Q8WXU2 420 aa18.96■□□□□ 0.63
RPUSD1-204ENST00000563560 FZD9O00144 591 aa18.95■□□□□ 0.62
RPUSD1-204ENST00000563560 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
RPUSD1-204ENST00000563560 GCKRQ14397 625 aa18.95■□□□□ 0.62
RPUSD1-204ENST00000563560 DDX46Q7L014 1031 aaKnown RBP18.95■□□□□ 0.62
RPUSD1-204ENST00000563560 RTL9Q8NET4 1388 aa18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 PDE8AO60658 829 aa18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 BEND3Q5T5X7 828 aa18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 MRPL50Q8N5N7 158 aaKnown RBP18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 LINS1Q8NG48 757 aa18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 SEC31BQ9NQW1 1179 aa18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 ZNF646O15015 1829 aaPredicted RBP18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 ZNF541Q9H0D2 1346 aa18.94■□□□□ 0.62
RPUSD1-204ENST00000563560 F6X3S4 739 aa18.93■□□□□ 0.62
RPUSD1-204ENST00000563560 PLA2G12BQ9BX93 195 aa18.93■□□□□ 0.62
RPUSD1-204ENST00000563560 RRAGCQ9HB90 399 aa18.93■□□□□ 0.62
RPUSD1-204ENST00000563560 TOMM70O94826 608 aa18.92■□□□□ 0.62
RPUSD1-204ENST00000563560 TMC4Q7Z404 712 aa18.92■□□□□ 0.62
RPUSD1-204ENST00000563560 L3MBTL3Q96JM7 780 aaPredicted RBP18.92■□□□□ 0.62
RPUSD1-204ENST00000563560 PSME4Q14997 1843 aa18.92■□□□□ 0.62
RPUSD1-204ENST00000563560 SCN9AQ15858 1988 aa18.92■□□□□ 0.62
RPUSD1-204ENST00000563560 DDNO94850 711 aaPredicted RBP18.91■□□□□ 0.62
RPUSD1-204ENST00000563560 CTSWP56202 376 aa18.91■□□□□ 0.62
RPUSD1-204ENST00000563560 NEXNQ0ZGT2 675 aa18.91■□□□□ 0.62
RPUSD1-204ENST00000563560 TTLL11Q8NHH1 800 aa18.91■□□□□ 0.62
RPUSD1-204ENST00000563560 SSH1Q8WYL5 1049 aa18.91■□□□□ 0.62
RPUSD1-204ENST00000563560 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
RPUSD1-204ENST00000563560 CSF1RP07333 972 aa18.89■□□□□ 0.61
RPUSD1-204ENST00000563560 RPS8P62241 208 aaKnown RBP18.89■□□□□ 0.61
RPUSD1-204ENST00000563560 UBE3BQ7Z3V4 1068 aa18.89■□□□□ 0.61
RPUSD1-204ENST00000563560 RBM46Q8TBY0 533 aaKnown RBP18.89■□□□□ 0.61
RPUSD1-204ENST00000563560 HSP90B1P14625 803 aaKnown RBP18.88■□□□□ 0.61
RPUSD1-204ENST00000563560 VEGFAP15692 232 aaPredicted RBP18.88■□□□□ 0.61
RPUSD1-204ENST00000563560 CCDC152Q4G0S7 254 aa18.88■□□□□ 0.61
RPUSD1-204ENST00000563560 MPNDQ8N594 471 aa18.88■□□□□ 0.61
RPUSD1-204ENST00000563560 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 GPSM2P81274 684 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 KIAA2012Q0VF49 1180 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 AOC3Q16853 763 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 ALDH1L2Q3SY69 923 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 DPY19L2Q6NUT2 758 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 GREM2Q9H772 168 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 PODXL2Q9NZ53 605 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 POLLQ9UGP5 575 aa18.87■□□□□ 0.61
RPUSD1-204ENST00000563560 FOXO4P98177 505 aa18.86■□□□□ 0.61
RPUSD1-204ENST00000563560 DPP8Q6V1X1 898 aaPredicted RBP18.86■□□□□ 0.61
RPUSD1-204ENST00000563560 UTYO14607 1347 aa18.85■□□□□ 0.61
RPUSD1-204ENST00000563560 CT47B1P0C2W7 299 aaPredicted RBP18.85■□□□□ 0.61
RPUSD1-204ENST00000563560 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
RPUSD1-204ENST00000563560 KAZALD1Q96I82 304 aa18.85■□□□□ 0.61
RPUSD1-204ENST00000563560 CCDC85AQ96PX6 553 aaPredicted RBP18.85■□□□□ 0.61
RPUSD1-204ENST00000563560 PTPRCP08575 1304 aa18.84■□□□□ 0.61
RPUSD1-204ENST00000563560 YDJCA8MPS7 323 aa18.84■□□□□ 0.61
RPUSD1-204ENST00000563560 PPIP5K2O43314 1243 aa18.84■□□□□ 0.61
RPUSD1-204ENST00000563560 HSPA6P17066 643 aa18.84■□□□□ 0.61
RPUSD1-204ENST00000563560 GPC2Q8N158 579 aa18.84■□□□□ 0.61
RPUSD1-204ENST00000563560 LARGE2Q8N3Y3 721 aa18.84■□□□□ 0.61
RPUSD1-204ENST00000563560 SUPT20HQ8NEM7 779 aa18.84■□□□□ 0.61
RPUSD1-204ENST00000563560 ALDH1L1O75891 902 aa18.83■□□□□ 0.6
RPUSD1-204ENST00000563560 POTEIP0CG38 1075 aa18.83■□□□□ 0.6
RPUSD1-204ENST00000563560 POTEJP0CG39 1038 aa18.83■□□□□ 0.6
RPUSD1-204ENST00000563560 FSTL1Q12841 308 aa18.83■□□□□ 0.6
RPUSD1-204ENST00000563560 TBC1D16Q8TBP0 767 aa18.83■□□□□ 0.6
RPUSD1-204ENST00000563560 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
RPUSD1-204ENST00000563560 PCNTO95613 3336 aa18.83■□□□□ 0.6
RPUSD1-204ENST00000563560 WTIPA6NIX2 430 aaPredicted RBP18.82■□□□□ 0.6
RPUSD1-204ENST00000563560 GRM8O00222 908 aa18.82■□□□□ 0.6
RPUSD1-204ENST00000563560 SCNN1DP51172 638 aa18.82■□□□□ 0.6
RPUSD1-204ENST00000563560 BCL2L13Q9BXK5 485 aa18.82■□□□□ 0.6
RPUSD1-204ENST00000563560 TAF1DQ9H5J8 278 aaPredicted RBP18.82■□□□□ 0.6
RPUSD1-204ENST00000563560 BSDC1Q9NW68 430 aaPredicted RBP18.82■□□□□ 0.6
RPUSD1-204ENST00000563560 CXCL9Q07325 125 aa18.81■□□□□ 0.6
RPUSD1-204ENST00000563560 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
RPUSD1-204ENST00000563560 ZNRF3Q9ULT6 936 aa18.81■□□□□ 0.6
RPUSD1-204ENST00000563560 NSFL1CQ9UNZ2 370 aaKnown RBP18.81■□□□□ 0.6
RPUSD1-204ENST00000563560 NBPF7P0C2Y1 421 aaPredicted RBP18.8■□□□□ 0.6
RPUSD1-204ENST00000563560 RARSP54136 660 aaKnown RBP18.8■□□□□ 0.6
RPUSD1-204ENST00000563560 ANKRD18AQ8IVF6 992 aa18.8■□□□□ 0.6
RPUSD1-204ENST00000563560 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
RPUSD1-204ENST00000563560 GPR101Q96P66 508 aaPredicted RBP18.8■□□□□ 0.6
RPUSD1-204ENST00000563560 SRCIN1Q9C0H9 1055 aa18.8■□□□□ 0.6
RPUSD1-204ENST00000563560 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms