RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 SUPT20HQ8NEM7 779 aa27.26■■□□□ 1.95
CHD9-208ENST00000563410 HYPKQ9NX55 129 aa27.26■■□□□ 1.95
CHD9-208ENST00000563410 DUOX1Q9NRD9 1551 aa27.26■■□□□ 1.95
CHD9-208ENST00000563410 DPP8Q6V1X1 898 aaPredicted RBP27.25■■□□□ 1.95
CHD9-208ENST00000563410 MPNDQ8N594 471 aa27.25■■□□□ 1.95
CHD9-208ENST00000563410 TRPM7Q96QT4 1865 aa27.25■■□□□ 1.95
CHD9-208ENST00000563410 ATP5J2-PTCD1G3V325 749 aa27.24■■□□□ 1.95
CHD9-208ENST00000563410 FAM89AQ96GI7 184 aa27.24■■□□□ 1.95
CHD9-208ENST00000563410 COL4A1P02462 1669 aa27.24■■□□□ 1.95
CHD9-208ENST00000563410 VEGFBP49765 207 aa27.23■■□□□ 1.95
CHD9-208ENST00000563410 CXCL9Q07325 125 aa27.23■■□□□ 1.95
CHD9-208ENST00000563410 ZNRF3Q9ULT6 936 aa27.23■■□□□ 1.95
CHD9-208ENST00000563410 KIAA2012Q0VF49 1180 aa27.22■■□□□ 1.95
CHD9-208ENST00000563410 IFT57Q9NWB7 429 aa27.22■■□□□ 1.95
CHD9-208ENST00000563410 SF3B3Q15393 1217 aaKnown RBP27.21■■□□□ 1.95
CHD9-208ENST00000563410 USP50Q70EL3 339 aaPredicted RBP27.21■■□□□ 1.95
CHD9-208ENST00000563410 GPRC5DQ9NZD1 345 aa27.21■■□□□ 1.95
CHD9-208ENST00000563410 GNAI1P63096 354 aa27.2■■□□□ 1.94
CHD9-208ENST00000563410 TRIM28Q13263 835 aaKnown RBP27.2■■□□□ 1.94
CHD9-208ENST00000563410 TMC4Q7Z404 712 aa27.2■■□□□ 1.94
CHD9-208ENST00000563410 TNS4Q8IZW8 715 aa27.2■■□□□ 1.94
CHD9-208ENST00000563410 RASSF10A6NK89 507 aa27.19■■□□□ 1.94
CHD9-208ENST00000563410 FMR1Q06787 632 aaKnown RBP eCLIP27.19■■□□□ 1.94
CHD9-208ENST00000563410 CELF1Q92879 486 aaKnown RBP27.19■■□□□ 1.94
CHD9-208ENST00000563410 PHAXQ9H814 394 aaKnown RBP27.19■■□□□ 1.94
CHD9-208ENST00000563410 ELL2O00472 640 aaPredicted RBP27.18■■□□□ 1.94
CHD9-208ENST00000563410 RTL5Q5HYW3 569 aaPredicted RBP27.18■■□□□ 1.94
CHD9-208ENST00000563410 ADARB2Q9NS39 739 aaKnown RBP27.17■■□□□ 1.94
CHD9-208ENST00000563410 FOXN1O15353 648 aa27.16■■□□□ 1.94
CHD9-208ENST00000563410 GMPSP49915 693 aaPredicted RBP27.16■■□□□ 1.94
CHD9-208ENST00000563410 CALD1Q05682 793 aaKnown RBP27.16■■□□□ 1.94
CHD9-208ENST00000563410 DEFB115Q30KQ5 88 aa27.16■■□□□ 1.94
CHD9-208ENST00000563410 CIAPIN1Q6FI81 312 aa27.16■■□□□ 1.94
CHD9-208ENST00000563410 RIC3Q7Z5B4 369 aa27.16■■□□□ 1.94
CHD9-208ENST00000563410 YDJCA8MPS7 323 aa27.15■■□□□ 1.94
CHD9-208ENST00000563410 IRS4O14654 1257 aaPredicted RBP27.15■■□□□ 1.94
CHD9-208ENST00000563410 C8orf58Q8NAV2 365 aa27.15■■□□□ 1.94
CHD9-208ENST00000563410 RAD17O75943 681 aa27.14■■□□□ 1.94
CHD9-208ENST00000563410 GOLGA2Q08379 1002 aa27.14■■□□□ 1.94
CHD9-208ENST00000563410 TRAF5O00463 557 aa27.13■■□□□ 1.93
CHD9-208ENST00000563410 CDHR2Q9BYE9 1310 aa27.13■■□□□ 1.93
CHD9-208ENST00000563410 TNIP1Q15025 636 aa27.12■■□□□ 1.93
CHD9-208ENST00000563410 CCDC184Q52MB2 194 aa27.12■■□□□ 1.93
CHD9-208ENST00000563410 CST9Q5W186 159 aa27.12■■□□□ 1.93
CHD9-208ENST00000563410 ZBTB38Q8NAP3 1195 aaPredicted RBP27.12■■□□□ 1.93
CHD9-208ENST00000563410 ABT1Q9ULW3 272 aaKnown RBP27.12■■□□□ 1.93
CHD9-208ENST00000563410 MYD88Q99836 296 aa27.11■■□□□ 1.93
CHD9-208ENST00000563410 WBP1LQ9NX94 342 aa27.11■■□□□ 1.93
CHD9-208ENST00000563410 POLLQ9UGP5 575 aa27.11■■□□□ 1.93
CHD9-208ENST00000563410 NSFL1CQ9UNZ2 370 aaKnown RBP27.11■■□□□ 1.93
CHD9-208ENST00000563410 WDR33Q9C0J8 1336 aaKnown RBP27.11■■□□□ 1.93
CHD9-208ENST00000563410 THSD7BQ9C0I4 1608 aa27.1■■□□□ 1.93
CHD9-208ENST00000563410 GPSM2P81274 684 aa27.1■■□□□ 1.93
CHD9-208ENST00000563410 WASHC4Q2M389 1173 aa27.1■■□□□ 1.93
CHD9-208ENST00000563410 BCL2L13Q9BXK5 485 aa27.1■■□□□ 1.93
CHD9-208ENST00000563410 PGAP2Q9UHJ9 254 aa27.1■■□□□ 1.93
CHD9-208ENST00000563410 HIRAP54198 1017 aaPredicted RBP27.09■■□□□ 1.93
CHD9-208ENST00000563410 TSPYL6Q8N831 410 aa27.09■■□□□ 1.93
CHD9-208ENST00000563410 POLR2AP24928 1970 aaKnown RBP27.08■■□□□ 1.93
CHD9-208ENST00000563410 SCN9AQ15858 1988 aa27.08■■□□□ 1.93
CHD9-208ENST00000563410 SHTN1A0MZ66 631 aa27.08■■□□□ 1.93
CHD9-208ENST00000563410 CAPN15O75808 1086 aa27.08■■□□□ 1.93
CHD9-208ENST00000563410 RPS8P62241 208 aaKnown RBP27.08■■□□□ 1.93
CHD9-208ENST00000563410 CCDC191Q8NCU4 936 aa27.08■■□□□ 1.93
CHD9-208ENST00000563410 SEC31BQ9NQW1 1179 aa27.08■■□□□ 1.93
CHD9-208ENST00000563410 PCCAP05165 728 aaPredicted RBP27.07■■□□□ 1.92
CHD9-208ENST00000563410 CCDC30Q5VVM6 783 aa27.07■■□□□ 1.92
CHD9-208ENST00000563410 TRPM4Q8TD43 1214 aa27.07■■□□□ 1.92
CHD9-208ENST00000563410 DBNDD1Q9H9R9 158 aa27.07■■□□□ 1.92
CHD9-208ENST00000563410 CNOT7Q9UIV1 285 aaKnown RBP27.07■■□□□ 1.92
CHD9-208ENST00000563410 C6orf229H3BNL8 230 aa27.06■■□□□ 1.92
CHD9-208ENST00000563410 RIMBP2O15034 1052 aa27.06■■□□□ 1.92
CHD9-208ENST00000563410 AIDAQ96BJ3 306 aa27.06■■□□□ 1.92
CHD9-208ENST00000563410 METTL22Q9BUU2 404 aaPredicted RBP27.06■■□□□ 1.92
CHD9-208ENST00000563410 PRDM10Q9NQV6 1147 aa27.06■■□□□ 1.92
CHD9-208ENST00000563410 MYH3P11055 1940 aa27.06■■□□□ 1.92
CHD9-208ENST00000563410 PSMD14O00487 310 aa27.05■■□□□ 1.92
CHD9-208ENST00000563410 CTCFP49711 727 aaPredicted RBP27.05■■□□□ 1.92
CHD9-208ENST00000563410 TBC1D16Q8TBP0 767 aa27.05■■□□□ 1.92
CHD9-208ENST00000563410 JARID2Q92833 1246 aaPredicted RBP27.05■■□□□ 1.92
CHD9-208ENST00000563410 GPR101Q96P66 508 aaPredicted RBP27.05■■□□□ 1.92
CHD9-208ENST00000563410 GLIS2Q9BZE0 524 aaPredicted RBP27.05■■□□□ 1.92
CHD9-208ENST00000563410 ZBTB12Q9Y330 459 aaPredicted RBP27.05■■□□□ 1.92
CHD9-208ENST00000563410 TLL2Q9Y6L7 1015 aa27.05■■□□□ 1.92
CHD9-208ENST00000563410 ZC3H15Q8WU90 426 aaKnown RBP27.04■■□□□ 1.92
CHD9-208ENST00000563410 TSR2Q969E8 191 aaKnown RBP27.04■■□□□ 1.92
CHD9-208ENST00000563410 CWC25Q9NXE8 425 aaPredicted RBP27.04■■□□□ 1.92
CHD9-208ENST00000563410 PDE8AO60658 829 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 DDX58O95786 925 aaKnown RBP27.03■■□□□ 1.92
CHD9-208ENST00000563410 HSP90B1P14625 803 aaKnown RBP27.03■■□□□ 1.92
CHD9-208ENST00000563410 MICALL2Q8IY33 904 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 DPF2Q92785 391 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 CAPNS2Q96L46 248 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 EYA3Q99504 573 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 CHMP4AQ9BY43 222 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 KCNQ5Q9NR82 932 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 PODXL2Q9NZ53 605 aa27.03■■□□□ 1.92
CHD9-208ENST00000563410 RTL9Q8NET4 1388 aa27.02■■□□□ 1.92
CHD9-208ENST00000563410 H7C1D1 291 aa27.02■■□□□ 1.92
CHD9-208ENST00000563410 ECE2O60344 883 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms