RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 ZC3H4Q9UPT8 1303 aaKnown RBP23.81■■□□□ 1.4
CDH11-206ENST00000562998 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
CDH11-206ENST00000562998 FKBP4Q02790 459 aaKnown RBP eCLIP23.8■■□□□ 1.4
CDH11-206ENST00000562998 GRAPQ13588 217 aa23.8■■□□□ 1.4
CDH11-206ENST00000562998 DDX46Q7L014 1031 aaKnown RBP23.8■■□□□ 1.4
CDH11-206ENST00000562998 GRAPLQ8TC17 118 aaPredicted RBP23.8■■□□□ 1.4
CDH11-206ENST00000562998 ATP6V0A2Q9Y487 856 aa23.8■■□□□ 1.4
CDH11-206ENST00000562998 GRIPAP1Q4V328 841 aa23.79■■□□□ 1.4
CDH11-206ENST00000562998 PSMD1Q99460 953 aa23.79■■□□□ 1.4
CDH11-206ENST00000562998 PTPRCP08575 1304 aa23.79■■□□□ 1.4
CDH11-206ENST00000562998 ZBED9Q6R2W3 1325 aa23.79■■□□□ 1.4
CDH11-206ENST00000562998 LRRC37AA6NMS7 1700 aa23.78■■□□□ 1.4
CDH11-206ENST00000562998 TIAM2Q8IVF5 1701 aa23.78■■□□□ 1.4
CDH11-206ENST00000562998 SP8Q8IXZ3 490 aa23.77■■□□□ 1.4
CDH11-206ENST00000562998 PLA2G12BQ9BX93 195 aa23.77■■□□□ 1.4
CDH11-206ENST00000562998 MYH3P11055 1940 aa23.76■■□□□ 1.39
CDH11-206ENST00000562998 UBE3BQ7Z3V4 1068 aa23.76■■□□□ 1.39
CDH11-206ENST00000562998 CELF1Q92879 486 aaKnown RBP23.76■■□□□ 1.39
CDH11-206ENST00000562998 BCL2L13Q9BXK5 485 aa23.76■■□□□ 1.39
CDH11-206ENST00000562998 ALDH1L1O75891 902 aa23.75■■□□□ 1.39
CDH11-206ENST00000562998 RARSP54136 660 aaKnown RBP23.75■■□□□ 1.39
CDH11-206ENST00000562998 CTSWP56202 376 aa23.75■■□□□ 1.39
CDH11-206ENST00000562998 TMC4Q7Z404 712 aa23.75■■□□□ 1.39
CDH11-206ENST00000562998 TTLL11Q8NHH1 800 aa23.75■■□□□ 1.39
CDH11-206ENST00000562998 CCDC152Q4G0S7 254 aa23.74■■□□□ 1.39
CDH11-206ENST00000562998 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
CDH11-206ENST00000562998 RTL9Q8NET4 1388 aa23.74■■□□□ 1.39
CDH11-206ENST00000562998 RTFDC1Q9BY42 306 aaPredicted RBP23.73■■□□□ 1.39
CDH11-206ENST00000562998 SEC31BQ9NQW1 1179 aa23.73■■□□□ 1.39
CDH11-206ENST00000562998 ZNF277Q9NRM2 450 aaPredicted RBP23.73■■□□□ 1.39
CDH11-206ENST00000562998 RPS8P62241 208 aaKnown RBP23.72■■□□□ 1.39
CDH11-206ENST00000562998 GPBP1L1Q9HC44 474 aaPredicted RBP23.72■■□□□ 1.39
CDH11-206ENST00000562998 LTBP1Q14766 1721 aa23.71■■□□□ 1.39
CDH11-206ENST00000562998 CSF1RP07333 972 aa23.71■■□□□ 1.39
CDH11-206ENST00000562998 SRCIN1Q9C0H9 1055 aa23.71■■□□□ 1.39
CDH11-206ENST00000562998 COL4A5P29400 1685 aa23.7■■□□□ 1.39
CDH11-206ENST00000562998 DUOX1Q9NRD9 1551 aa23.7■■□□□ 1.38
CDH11-206ENST00000562998 UTYO14607 1347 aa23.7■■□□□ 1.38
CDH11-206ENST00000562998 GRM8O00222 908 aa23.7■■□□□ 1.38
CDH11-206ENST00000562998 IARSP41252 1262 aaKnown RBP23.7■■□□□ 1.38
CDH11-206ENST00000562998 SLC4A10Q6U841 1118 aa23.7■■□□□ 1.38
CDH11-206ENST00000562998 ZNF526Q8TF50 670 aaPredicted RBP23.7■■□□□ 1.38
CDH11-206ENST00000562998 GLTPD2A6NH11 291 aa23.69■■□□□ 1.38
CDH11-206ENST00000562998 KIF3CO14782 793 aa23.68■■□□□ 1.38
CDH11-206ENST00000562998 FOXO4P98177 505 aa23.68■■□□□ 1.38
CDH11-206ENST00000562998 VPS33BQ9H267 617 aa23.68■■□□□ 1.38
CDH11-206ENST00000562998 GREM2Q9H772 168 aa23.68■■□□□ 1.38
CDH11-206ENST00000562998 NOB1Q9ULX3 412 aaKnown RBP23.68■■□□□ 1.38
CDH11-206ENST00000562998 MPNDQ8N594 471 aa23.67■■□□□ 1.38
CDH11-206ENST00000562998 CCDC85AQ96PX6 553 aaPredicted RBP23.67■■□□□ 1.38
CDH11-206ENST00000562998 TMX4Q9H1E5 349 aaPredicted RBP23.67■■□□□ 1.38
CDH11-206ENST00000562998 KDM2BQ8NHM5 1336 aa23.66■■□□□ 1.38
CDH11-206ENST00000562998 FZD9O00144 591 aa23.66■■□□□ 1.38
CDH11-206ENST00000562998 ARHGAP45Q92619 1136 aa23.66■■□□□ 1.38
CDH11-206ENST00000562998 NMRK2Q9NPI5 230 aa23.66■■□□□ 1.38
CDH11-206ENST00000562998 EPHA10Q5JZY3 1008 aa23.65■■□□□ 1.38
CDH11-206ENST00000562998 DPP8Q6V1X1 898 aaPredicted RBP23.65■■□□□ 1.38
CDH11-206ENST00000562998 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
CDH11-206ENST00000562998 PODXL2Q9NZ53 605 aa23.65■■□□□ 1.38
CDH11-206ENST00000562998 WDR90Q96KV7 1748 aa23.64■■□□□ 1.38
CDH11-206ENST00000562998 NBPF7P0C2Y1 421 aaPredicted RBP23.64■■□□□ 1.37
CDH11-206ENST00000562998 ANKRD18AQ8IVF6 992 aa23.64■■□□□ 1.37
CDH11-206ENST00000562998 SUPT20HQ8NEM7 779 aa23.64■■□□□ 1.37
CDH11-206ENST00000562998 CDC5LQ99459 802 aaKnown RBP23.64■■□□□ 1.37
CDH11-206ENST00000562998 C9orf78Q9NZ63 289 aaPredicted RBP23.64■■□□□ 1.37
CDH11-206ENST00000562998 KIF16BQ96L93 1317 aa23.63■■□□□ 1.37
CDH11-206ENST00000562998 GPSM2P81274 684 aa23.63■■□□□ 1.37
CDH11-206ENST00000562998 USP44Q9H0E7 712 aa23.63■■□□□ 1.37
CDH11-206ENST00000562998 BSDC1Q9NW68 430 aaPredicted RBP23.63■■□□□ 1.37
CDH11-206ENST00000562998 POTECB2RU33 542 aa23.62■■□□□ 1.37
CDH11-206ENST00000562998 ITGA6P23229 1130 aa23.62■■□□□ 1.37
CDH11-206ENST00000562998 KIAA2012Q0VF49 1180 aa23.62■■□□□ 1.37
CDH11-206ENST00000562998 FAM161AQ3B820 660 aa23.62■■□□□ 1.37
CDH11-206ENST00000562998 DPY19L2Q6NUT2 758 aa23.62■■□□□ 1.37
CDH11-206ENST00000562998 API5Q9BZZ5 524 aaKnown RBP23.62■■□□□ 1.37
CDH11-206ENST00000562998 BCAR3O75815 825 aa23.61■■□□□ 1.37
CDH11-206ENST00000562998 AOC3Q16853 763 aa23.61■■□□□ 1.37
CDH11-206ENST00000562998 LARGE2Q8N3Y3 721 aa23.61■■□□□ 1.37
CDH11-206ENST00000562998 SUCLG2Q96I99 432 aa23.61■■□□□ 1.37
CDH11-206ENST00000562998 POLLQ9UGP5 575 aa23.61■■□□□ 1.37
CDH11-206ENST00000562998 NSFL1CQ9UNZ2 370 aaKnown RBP23.61■■□□□ 1.37
CDH11-206ENST00000562998 ZNF541Q9H0D2 1346 aa23.6■■□□□ 1.37
CDH11-206ENST00000562998 PPIP5K2O43314 1243 aa23.6■■□□□ 1.37
CDH11-206ENST00000562998 JDP2Q8WYK2 163 aa23.6■■□□□ 1.37
CDH11-206ENST00000562998 SPEF2Q9C093 1822 aa23.59■■□□□ 1.37
CDH11-206ENST00000562998 DDNO94850 711 aaPredicted RBP23.59■■□□□ 1.37
CDH11-206ENST00000562998 CCT4P50991 539 aaKnown RBP23.59■■□□□ 1.37
CDH11-206ENST00000562998 RABL6Q3YEC7 729 aaPredicted RBP23.59■■□□□ 1.37
CDH11-206ENST00000562998 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
CDH11-206ENST00000562998 TBC1D16Q8TBP0 767 aa23.59■■□□□ 1.37
CDH11-206ENST00000562998 L3MBTL3Q96JM7 780 aaPredicted RBP23.59■■□□□ 1.37
CDH11-206ENST00000562998 RRAGCQ9HB90 399 aa23.59■■□□□ 1.37
CDH11-206ENST00000562998 MINPP1Q9UNW1 487 aa23.59■■□□□ 1.37
CDH11-206ENST00000562998 C1QTNF8P60827 252 aa23.57■■□□□ 1.36
CDH11-206ENST00000562998 INTS3Q68E01 1043 aaKnown RBP23.57■■□□□ 1.36
CDH11-206ENST00000562998 ANKRD18BA2A2Z9 1011 aa23.56■■□□□ 1.36
CDH11-206ENST00000562998 TRIM27P14373 513 aa23.56■■□□□ 1.36
CDH11-206ENST00000562998 VEGFAP15692 232 aaPredicted RBP23.56■■□□□ 1.36
CDH11-206ENST00000562998 NIM1KQ8IY84 436 aa23.56■■□□□ 1.36
CDH11-206ENST00000562998 ANKRD44Q8N8A2 993 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms