RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 EXOC6BQ9Y2D4 811 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 LRRFIP2Q9Y608 721 aaKnown RBP9.04□□□□□ -0.96
CFDP1-202ENST00000562602 CEP170BQ9Y4F5 1589 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-202ENST00000562602 SURF6O75683 361 aaKnown RBP9.03□□□□□ -0.96
CFDP1-202ENST00000562602 DDX58O95786 925 aaKnown RBP9.03□□□□□ -0.96
CFDP1-202ENST00000562602 HSPA4P34932 840 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 TERF1P54274 439 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 EIF4A1P60842 406 aaKnown RBP9.03□□□□□ -0.96
CFDP1-202ENST00000562602 TEFQ10587 303 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 ZSCAN23Q3MJ62 389 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 ZSCAN30Q86W11 494 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 ANKLE2Q86XL3 938 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 FAM184AQ8NB25 1140 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 DNAAF4Q8WXU2 420 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 ZSCAN31Q96LW9 406 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-202ENST00000562602 PANK2Q9BZ23 570 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-202ENST00000562602 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-202ENST00000562602 PIK3C2AO00443 1686 aa9.03□□□□□ -0.96
CFDP1-202ENST00000562602 N4BP2Q86UW6 1770 aaPredicted RBP9.02□□□□□ -0.97
CFDP1-202ENST00000562602 PNMA6EA0A0J9YXQ4 647 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 PRPF40AO75400 957 aaKnown RBP9.02□□□□□ -0.97
CFDP1-202ENST00000562602 MSNP26038 577 aaKnown RBP9.02□□□□□ -0.97
CFDP1-202ENST00000562602 LRSAM1Q6UWE0 723 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 GAS2L3Q86XJ1 694 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 TICAM2Q86XR7 235 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 CLASRPQ8N2M8 674 aaKnown RBP9.02□□□□□ -0.97
CFDP1-202ENST00000562602 ARXQ96QS3 562 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 IL21Q9HBE4 155 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 HYPKQ9NX55 129 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 NWD1Q149M9 1564 aa9.02□□□□□ -0.97
CFDP1-202ENST00000562602 SGSM2O43147 1006 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 SRGAP3O43295 1099 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 TPM2P07951 284 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 KCNA6P17658 529 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 PSME1Q06323 249 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 C1orf141Q5JVX7 400 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 BEND3Q5T5X7 828 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 CAVIN1Q6NZI2 390 aaKnown RBP9.01□□□□□ -0.97
CFDP1-202ENST00000562602 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 TMEM87AQ8NBN3 555 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 TM6SF1Q9BZW5 370 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 SH2B1Q9NRF2 756 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-202ENST00000562602 ADGRG1Q9Y653 693 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 RAD50Q92878 1312 aa9.01□□□□□ -0.97
CFDP1-202ENST00000562602 FAM208AQ9UK61 1670 aaKnown RBP9□□□□□ -0.97
CFDP1-202ENST00000562602 MED1Q15648 1581 aaPredicted RBP9□□□□□ -0.97
CFDP1-202ENST00000562602 BTBD11A6QL63 1104 aa9□□□□□ -0.97
CFDP1-202ENST00000562602 RNF40O75150 1001 aa9□□□□□ -0.97
CFDP1-202ENST00000562602 KSR2Q6VAB6 950 aa9□□□□□ -0.97
CFDP1-202ENST00000562602 PDZRN4Q6ZMN7 1036 aaPredicted RBP9□□□□□ -0.97
CFDP1-202ENST00000562602 NKX2-3Q8TAU0 364 aa9□□□□□ -0.97
CFDP1-202ENST00000562602 CCDC39Q9UFE4 941 aa9□□□□□ -0.97
CFDP1-202ENST00000562602 LIMCH1Q9UPQ0 1083 aa9□□□□□ -0.97
CFDP1-202ENST00000562602 PHRF1Q9P1Y6 1649 aaKnown RBP8.99□□□□□ -0.97
CFDP1-202ENST00000562602 ZKSCAN1P17029 563 aaPredicted RBP8.99□□□□□ -0.97
CFDP1-202ENST00000562602 PSMA5P28066 241 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 OS9Q13438 667 aaPredicted RBP8.99□□□□□ -0.97
CFDP1-202ENST00000562602 PPP1R18Q6NYC8 613 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 ZNF530Q6P9A1 599 aaPredicted RBP8.99□□□□□ -0.97
CFDP1-202ENST00000562602 C14orf37Q86TY3 774 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 ZGPATQ8N5A5 531 aaKnown RBP8.99□□□□□ -0.97
CFDP1-202ENST00000562602 EVI5LQ96CN4 794 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 PDLIM2Q96JY6 352 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 NAP1L5Q96NT1 182 aaPredicted RBP8.99□□□□□ -0.97
CFDP1-202ENST00000562602 DIAPH3Q9NSV4 1193 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 ECHDC1Q9NTX5 307 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 ZDHHC9Q9Y397 364 aa8.99□□□□□ -0.97
CFDP1-202ENST00000562602 PI4KAP2A4QPH2 592 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 RNMTO43148 476 aaKnown RBP8.98□□□□□ -0.97
CFDP1-202ENST00000562602 IFIT2P09913 472 aaKnown RBP8.98□□□□□ -0.97
CFDP1-202ENST00000562602 ANKRD1Q15327 319 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 GLIPR1L2Q4G1C9 344 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 VPS53Q5VIR6 699 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 RNF20Q5VTR2 975 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 PI4KAP1Q8N8J0 262 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 LINS1Q8NG48 757 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 PI4K2BQ8TCG2 481 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 KCNB2Q92953 911 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 LTV1Q96GA3 475 aaPredicted RBP8.98□□□□□ -0.97
CFDP1-202ENST00000562602 TSPY26PQ9H489 355 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 C9orf78Q9NZ63 289 aaPredicted RBP8.98□□□□□ -0.97
CFDP1-202ENST00000562602 NOL7Q9UMY1 257 aaKnown RBP8.98□□□□□ -0.97
CFDP1-202ENST00000562602 STRCQ7RTU9 1775 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 UTYO14607 1347 aa8.98□□□□□ -0.97
CFDP1-202ENST00000562602 NFAT5O94916 1531 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 ZNF500O60304 480 aaPredicted RBP8.97□□□□□ -0.97
CFDP1-202ENST00000562602 EIF2S2P20042 333 aaKnown RBP8.97□□□□□ -0.97
CFDP1-202ENST00000562602 PDCP20941 246 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 G3BP1Q13283 466 aaKnown RBP eCLIP8.97□□□□□ -0.97
CFDP1-202ENST00000562602 NBPF6Q5VWK0 638 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 GPT2Q8TD30 523 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 CHMP4CQ96CF2 233 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 NBPF4Q96M43 638 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 LSG1Q9H089 658 aaKnown RBP8.97□□□□□ -0.97
CFDP1-202ENST00000562602 ALDH8A1Q9H2A2 487 aaPredicted RBP8.97□□□□□ -0.97
CFDP1-202ENST00000562602 PHAXQ9H814 394 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms