RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ANKRD13DQ6ZTN6 518 aa21.75■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 MPNDQ8N594 471 aa21.75■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 ISCA1Q9BUE6 129 aa21.75■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 MBIPQ9NS73 344 aa21.75■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 ZNRF3Q9ULT6 936 aa21.75■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 COL4A1P02462 1669 aa21.75■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 RASSF10A6NK89 507 aa21.74■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 FOXN1O15353 648 aa21.74■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 FMR1Q06787 632 aaKnown RBP eCLIP21.74■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 DUSP27Q5VZP5 1158 aa21.74■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 USP50Q70EL3 339 aaPredicted RBP21.74■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 GPRC5DQ9NZD1 345 aa21.74■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 ATP5J2-PTCD1G3V325 749 aa21.73■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 CAPN15O75808 1086 aa21.73■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 ZNF853P0CG23 659 aa21.73■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 KIAA2012Q0VF49 1180 aa21.73■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 FAM89AQ96GI7 184 aa21.73■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 DEFB115Q30KQ5 88 aa21.71■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 ADARB2Q9NS39 739 aaKnown RBP21.71■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 HYPKQ9NX55 129 aa21.71■■□□□ 1.07
VPS9D1-AS1-201ENST00000562298 APAF1O14727 1248 aa21.7■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 GMPSP49915 693 aaPredicted RBP21.7■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 ABT1Q9ULW3 272 aaKnown RBP21.7■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 YDJCA8MPS7 323 aa21.69■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 TRAF5O00463 557 aa21.69■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 RAD17O75943 681 aa21.69■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 SF3B3Q15393 1217 aaKnown RBP21.69■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 TMC4Q7Z404 712 aa21.69■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 CELF1Q92879 486 aaKnown RBP21.69■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 TRPM7Q96QT4 1865 aa21.69■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 CST9Q5W186 159 aa21.68■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 CIAPIN1Q6FI81 312 aa21.68■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 IFT57Q9NWB7 429 aa21.68■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 WBP1LQ9NX94 342 aa21.68■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 WDR33Q9C0J8 1336 aaKnown RBP21.68■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 THSD7BQ9C0I4 1608 aa21.68■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 CDHR2Q9BYE9 1310 aa21.67■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 TRIM28Q13263 835 aaKnown RBP21.67■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 PHAXQ9H814 394 aaKnown RBP21.67■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 AIDAQ96BJ3 306 aa21.66■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 IRS4O14654 1257 aaPredicted RBP21.65■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 GNAI1P63096 354 aa21.65■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 TNIP1Q15025 636 aa21.65■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 RIC3Q7Z5B4 369 aa21.65■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 PRDM10Q9NQV6 1147 aa21.65■■□□□ 1.06
VPS9D1-AS1-201ENST00000562298 SHTN1A0MZ66 631 aa21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CTCFP49711 727 aaPredicted RBP21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 HIRAP54198 1017 aaPredicted RBP21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 GOLGA2Q08379 1002 aa21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 C8orf58Q8NAV2 365 aa21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 POLLQ9UGP5 575 aa21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 PGAP2Q9UHJ9 254 aa21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 GPSM2P81274 684 aa21.63■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 WASHC4Q2M389 1173 aa21.63■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 TRPM4Q8TD43 1214 aa21.63■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CYP4F22Q6NT55 531 aa21.62■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 ZBTB38Q8NAP3 1195 aaPredicted RBP21.62■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CAPNS2Q96L46 248 aa21.62■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 GLIS2Q9BZE0 524 aaPredicted RBP21.62■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 DBNDD1Q9H9R9 158 aa21.62■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 TLL2Q9Y6L7 1015 aa21.62■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 LBX1P52954 281 aa21.61■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 MYD88Q99836 296 aa21.61■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CNOT7Q9UIV1 285 aaKnown RBP21.61■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 ZBTB12Q9Y330 459 aaPredicted RBP21.61■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 C6orf229H3BNL8 230 aa21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 PSMD14O00487 310 aa21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 RIMBP2O15034 1052 aa21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 HSPA8P11142 646 aaKnown RBP21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 RPS8P62241 208 aaKnown RBP21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 MAP2K1Q02750 393 aaPredicted RBP21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 PAXIP1Q6ZW49 1069 aaPredicted RBP21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 MICALL2Q8IY33 904 aa21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 ZC3H15Q8WU90 426 aaKnown RBP21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 GPR101Q96P66 508 aaPredicted RBP21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 SEC31BQ9NQW1 1179 aa21.6■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CELF2O95319 508 aaKnown RBP21.59■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 TBC1D16Q8TBP0 767 aa21.59■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 ECE1P42892 770 aa21.58■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 GRM1Q13255 1194 aa21.58■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 SAPCD2Q86UD0 394 aa21.58■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 TSPYL6Q8N831 410 aa21.58■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 CCDC191Q8NCU4 936 aa21.58■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 KCNQ5Q9NR82 932 aa21.58■■□□□ 1.05
VPS9D1-AS1-201ENST00000562298 RTL9Q8NET4 1388 aa21.58■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 H7C1D1 291 aa21.57■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 ECE2O60344 883 aa21.57■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 PCCAP05165 728 aaPredicted RBP21.57■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 DOK7Q18PE1 504 aa21.57■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 DPF2Q92785 391 aa21.57■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 JARID2Q92833 1246 aaPredicted RBP21.57■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 METTL22Q9BUU2 404 aaPredicted RBP21.57■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 EGFRP00533 1210 aa21.56■■□□□ 1.04
VPS9D1-AS1-201ENST00000562298 CCDC30Q5VVM6 783 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms