RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CHMP4AQ9BY43 222 aa22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 TMX4Q9H1E5 349 aaPredicted RBP22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 SCN9AQ15858 1988 aa22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 IRS4O14654 1257 aaPredicted RBP22.13■■□□□ 1.13
CDC42BPB-208ENST00000561271 MAP3K2Q9Y2U5 619 aa22.13■■□□□ 1.13
CDC42BPB-208ENST00000561271 A0A1B0GUL6 1792 aa22.12■■□□□ 1.13
CDC42BPB-208ENST00000561271 IQCA1LA6NCM1 817 aa22.12■■□□□ 1.13
CDC42BPB-208ENST00000561271 PPIP5K2O43314 1243 aa22.12■■□□□ 1.13
CDC42BPB-208ENST00000561271 BBOX1O75936 387 aa22.12■■□□□ 1.13
CDC42BPB-208ENST00000561271 AOC3Q16853 763 aa22.12■■□□□ 1.13
CDC42BPB-208ENST00000561271 SP8Q8IXZ3 490 aa22.12■■□□□ 1.13
CDC42BPB-208ENST00000561271 METTL22Q9BUU2 404 aaPredicted RBP22.12■■□□□ 1.13
CDC42BPB-208ENST00000561271 SF3B3Q15393 1217 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-208ENST00000561271 G2E3Q7L622 706 aa22.11■■□□□ 1.13
CDC42BPB-208ENST00000561271 WDR63Q8IWG1 891 aa22.11■■□□□ 1.13
CDC42BPB-208ENST00000561271 ZBTB38Q8NAP3 1195 aaPredicted RBP22.11■■□□□ 1.13
CDC42BPB-208ENST00000561271 CELF1Q92879 486 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-208ENST00000561271 CWC25Q9NXE8 425 aaPredicted RBP22.11■■□□□ 1.13
CDC42BPB-208ENST00000561271 PI4KAP2A4QPH2 592 aa22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 EIF6P56537 245 aaKnown RBP22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 DPP8Q6V1X1 898 aaPredicted RBP22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 NIM1KQ8IY84 436 aa22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 GPC2Q8N158 579 aa22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 PI4KAP1Q8N8J0 262 aa22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 CCDC191Q8NCU4 936 aa22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 JARID2Q92833 1246 aaPredicted RBP22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 TAF1DQ9H5J8 278 aaPredicted RBP22.1■■□□□ 1.13
CDC42BPB-208ENST00000561271 KSR2Q6VAB6 950 aa22.09■■□□□ 1.13
CDC42BPB-208ENST00000561271 MPNDQ8N594 471 aa22.09■■□□□ 1.13
CDC42BPB-208ENST00000561271 RTFDC1Q9BY42 306 aaPredicted RBP22.09■■□□□ 1.13
CDC42BPB-208ENST00000561271 SPINK5Q9NQ38 1064 aaPredicted RBP22.09■■□□□ 1.13
CDC42BPB-208ENST00000561271 HACL1Q9UJ83 578 aa22.09■■□□□ 1.13
CDC42BPB-208ENST00000561271 GJA3Q9Y6H8 435 aa22.09■■□□□ 1.13
CDC42BPB-208ENST00000561271 PCCAP05165 728 aaPredicted RBP22.08■■□□□ 1.13
CDC42BPB-208ENST00000561271 EXOSC9Q06265 439 aaKnown RBP22.08■■□□□ 1.13
CDC42BPB-208ENST00000561271 CHADLQ6NUI6 762 aa22.08■■□□□ 1.13
CDC42BPB-208ENST00000561271 SUPT20HQ8NEM7 779 aa22.08■■□□□ 1.13
CDC42BPB-208ENST00000561271 POLR2AP24928 1970 aaKnown RBP22.08■■□□□ 1.12
CDC42BPB-208ENST00000561271 SLC4A2P04920 1241 aa22.07■■□□□ 1.12
CDC42BPB-208ENST00000561271 IGKV5-2P06315 115 aa22.07■■□□□ 1.12
CDC42BPB-208ENST00000561271 EAPPQ56P03 285 aaPredicted RBP22.07■■□□□ 1.12
CDC42BPB-208ENST00000561271 TMC4Q7Z404 712 aa22.07■■□□□ 1.12
CDC42BPB-208ENST00000561271 DNAJC5GQ8N7S2 189 aa22.07■■□□□ 1.12
CDC42BPB-208ENST00000561271 EPHX2P34913 555 aa22.06■■□□□ 1.12
CDC42BPB-208ENST00000561271 CWF19L2Q2TBE0 894 aaKnown RBP22.06■■□□□ 1.12
CDC42BPB-208ENST00000561271 FLIIQ13045 1269 aa22.05■■□□□ 1.12
CDC42BPB-208ENST00000561271 LDHDQ86WU2 507 aa22.05■■□□□ 1.12
CDC42BPB-208ENST00000561271 CCDC85AQ96PX6 553 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-208ENST00000561271 SEC31BQ9NQW1 1179 aa22.05■■□□□ 1.12
CDC42BPB-208ENST00000561271 ZNF646O15015 1829 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-208ENST00000561271 CDHR2Q9BYE9 1310 aa22.05■■□□□ 1.12
CDC42BPB-208ENST00000561271 VAMP4O75379 141 aa22.04■■□□□ 1.12
CDC42BPB-208ENST00000561271 KIAA2012Q0VF49 1180 aa22.04■■□□□ 1.12
CDC42BPB-208ENST00000561271 NEXNQ0ZGT2 675 aa22.04■■□□□ 1.12
CDC42BPB-208ENST00000561271 PDE8AO60658 829 aa22.03■■□□□ 1.12
CDC42BPB-208ENST00000561271 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
CDC42BPB-208ENST00000561271 SCNN1DP51172 638 aa22.03■■□□□ 1.12
CDC42BPB-208ENST00000561271 FKBP5Q13451 457 aaPredicted RBP22.03■■□□□ 1.12
CDC42BPB-208ENST00000561271 VPS33BQ9H267 617 aa22.03■■□□□ 1.12
CDC42BPB-208ENST00000561271 NEURL1BA8MQ27 555 aa22.02■■□□□ 1.12
CDC42BPB-208ENST00000561271 GPSM2P81274 684 aa22.02■■□□□ 1.12
CDC42BPB-208ENST00000561271 CCDC152Q4G0S7 254 aa22.02■■□□□ 1.12
CDC42BPB-208ENST00000561271 KLRG1Q96E93 195 aa22.02■■□□□ 1.12
CDC42BPB-208ENST00000561271 MYH16Q9H6N6 1097 aa22.02■■□□□ 1.12
CDC42BPB-208ENST00000561271 ZNRF3Q9ULT6 936 aa22.02■■□□□ 1.12
CDC42BPB-208ENST00000561271 NSFL1CQ9UNZ2 370 aaKnown RBP22.02■■□□□ 1.12
CDC42BPB-208ENST00000561271 LMOD1P29536 600 aaPredicted RBP22.01■■□□□ 1.11
CDC42BPB-208ENST00000561271 RPS8P62241 208 aaKnown RBP22.01■■□□□ 1.11
CDC42BPB-208ENST00000561271 CLEC11AQ9Y240 323 aa22.01■■□□□ 1.11
CDC42BPB-208ENST00000561271 ZNF521Q96K83 1311 aa22.01■■□□□ 1.11
CDC42BPB-208ENST00000561271 PCNTO95613 3336 aa22■■□□□ 1.11
CDC42BPB-208ENST00000561271 CTSWP56202 376 aa22■■□□□ 1.11
CDC42BPB-208ENST00000561271 CXCL9Q07325 125 aa22■■□□□ 1.11
CDC42BPB-208ENST00000561271 UBE3BQ7Z3V4 1068 aa22■■□□□ 1.11
CDC42BPB-208ENST00000561271 EPS15P42566 896 aa21.99■■□□□ 1.11
CDC42BPB-208ENST00000561271 PNMA8AQ86V59 439 aaPredicted RBP21.99■■□□□ 1.11
CDC42BPB-208ENST00000561271 DNAAF4Q8WXU2 420 aa21.99■■□□□ 1.11
CDC42BPB-208ENST00000561271 GPR101Q96P66 508 aaPredicted RBP21.99■■□□□ 1.11
CDC42BPB-208ENST00000561271 POLLQ9UGP5 575 aa21.99■■□□□ 1.11
CDC42BPB-208ENST00000561271 YDJCA8MPS7 323 aa21.98■■□□□ 1.11
CDC42BPB-208ENST00000561271 C6orf229H3BNL8 230 aa21.98■■□□□ 1.11
CDC42BPB-208ENST00000561271 RAD17O75943 681 aa21.98■■□□□ 1.11
CDC42BPB-208ENST00000561271 PASKQ96RG2 1323 aa21.98■■□□□ 1.11
CDC42BPB-208ENST00000561271 RIMBP2O15034 1052 aa21.97■■□□□ 1.11
CDC42BPB-208ENST00000561271 WASHC4Q2M389 1173 aa21.97■■□□□ 1.11
CDC42BPB-208ENST00000561271 MAP1SQ66K74 1059 aaPredicted RBP21.97■■□□□ 1.11
CDC42BPB-208ENST00000561271 CIAPIN1Q6FI81 312 aa21.97■■□□□ 1.11
CDC42BPB-208ENST00000561271 DBNDD1Q9H9R9 158 aa21.97■■□□□ 1.11
CDC42BPB-208ENST00000561271 GMPSP49915 693 aaPredicted RBP21.96■■□□□ 1.11
CDC42BPB-208ENST00000561271 GCKRQ14397 625 aa21.96■■□□□ 1.11
CDC42BPB-208ENST00000561271 TBC1D16Q8TBP0 767 aa21.96■■□□□ 1.11
CDC42BPB-208ENST00000561271 GPRC5DQ9NZD1 345 aa21.96■■□□□ 1.11
CDC42BPB-208ENST00000561271 F6X3S4 739 aa21.95■■□□□ 1.1
CDC42BPB-208ENST00000561271 UFL1O94874 794 aa21.95■■□□□ 1.1
CDC42BPB-208ENST00000561271 ITGBL1O95965 494 aaPredicted RBP21.95■■□□□ 1.1
CDC42BPB-208ENST00000561271 ANKRD18AQ8IVF6 992 aa21.95■■□□□ 1.1
CDC42BPB-208ENST00000561271 TTLL11Q8NHH1 800 aa21.95■■□□□ 1.1
CDC42BPB-208ENST00000561271 GREM2Q9H772 168 aa21.95■■□□□ 1.1
CDC42BPB-208ENST00000561271 RTL9Q8NET4 1388 aa21.95■■□□□ 1.1
CDC42BPB-208ENST00000561271 H7C1W4 665 aa21.94■■□□□ 1.1
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