RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 GRIPAP1Q4V328 841 aa17.33■□□□□ 0.37
CHRNB4-204ENST00000559849 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.37
CHRNB4-204ENST00000559849 TAOK3Q9H2K8 898 aa17.33■□□□□ 0.37
CHRNB4-204ENST00000559849 RNF181Q9P0P0 153 aa17.33■□□□□ 0.37
CHRNB4-204ENST00000559849 ALDH1L1O75891 902 aa17.33■□□□□ 0.36
CHRNB4-204ENST00000559849 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
CHRNB4-204ENST00000559849 OLFM4Q6UX06 510 aa17.33■□□□□ 0.36
CHRNB4-204ENST00000559849 CCDC88AQ3V6T2 1871 aa17.32■□□□□ 0.36
CHRNB4-204ENST00000559849 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
CHRNB4-204ENST00000559849 ZNF784Q8NCA9 323 aaPredicted RBP17.32■□□□□ 0.36
CHRNB4-204ENST00000559849 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
CHRNB4-204ENST00000559849 ATP6V0A2Q9Y487 856 aa17.32■□□□□ 0.36
CHRNB4-204ENST00000559849 TAF1P21675 1872 aa17.31■□□□□ 0.36
CHRNB4-204ENST00000559849 PRELPP51888 382 aa17.31■□□□□ 0.36
CHRNB4-204ENST00000559849 SP8Q8IXZ3 490 aa17.31■□□□□ 0.36
CHRNB4-204ENST00000559849 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
CHRNB4-204ENST00000559849 GRM8O00222 908 aa17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 CASP7P55210 303 aa17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 CTSWP56202 376 aa17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 PLA2G12BQ9BX93 195 aa17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 MYH3P11055 1940 aa17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 TTLL11Q8NHH1 800 aa17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 PSMD1Q99460 953 aa17.3■□□□□ 0.36
CHRNB4-204ENST00000559849 KIF16BQ96L93 1317 aa17.29■□□□□ 0.36
CHRNB4-204ENST00000559849 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
CHRNB4-204ENST00000559849 API5Q9BZZ5 524 aaKnown RBP17.29■□□□□ 0.36
CHRNB4-204ENST00000559849 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
CHRNB4-204ENST00000559849 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
CHRNB4-204ENST00000559849 ZC3H4Q9UPT8 1303 aaKnown RBP17.28■□□□□ 0.36
CHRNB4-204ENST00000559849 SNED1Q8TER0 1413 aa17.27■□□□□ 0.36
CHRNB4-204ENST00000559849 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
CHRNB4-204ENST00000559849 BCAR3O75815 825 aa17.27■□□□□ 0.36
CHRNB4-204ENST00000559849 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.35
CHRNB4-204ENST00000559849 CSF1RP07333 972 aa17.27■□□□□ 0.35
CHRNB4-204ENST00000559849 ZNF277Q9NRM2 450 aaPredicted RBP17.27■□□□□ 0.35
CHRNB4-204ENST00000559849 MPNDQ8N594 471 aa17.26■□□□□ 0.35
CHRNB4-204ENST00000559849 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
CHRNB4-204ENST00000559849 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 GREM2Q9H772 168 aa17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 RTL9Q8NET4 1388 aa17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 DPP8Q6V1X1 898 aaPredicted RBP17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 ANKRD18AQ8IVF6 992 aa17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 GPBP1L1Q9HC44 474 aaPredicted RBP17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 UTYO14607 1347 aa17.25■□□□□ 0.35
CHRNB4-204ENST00000559849 NBPF7P0C2Y1 421 aaPredicted RBP17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 IARSP41252 1262 aaKnown RBP17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 FOXO4P98177 505 aa17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 SUPT20HQ8NEM7 779 aa17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 USP44Q9H0E7 712 aa17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 VPS33BQ9H267 617 aa17.24■□□□□ 0.35
CHRNB4-204ENST00000559849 ITGA6P23229 1130 aa17.23■□□□□ 0.35
CHRNB4-204ENST00000559849 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
CHRNB4-204ENST00000559849 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
CHRNB4-204ENST00000559849 LMBR1LQ6UX01 489 aa17.22■□□□□ 0.35
CHRNB4-204ENST00000559849 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
CHRNB4-204ENST00000559849 JDP2Q8WYK2 163 aa17.22■□□□□ 0.35
CHRNB4-204ENST00000559849 KDM2BQ8NHM5 1336 aa17.22■□□□□ 0.35
CHRNB4-204ENST00000559849 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
CHRNB4-204ENST00000559849 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
CHRNB4-204ENST00000559849 COL4A1P02462 1669 aa17.22■□□□□ 0.35
CHRNB4-204ENST00000559849 ANKRD18BA2A2Z9 1011 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 TRIM27P14373 513 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 IFIT5Q13325 482 aaKnown RBP17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 LARGE2Q8N3Y3 721 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 CHMP3Q9Y3E7 222 aa17.21■□□□□ 0.35
CHRNB4-204ENST00000559849 ZKSCAN2Q63HK3 967 aa17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 GPSM2P81274 684 aa17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 INTS3Q68E01 1043 aaKnown RBP17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 KAZALD1Q96I82 304 aa17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 MPHOSPH8Q99549 860 aa17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
CHRNB4-204ENST00000559849 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
CHRNB4-204ENST00000559849 CCDC57Q2TAC2 916 aa17.19■□□□□ 0.34
CHRNB4-204ENST00000559849 C6orf229H3BNL8 230 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 FZD9O00144 591 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 AOC3Q16853 763 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 POLLQ9UGP5 575 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 XDHP47989 1333 aa17.18■□□□□ 0.34
CHRNB4-204ENST00000559849 RABL6Q3YEC7 729 aaPredicted RBP17.17■□□□□ 0.34
CHRNB4-204ENST00000559849 TBC1D16Q8TBP0 767 aa17.17■□□□□ 0.34
CHRNB4-204ENST00000559849 CLUAP1Q96AJ1 413 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms