RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TMC4Q7Z404 712 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 GPC2Q8N158 579 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 ZBTB38Q8NAP3 1195 aaPredicted RBP21.92■■□□□ 1.1
LRRC28-210ENST00000558879 CCDC191Q8NCU4 936 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 MYD88Q99836 296 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 METTL22Q9BUU2 404 aaPredicted RBP21.92■■□□□ 1.1
LRRC28-210ENST00000558879 VPS33BQ9H267 617 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 TAF1DQ9H5J8 278 aaPredicted RBP21.92■■□□□ 1.1
LRRC28-210ENST00000558879 SCN9AQ15858 1988 aa21.91■■□□□ 1.1
LRRC28-210ENST00000558879 IRS4O14654 1257 aaPredicted RBP21.91■■□□□ 1.1
LRRC28-210ENST00000558879 LARGE2Q8N3Y3 721 aa21.91■■□□□ 1.1
LRRC28-210ENST00000558879 STK31Q9BXU1 1019 aa21.9■■□□□ 1.1
LRRC28-210ENST00000558879 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.09
LRRC28-210ENST00000558879 HTRA3P83110 453 aa21.89■■□□□ 1.09
LRRC28-210ENST00000558879 AOC3Q16853 763 aa21.89■■□□□ 1.09
LRRC28-210ENST00000558879 RTL5Q5HYW3 569 aaPredicted RBP21.89■■□□□ 1.09
LRRC28-210ENST00000558879 SUPT20HQ8NEM7 779 aa21.89■■□□□ 1.09
LRRC28-210ENST00000558879 CELF1Q92879 486 aaKnown RBP21.89■■□□□ 1.09
LRRC28-210ENST00000558879 TMX4Q9H1E5 349 aaPredicted RBP21.89■■□□□ 1.09
LRRC28-210ENST00000558879 MAP3K2Q9Y2U5 619 aa21.89■■□□□ 1.09
LRRC28-210ENST00000558879 ZNF646O15015 1829 aaPredicted RBP21.89■■□□□ 1.09
LRRC28-210ENST00000558879 CDHR2Q9BYE9 1310 aa21.88■■□□□ 1.09
LRRC28-210ENST00000558879 PPIP5K2O43314 1243 aa21.88■■□□□ 1.09
LRRC28-210ENST00000558879 EIF6P56537 245 aaKnown RBP21.88■■□□□ 1.09
LRRC28-210ENST00000558879 CHADLQ6NUI6 762 aa21.88■■□□□ 1.09
LRRC28-210ENST00000558879 DPP8Q6V1X1 898 aaPredicted RBP21.88■■□□□ 1.09
LRRC28-210ENST00000558879 KSR2Q6VAB6 950 aa21.88■■□□□ 1.09
LRRC28-210ENST00000558879 MPNDQ8N594 471 aa21.88■■□□□ 1.09
LRRC28-210ENST00000558879 CWC25Q9NXE8 425 aaPredicted RBP21.88■■□□□ 1.09
LRRC28-210ENST00000558879 HACL1Q9UJ83 578 aa21.88■■□□□ 1.09
LRRC28-210ENST00000558879 PI4KAP2A4QPH2 592 aa21.87■■□□□ 1.09
LRRC28-210ENST00000558879 IGKV5-2P06315 115 aa21.87■■□□□ 1.09
LRRC28-210ENST00000558879 G2E3Q7L622 706 aa21.87■■□□□ 1.09
LRRC28-210ENST00000558879 LDHDQ86WU2 507 aa21.87■■□□□ 1.09
LRRC28-210ENST00000558879 NIM1KQ8IY84 436 aa21.87■■□□□ 1.09
LRRC28-210ENST00000558879 PI4KAP1Q8N8J0 262 aa21.87■■□□□ 1.09
LRRC28-210ENST00000558879 KIAA2012Q0VF49 1180 aa21.86■■□□□ 1.09
LRRC28-210ENST00000558879 FAM9BQ8IZU0 186 aa21.86■■□□□ 1.09
LRRC28-210ENST00000558879 SPINK5Q9NQ38 1064 aaPredicted RBP21.86■■□□□ 1.09
LRRC28-210ENST00000558879 SALL2Q9Y467 1007 aaPredicted RBP21.86■■□□□ 1.09
LRRC28-210ENST00000558879 ZNF521Q96K83 1311 aa21.85■■□□□ 1.09
LRRC28-210ENST00000558879 PDE8AO60658 829 aa21.85■■□□□ 1.09
LRRC28-210ENST00000558879 HSP90B1P14625 803 aaKnown RBP21.85■■□□□ 1.09
LRRC28-210ENST00000558879 EPHX2P34913 555 aa21.85■■□□□ 1.09
LRRC28-210ENST00000558879 SCNN1DP51172 638 aa21.85■■□□□ 1.09
LRRC28-210ENST00000558879 KLRG1Q96E93 195 aa21.85■■□□□ 1.09
LRRC28-210ENST00000558879 PASKQ96RG2 1323 aa21.84■■□□□ 1.09
LRRC28-210ENST00000558879 VAMP4O75379 141 aa21.84■■□□□ 1.09
LRRC28-210ENST00000558879 SLC4A2P04920 1241 aa21.83■■□□□ 1.09
LRRC28-210ENST00000558879 EXOSC9Q06265 439 aaKnown RBP21.83■■□□□ 1.09
LRRC28-210ENST00000558879 FLIIQ13045 1269 aa21.83■■□□□ 1.09
LRRC28-210ENST00000558879 NEURL1BA8MQ27 555 aa21.82■■□□□ 1.08
LRRC28-210ENST00000558879 PNMA8AQ86V59 439 aaPredicted RBP21.82■■□□□ 1.08
LRRC28-210ENST00000558879 ZNRF3Q9ULT6 936 aa21.82■■□□□ 1.08
LRRC28-210ENST00000558879 GJA3Q9Y6H8 435 aa21.82■■□□□ 1.08
LRRC28-210ENST00000558879 NEXNQ0ZGT2 675 aa21.81■■□□□ 1.08
LRRC28-210ENST00000558879 CWF19L2Q2TBE0 894 aaKnown RBP21.81■■□□□ 1.08
LRRC28-210ENST00000558879 CCDC152Q4G0S7 254 aa21.81■■□□□ 1.08
LRRC28-210ENST00000558879 JMYQ8N9B5 988 aa21.81■■□□□ 1.08
LRRC28-210ENST00000558879 SEC31BQ9NQW1 1179 aa21.81■■□□□ 1.08
LRRC28-210ENST00000558879 RTL9Q8NET4 1388 aa21.81■■□□□ 1.08
LRRC28-210ENST00000558879 POLR2AP24928 1970 aaKnown RBP21.8■■□□□ 1.08
LRRC28-210ENST00000558879 RPS8P62241 208 aaKnown RBP21.8■■□□□ 1.08
LRRC28-210ENST00000558879 CXCL9Q07325 125 aa21.8■■□□□ 1.08
LRRC28-210ENST00000558879 EAPPQ56P03 285 aaPredicted RBP21.8■■□□□ 1.08
LRRC28-210ENST00000558879 JARID2Q92833 1246 aaPredicted RBP21.8■■□□□ 1.08
LRRC28-210ENST00000558879 YDJCA8MPS7 323 aa21.79■■□□□ 1.08
LRRC28-210ENST00000558879 ITGBL1O95965 494 aaPredicted RBP21.79■■□□□ 1.08
LRRC28-210ENST00000558879 CTSWP56202 376 aa21.79■■□□□ 1.08
LRRC28-210ENST00000558879 GPSM2P81274 684 aa21.79■■□□□ 1.08
LRRC28-210ENST00000558879 MYH16Q9H6N6 1097 aa21.79■■□□□ 1.08
LRRC28-210ENST00000558879 PODXL2Q9NZ53 605 aa21.79■■□□□ 1.08
LRRC28-210ENST00000558879 LMOD1P29536 600 aaPredicted RBP21.78■■□□□ 1.08
LRRC28-210ENST00000558879 CREBZFQ9NS37 354 aa21.78■■□□□ 1.08
LRRC28-210ENST00000558879 POLLQ9UGP5 575 aa21.78■■□□□ 1.08
LRRC28-210ENST00000558879 EPS15P42566 896 aa21.77■■□□□ 1.08
LRRC28-210ENST00000558879 FKBP5Q13451 457 aaPredicted RBP21.77■■□□□ 1.08
LRRC28-210ENST00000558879 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
LRRC28-210ENST00000558879 GPRC5DQ9NZD1 345 aa21.77■■□□□ 1.08
LRRC28-210ENST00000558879 NSFL1CQ9UNZ2 370 aaKnown RBP21.77■■□□□ 1.08
LRRC28-210ENST00000558879 THSD7BQ9C0I4 1608 aa21.77■■□□□ 1.07
LRRC28-210ENST00000558879 H7C1W4 665 aa21.76■■□□□ 1.07
LRRC28-210ENST00000558879 WASHC4Q2M389 1173 aa21.76■■□□□ 1.07
LRRC28-210ENST00000558879 CIAPIN1Q6FI81 312 aa21.76■■□□□ 1.07
LRRC28-210ENST00000558879 TTLL11Q8NHH1 800 aa21.76■■□□□ 1.07
LRRC28-210ENST00000558879 TBC1D16Q8TBP0 767 aa21.76■■□□□ 1.07
LRRC28-210ENST00000558879 CASP7P55210 303 aa21.75■■□□□ 1.07
LRRC28-210ENST00000558879 GCKRQ14397 625 aa21.75■■□□□ 1.07
LRRC28-210ENST00000558879 LINS1Q8NG48 757 aa21.75■■□□□ 1.07
LRRC28-210ENST00000558879 CCDC85AQ96PX6 553 aaPredicted RBP21.75■■□□□ 1.07
LRRC28-210ENST00000558879 PLA2G12BQ9BX93 195 aa21.75■■□□□ 1.07
LRRC28-210ENST00000558879 ZNF609O15014 1411 aa21.74■■□□□ 1.07
LRRC28-210ENST00000558879 USP50Q70EL3 339 aaPredicted RBP21.74■■□□□ 1.07
LRRC28-210ENST00000558879 UBE3BQ7Z3V4 1068 aa21.74■■□□□ 1.07
LRRC28-210ENST00000558879 EYA3Q99504 573 aa21.74■■□□□ 1.07
LRRC28-210ENST00000558879 PCNTO95613 3336 aa21.74■■□□□ 1.07
LRRC28-210ENST00000558879 RAD17O75943 681 aa21.73■■□□□ 1.07
LRRC28-210ENST00000558879 GMPSP49915 693 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms