RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 AOC3Q16853 763 aa22.26■■□□□ 1.15
CHGA-206ENST00000556876 PRDM10Q9NQV6 1147 aa22.26■■□□□ 1.15
CHGA-206ENST00000556876 CTCFP49711 727 aaPredicted RBP22.25■■□□□ 1.15
CHGA-206ENST00000556876 VEGFBP49765 207 aa22.25■■□□□ 1.15
CHGA-206ENST00000556876 MAP2K1Q02750 393 aaPredicted RBP22.25■■□□□ 1.15
CHGA-206ENST00000556876 GPRC5DQ9NZD1 345 aa22.25■■□□□ 1.15
CHGA-206ENST00000556876 EPS15P42566 896 aa22.24■■□□□ 1.15
CHGA-206ENST00000556876 ECE1P42892 770 aa22.24■■□□□ 1.15
CHGA-206ENST00000556876 GNAI1P63096 354 aa22.24■■□□□ 1.15
CHGA-206ENST00000556876 SF3B3Q15393 1217 aaKnown RBP22.24■■□□□ 1.15
CHGA-206ENST00000556876 DUSP27Q5VZP5 1158 aa22.24■■□□□ 1.15
CHGA-206ENST00000556876 CIAPIN1Q6FI81 312 aa22.24■■□□□ 1.15
CHGA-206ENST00000556876 ISCA1Q9BUE6 129 aa22.24■■□□□ 1.15
CHGA-206ENST00000556876 PRKRIP1Q9H875 184 aaPredicted RBP22.24■■□□□ 1.15
CHGA-206ENST00000556876 ABT1Q9ULW3 272 aaKnown RBP22.24■■□□□ 1.15
CHGA-206ENST00000556876 CXCL9Q07325 125 aa22.23■■□□□ 1.15
CHGA-206ENST00000556876 ZC3H15Q8WU90 426 aaKnown RBP22.23■■□□□ 1.15
CHGA-206ENST00000556876 IFT57Q9NWB7 429 aa22.23■■□□□ 1.15
CHGA-206ENST00000556876 GOLGA2Q08379 1002 aa22.22■■□□□ 1.15
CHGA-206ENST00000556876 KRT24Q2M2I5 525 aa22.21■■□□□ 1.15
CHGA-206ENST00000556876 BCL2L13Q9BXK5 485 aa22.21■■□□□ 1.15
CHGA-206ENST00000556876 RIC3Q7Z5B4 369 aa22.2■■□□□ 1.14
CHGA-206ENST00000556876 WBP1LQ9NX94 342 aa22.2■■□□□ 1.14
CHGA-206ENST00000556876 ZNF853P0CG23 659 aa22.19■■□□□ 1.14
CHGA-206ENST00000556876 FAM89AQ96GI7 184 aa22.19■■□□□ 1.14
CHGA-206ENST00000556876 EYA3Q99504 573 aa22.19■■□□□ 1.14
CHGA-206ENST00000556876 MBIPQ9NS73 344 aa22.19■■□□□ 1.14
CHGA-206ENST00000556876 WDR33Q9C0J8 1336 aaKnown RBP22.19■■□□□ 1.14
CHGA-206ENST00000556876 H7C1D1 291 aa22.18■■□□□ 1.14
CHGA-206ENST00000556876 FOXN1O15353 648 aa22.18■■□□□ 1.14
CHGA-206ENST00000556876 DDX58O95786 925 aaKnown RBP22.18■■□□□ 1.14
CHGA-206ENST00000556876 GMPSP49915 693 aaPredicted RBP22.18■■□□□ 1.14
CHGA-206ENST00000556876 WASHC4Q2M389 1173 aa22.18■■□□□ 1.14
CHGA-206ENST00000556876 PGAP2Q9UHJ9 254 aa22.18■■□□□ 1.14
CHGA-206ENST00000556876 ADAMTSL1Q8N6G6 1762 aa22.17■■□□□ 1.14
CHGA-206ENST00000556876 IRS4O14654 1257 aaPredicted RBP22.17■■□□□ 1.14
CHGA-206ENST00000556876 ZBTB38Q8NAP3 1195 aaPredicted RBP22.17■■□□□ 1.14
CHGA-206ENST00000556876 DPF2Q92785 391 aa22.17■■□□□ 1.14
CHGA-206ENST00000556876 BEGAINQ9BUH8 593 aa22.17■■□□□ 1.14
CHGA-206ENST00000556876 NSFL1CQ9UNZ2 370 aaKnown RBP22.17■■□□□ 1.14
CHGA-206ENST00000556876 ATP5J2-PTCD1G3V325 749 aa22.16■■□□□ 1.14
CHGA-206ENST00000556876 APAF1O14727 1248 aa22.16■■□□□ 1.14
CHGA-206ENST00000556876 RPS8P62241 208 aaKnown RBP22.16■■□□□ 1.14
CHGA-206ENST00000556876 CCDC191Q8NCU4 936 aa22.16■■□□□ 1.14
CHGA-206ENST00000556876 HHIPL1Q96JK4 782 aa22.16■■□□□ 1.14
CHGA-206ENST00000556876 COL4A5P29400 1685 aa22.16■■□□□ 1.14
CHGA-206ENST00000556876 RAD17O75943 681 aa22.15■■□□□ 1.14
CHGA-206ENST00000556876 RPS12P25398 132 aaKnown RBP22.15■■□□□ 1.14
CHGA-206ENST00000556876 CCDC30Q5VVM6 783 aa22.15■■□□□ 1.14
CHGA-206ENST00000556876 CDC37L1Q7L3B6 337 aa22.15■■□□□ 1.14
CHGA-206ENST00000556876 MAP2K2P36507 400 aa22.14■■□□□ 1.13
CHGA-206ENST00000556876 CNOT7Q9UIV1 285 aaKnown RBP22.14■■□□□ 1.13
CHGA-206ENST00000556876 TLL2Q9Y6L7 1015 aa22.14■■□□□ 1.13
CHGA-206ENST00000556876 C6orf229H3BNL8 230 aa22.13■■□□□ 1.13
CHGA-206ENST00000556876 CCDC152Q4G0S7 254 aa22.13■■□□□ 1.13
CHGA-206ENST00000556876 CAPNS2Q96L46 248 aa22.13■■□□□ 1.13
CHGA-206ENST00000556876 CAPN15O75808 1086 aa22.12■■□□□ 1.13
CHGA-206ENST00000556876 CST9Q5W186 159 aa22.12■■□□□ 1.13
CHGA-206ENST00000556876 PAXIP1Q6ZW49 1069 aaPredicted RBP22.12■■□□□ 1.13
CHGA-206ENST00000556876 CELF1Q92879 486 aaKnown RBP22.12■■□□□ 1.13
CHGA-206ENST00000556876 GPR101Q96P66 508 aaPredicted RBP22.12■■□□□ 1.13
CHGA-206ENST00000556876 ZC3H12CQ9C0D7 883 aaKnown RBP22.12■■□□□ 1.13
CHGA-206ENST00000556876 CWC25Q9NXE8 425 aaPredicted RBP22.11■■□□□ 1.13
CHGA-206ENST00000556876 PODXL2Q9NZ53 605 aa22.11■■□□□ 1.13
CHGA-206ENST00000556876 ANKRD36CQ5JPF3 1778 aa22.1■■□□□ 1.13
CHGA-206ENST00000556876 G3V3G9 751 aa22.1■■□□□ 1.13
CHGA-206ENST00000556876 CA12O43570 354 aa22.1■■□□□ 1.13
CHGA-206ENST00000556876 PDE8AO60658 829 aa22.1■■□□□ 1.13
CHGA-206ENST00000556876 CELF2O95319 508 aaKnown RBP22.1■■□□□ 1.13
CHGA-206ENST00000556876 PCCAP05165 728 aaPredicted RBP22.1■■□□□ 1.13
CHGA-206ENST00000556876 DCAF8Q5TAQ9 597 aa22.1■■□□□ 1.13
CHGA-206ENST00000556876 SLC51AQ86UW1 340 aa22.1■■□□□ 1.13
CHGA-206ENST00000556876 YDJCA8MPS7 323 aa22.09■■□□□ 1.13
CHGA-206ENST00000556876 TRAF5O00463 557 aa22.09■■□□□ 1.13
CHGA-206ENST00000556876 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
CHGA-206ENST00000556876 SAPCD2Q86UD0 394 aa22.09■■□□□ 1.13
CHGA-206ENST00000556876 LBX1P52954 281 aa22.08■■□□□ 1.13
CHGA-206ENST00000556876 GPSM2P81274 684 aa22.08■■□□□ 1.13
CHGA-206ENST00000556876 RTL5Q5HYW3 569 aaPredicted RBP22.08■■□□□ 1.13
CHGA-206ENST00000556876 MICALL2Q8IY33 904 aa22.08■■□□□ 1.13
CHGA-206ENST00000556876 TBC1D16Q8TBP0 767 aa22.08■■□□□ 1.13
CHGA-206ENST00000556876 MYD88Q99836 296 aa22.08■■□□□ 1.13
CHGA-206ENST00000556876 METTL22Q9BUU2 404 aaPredicted RBP22.08■■□□□ 1.13
CHGA-206ENST00000556876 ANKIB1Q9P2G1 1089 aa22.08■■□□□ 1.13
CHGA-206ENST00000556876 POLLQ9UGP5 575 aa22.08■■□□□ 1.13
CHGA-206ENST00000556876 ELL2O00472 640 aaPredicted RBP22.07■■□□□ 1.12
CHGA-206ENST00000556876 NEXNQ0ZGT2 675 aa22.07■■□□□ 1.12
CHGA-206ENST00000556876 CCDC27Q2M243 656 aa22.07■■□□□ 1.12
CHGA-206ENST00000556876 STK31Q9BXU1 1019 aa22.07■■□□□ 1.12
CHGA-206ENST00000556876 PHAXQ9H814 394 aaKnown RBP22.07■■□□□ 1.12
CHGA-206ENST00000556876 PSMD14O00487 310 aa22.06■■□□□ 1.12
CHGA-206ENST00000556876 RIMBP2O15034 1052 aa22.06■■□□□ 1.12
CHGA-206ENST00000556876 GLIS2Q9BZE0 524 aaPredicted RBP22.06■■□□□ 1.12
CHGA-206ENST00000556876 GGA1Q9UJY5 639 aa22.06■■□□□ 1.12
CHGA-206ENST00000556876 LTBP1Q14766 1721 aa22.06■■□□□ 1.12
CHGA-206ENST00000556876 ECE2O60344 883 aa22.05■■□□□ 1.12
CHGA-206ENST00000556876 HSPA8P11142 646 aaKnown RBP22.05■■□□□ 1.12
CHGA-206ENST00000556876 HIRAP54198 1017 aaPredicted RBP22.05■■□□□ 1.12
CHGA-206ENST00000556876 CYP4F22Q6NT55 531 aa22.05■■□□□ 1.12
CHGA-206ENST00000556876 C8orf58Q8NAV2 365 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms