RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
TDP1-215ENST00000556498 CBFA2T2O43439 604 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 PRMT3O60678 531 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 LGR5O75473 907 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 KIF4AO95239 1232 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 AVPP01185 164 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 HSPA5P11021 654 aaKnown RBP7.48□□□□□ -1.21
TDP1-215ENST00000556498 ATP2B4P23634 1241 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 WEE1P30291 646 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 SMTNP53814 917 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 KCNA1Q09470 495 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
TDP1-215ENST00000556498 C1QTNF12Q5T7M4 302 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 DNAJC14Q6Y2X3 702 aaPredicted RBP7.48□□□□□ -1.21
TDP1-215ENST00000556498 PRIMPOLQ96LW4 560 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 STK26Q9P289 416 aa7.48□□□□□ -1.21
TDP1-215ENST00000556498 EEA1Q15075 1411 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 FAM187AA6NFU0 413 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 A6NJY4 79 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 GOLGA6L6A8MZA4 724 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 GOLGA6L22H0YM25 854 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 PES1O00541 588 aaKnown RBP7.47□□□□□ -1.21
TDP1-215ENST00000556498 GUCY2CP25092 1073 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 ABCD1P33897 745 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 RELBQ01201 579 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 MTFR1Q15390 333 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 AMOTL1Q8IY63 956 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 GOLGA6L1Q8N7Z2 621 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 KLHL23Q8NBE8 558 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 C1orf216Q8TAB5 229 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 TSEN34Q9BSV6 310 aaKnown RBP7.47□□□□□ -1.21
TDP1-215ENST00000556498 IRF2BPLQ9H1B7 796 aa7.47□□□□□ -1.21
TDP1-215ENST00000556498 ZNF395Q9H8N7 513 aaPredicted RBP7.47□□□□□ -1.21
TDP1-215ENST00000556498 H0YHG0 523 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 GFRA3O60609 400 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 STK10O94804 968 aaKnown RBP7.46□□□□□ -1.22
TDP1-215ENST00000556498 PAX7P23759 505 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 RIPK4P57078 832 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 FOXK2Q01167 660 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 CENPCQ03188 943 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 ICE2Q659A1 982 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 TBC1D22AQ8WUA7 517 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 CHCHD3Q9NX63 227 aaKnown RBP7.46□□□□□ -1.22
TDP1-215ENST00000556498 CXXC1Q9P0U4 656 aaPredicted RBP7.46□□□□□ -1.22
TDP1-215ENST00000556498 SCHIP1Q9P0W5 487 aaPredicted RBP7.46□□□□□ -1.22
TDP1-215ENST00000556498 PNMA2Q9UL42 364 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 TPX2Q9ULW0 747 aaKnown RBP7.46□□□□□ -1.22
TDP1-215ENST00000556498 ZBED9Q6R2W3 1325 aa7.46□□□□□ -1.22
TDP1-215ENST00000556498 UNC13AQ9UPW8 1703 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 BICDL2A1A5D9 508 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 ANKRD33BA6NCL7 494 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 MEN1O00255 615 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 NRG2O14511 850 aaPredicted RBP7.45□□□□□ -1.22
TDP1-215ENST00000556498 CDK2AP1O14519 115 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 HMMRO75330 724 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 DGAT1O75907 488 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 VDRP11473 427 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 MAGEA8P43361 318 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 NAP1L1P55209 391 aaKnown RBP7.45□□□□□ -1.22
TDP1-215ENST00000556498 TAS1R3Q7RTX0 852 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 CCDC91Q7Z6B0 441 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 ACRBPQ8NEB7 543 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 NLRP3Q96P20 1036 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 TACO1Q9BSH4 297 aaKnown RBP7.45□□□□□ -1.22
TDP1-215ENST00000556498 MAF1Q9H063 256 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 CWC15Q9P013 229 aaKnown RBP7.45□□□□□ -1.22
TDP1-215ENST00000556498 ATAD2Q6PL18 1390 aa7.45□□□□□ -1.22
TDP1-215ENST00000556498 ANKRD18BA2A2Z9 1011 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 UNCXA6NJT0 531 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 SPINT1O43278 529 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 C21orf2O43822 256 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 IGFBP4P22692 258 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 TLR1Q15399 786 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 SF3A1Q15459 793 aaKnown RBP7.44□□□□□ -1.22
TDP1-215ENST00000556498 TXNDC2Q86VQ3 553 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 ANKRD13BQ86YJ7 626 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 GAS2L2Q8NHY3 880 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 SCG3Q8WXD2 468 aaKnown RBP7.44□□□□□ -1.22
TDP1-215ENST00000556498 FHDC1Q9C0D6 1143 aaPredicted RBP7.44□□□□□ -1.22
TDP1-215ENST00000556498 TSPAN10Q9H1Z9 355 aaPredicted RBP7.44□□□□□ -1.22
TDP1-215ENST00000556498 UTP6Q9NYH9 597 aaKnown RBP7.44□□□□□ -1.22
TDP1-215ENST00000556498 SUN2Q9UH99 717 aa7.44□□□□□ -1.22
TDP1-215ENST00000556498 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
TDP1-215ENST00000556498 DDX49Q9Y6V7 483 aaKnown RBP7.44□□□□□ -1.22
TDP1-215ENST00000556498 SCRIBQ14160 1630 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 PEX14O75381 377 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 UPP2O95045 317 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 FLT3P36888 993 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 POU5F1Q01860 360 aaKnown RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 CTC1Q2NKJ3 1217 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 PKDCCQ504Y2 493 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 JAKMIP3Q5VZ66 844 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 EP400NLQ6ZTU2 488 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 ZNF771Q7L3S4 317 aaPredicted RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 PNISRQ8TF01 805 aaKnown RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 DRC1Q96MC2 740 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms