RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CST9Q5W186 159 aa17.32■□□□□ 0.36
TGFB3-204ENST00000556285 NIM1KQ8IY84 436 aa17.32■□□□□ 0.36
TGFB3-204ENST00000556285 PLBD2Q8NHP8 589 aa17.32■□□□□ 0.36
TGFB3-204ENST00000556285 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
TGFB3-204ENST00000556285 SCN9AQ15858 1988 aa17.31■□□□□ 0.36
TGFB3-204ENST00000556285 WDR33Q9C0J8 1336 aaKnown RBP17.31■□□□□ 0.36
TGFB3-204ENST00000556285 APAF1O14727 1248 aa17.31■□□□□ 0.36
TGFB3-204ENST00000556285 CXCL9Q07325 125 aa17.31■□□□□ 0.36
TGFB3-204ENST00000556285 DEFB115Q30KQ5 88 aa17.31■□□□□ 0.36
TGFB3-204ENST00000556285 ISCA1Q9BUE6 129 aa17.31■□□□□ 0.36
TGFB3-204ENST00000556285 BBOX1O75936 387 aa17.3■□□□□ 0.36
TGFB3-204ENST00000556285 HOXB7P09629 217 aa17.3■□□□□ 0.36
TGFB3-204ENST00000556285 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
TGFB3-204ENST00000556285 HSPA8P11142 646 aaKnown RBP17.3■□□□□ 0.36
TGFB3-204ENST00000556285 ANKRD13DQ6ZTN6 518 aa17.3■□□□□ 0.36
TGFB3-204ENST00000556285 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
TGFB3-204ENST00000556285 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
TGFB3-204ENST00000556285 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
TGFB3-204ENST00000556285 YDJCA8MPS7 323 aa17.29■□□□□ 0.36
TGFB3-204ENST00000556285 LMOD1P29536 600 aaPredicted RBP17.29■□□□□ 0.36
TGFB3-204ENST00000556285 RTL5Q5HYW3 569 aaPredicted RBP17.29■□□□□ 0.36
TGFB3-204ENST00000556285 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
TGFB3-204ENST00000556285 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
TGFB3-204ENST00000556285 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
TGFB3-204ENST00000556285 MPNDQ8N594 471 aa17.29■□□□□ 0.36
TGFB3-204ENST00000556285 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
TGFB3-204ENST00000556285 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
TGFB3-204ENST00000556285 GPRC5DQ9NZD1 345 aa17.29■□□□□ 0.36
TGFB3-204ENST00000556285 ABT1Q9ULW3 272 aaKnown RBP17.29■□□□□ 0.36
TGFB3-204ENST00000556285 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
TGFB3-204ENST00000556285 CTCFP49711 727 aaPredicted RBP17.28■□□□□ 0.36
TGFB3-204ENST00000556285 HIRAP54198 1017 aaPredicted RBP17.28■□□□□ 0.36
TGFB3-204ENST00000556285 GRAPQ13588 217 aa17.28■□□□□ 0.36
TGFB3-204ENST00000556285 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
TGFB3-204ENST00000556285 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
TGFB3-204ENST00000556285 TMX4Q9H1E5 349 aaPredicted RBP17.28■□□□□ 0.36
TGFB3-204ENST00000556285 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
TGFB3-204ENST00000556285 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
TGFB3-204ENST00000556285 SUPT20HQ8NEM7 779 aa17.27■□□□□ 0.36
TGFB3-204ENST00000556285 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
TGFB3-204ENST00000556285 HYPKQ9NX55 129 aa17.27■□□□□ 0.36
TGFB3-204ENST00000556285 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
TGFB3-204ENST00000556285 CASP8AP2Q9UKL3 1982 aa17.26■□□□□ 0.35
TGFB3-204ENST00000556285 RAD17O75943 681 aa17.26■□□□□ 0.35
TGFB3-204ENST00000556285 KIAA2012Q0VF49 1180 aa17.26■□□□□ 0.35
TGFB3-204ENST00000556285 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
TGFB3-204ENST00000556285 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
TGFB3-204ENST00000556285 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
TGFB3-204ENST00000556285 VPS33BQ9H267 617 aa17.26■□□□□ 0.35
TGFB3-204ENST00000556285 SPEF2Q9C093 1822 aa17.26■□□□□ 0.35
TGFB3-204ENST00000556285 AOC2O75106 756 aa17.25■□□□□ 0.35
TGFB3-204ENST00000556285 GRM1Q13255 1194 aa17.25■□□□□ 0.35
TGFB3-204ENST00000556285 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
TGFB3-204ENST00000556285 CAPNS2Q96L46 248 aa17.25■□□□□ 0.35
TGFB3-204ENST00000556285 GLIS2Q9BZE0 524 aaPredicted RBP17.25■□□□□ 0.35
TGFB3-204ENST00000556285 TSKSQ9UJT2 592 aa17.25■□□□□ 0.35
TGFB3-204ENST00000556285 PSME4Q14997 1843 aa17.25■□□□□ 0.35
TGFB3-204ENST00000556285 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
TGFB3-204ENST00000556285 SF3B3Q15393 1217 aaKnown RBP17.24■□□□□ 0.35
TGFB3-204ENST00000556285 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
TGFB3-204ENST00000556285 GPR101Q96P66 508 aaPredicted RBP17.24■□□□□ 0.35
TGFB3-204ENST00000556285 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
TGFB3-204ENST00000556285 IFT57Q9NWB7 429 aa17.24■□□□□ 0.35
TGFB3-204ENST00000556285 TLL2Q9Y6L7 1015 aa17.24■□□□□ 0.35
TGFB3-204ENST00000556285 IRS4O14654 1257 aaPredicted RBP17.23■□□□□ 0.35
TGFB3-204ENST00000556285 EGFRP00533 1210 aa17.23■□□□□ 0.35
TGFB3-204ENST00000556285 GNAI1P63096 354 aa17.23■□□□□ 0.35
TGFB3-204ENST00000556285 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
TGFB3-204ENST00000556285 CIAPIN1Q6FI81 312 aa17.23■□□□□ 0.35
TGFB3-204ENST00000556285 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
TGFB3-204ENST00000556285 JARID2Q92833 1246 aaPredicted RBP17.23■□□□□ 0.35
TGFB3-204ENST00000556285 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
TGFB3-204ENST00000556285 GPSM2P81274 684 aa17.22■□□□□ 0.35
TGFB3-204ENST00000556285 PAXIP1Q6ZW49 1069 aaPredicted RBP17.22■□□□□ 0.35
TGFB3-204ENST00000556285 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
TGFB3-204ENST00000556285 KCNQ5Q9NR82 932 aa17.22■□□□□ 0.35
TGFB3-204ENST00000556285 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
TGFB3-204ENST00000556285 ZIC5Q96T25 663 aa17.21■□□□□ 0.35
TGFB3-204ENST00000556285 MYD88Q99836 296 aa17.21■□□□□ 0.35
TGFB3-204ENST00000556285 POLLQ9UGP5 575 aa17.21■□□□□ 0.35
TGFB3-204ENST00000556285 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
TGFB3-204ENST00000556285 NSFL1CQ9UNZ2 370 aaKnown RBP17.21■□□□□ 0.35
TGFB3-204ENST00000556285 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
TGFB3-204ENST00000556285 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
TGFB3-204ENST00000556285 TMC4Q7Z404 712 aa17.2■□□□□ 0.34
TGFB3-204ENST00000556285 SAPCD2Q86UD0 394 aa17.2■□□□□ 0.34
TGFB3-204ENST00000556285 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
TGFB3-204ENST00000556285 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
TGFB3-204ENST00000556285 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
TGFB3-204ENST00000556285 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
TGFB3-204ENST00000556285 TNIP1Q15025 636 aa17.19■□□□□ 0.34
TGFB3-204ENST00000556285 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
TGFB3-204ENST00000556285 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
TGFB3-204ENST00000556285 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
TGFB3-204ENST00000556285 ABHD8Q96I13 439 aa17.19■□□□□ 0.34
TGFB3-204ENST00000556285 MYH3P11055 1940 aa17.18■□□□□ 0.34
TGFB3-204ENST00000556285 C6orf229H3BNL8 230 aa17.18■□□□□ 0.34
TGFB3-204ENST00000556285 PSMD14O00487 310 aa17.18■□□□□ 0.34
TGFB3-204ENST00000556285 RPS8P62241 208 aaKnown RBP17.18■□□□□ 0.34
TGFB3-204ENST00000556285 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms