RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 CHD1LQ86WJ1 897 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 MYH13Q9UKX3 1938 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 ABCC12Q96J65 1359 aa11.93□□□□□ -0.5
SIX1-204ENST00000555627 RGL2O15211 777 aa11.93□□□□□ -0.5
SIX1-204ENST00000555627 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
SIX1-204ENST00000555627 PCCAP05165 728 aaPredicted RBP11.93□□□□□ -0.5
SIX1-204ENST00000555627 GPTP24298 496 aa11.93□□□□□ -0.5
SIX1-204ENST00000555627 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
SIX1-204ENST00000555627 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
SIX1-204ENST00000555627 DLEC1Q9Y238 1755 aa11.92□□□□□ -0.5
SIX1-204ENST00000555627 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
SIX1-204ENST00000555627 AKAP11Q9UKA4 1901 aa11.92□□□□□ -0.5
SIX1-204ENST00000555627 GNPATO15228 680 aa11.92□□□□□ -0.5
SIX1-204ENST00000555627 SRGAP3O43295 1099 aa11.92□□□□□ -0.5
SIX1-204ENST00000555627 SMARCA5O60264 1052 aaPredicted RBP11.92□□□□□ -0.5
SIX1-204ENST00000555627 MLLT1Q03111 559 aaPredicted RBP11.92□□□□□ -0.5
SIX1-204ENST00000555627 OTUD7AQ8TE49 926 aaPredicted RBP11.92□□□□□ -0.5
SIX1-204ENST00000555627 PLA2G12BQ9BX93 195 aa11.92□□□□□ -0.5
SIX1-204ENST00000555627 NOP58Q9Y2X3 529 aaKnown RBP11.92□□□□□ -0.5
SIX1-204ENST00000555627 DOCK2Q92608 1830 aa11.92□□□□□ -0.5
SIX1-204ENST00000555627 ZNF609O15014 1411 aa11.92□□□□□ -0.5
SIX1-204ENST00000555627 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
SIX1-204ENST00000555627 NTSR2O95665 410 aa11.91□□□□□ -0.5
SIX1-204ENST00000555627 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
SIX1-204ENST00000555627 SLC27A3Q5K4L6 730 aa11.91□□□□□ -0.5
SIX1-204ENST00000555627 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
SIX1-204ENST00000555627 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
SIX1-204ENST00000555627 PA2G4Q9UQ80 394 aaKnown RBP11.91□□□□□ -0.5
SIX1-204ENST00000555627 ZNF827Q17R98 1081 aa11.9□□□□□ -0.5
SIX1-204ENST00000555627 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
SIX1-204ENST00000555627 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.5
SIX1-204ENST00000555627 NARFQ9UHQ1 456 aa11.9□□□□□ -0.5
SIX1-204ENST00000555627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
SIX1-204ENST00000555627 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
SIX1-204ENST00000555627 KIF13BQ9NQT8 1826 aa11.89□□□□□ -0.51
SIX1-204ENST00000555627 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
SIX1-204ENST00000555627 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
SIX1-204ENST00000555627 PTPN12Q05209 780 aaKnown RBP11.89□□□□□ -0.51
SIX1-204ENST00000555627 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
SIX1-204ENST00000555627 SUSD4Q5VX71 490 aa11.89□□□□□ -0.51
SIX1-204ENST00000555627 PLEKHM2Q8IWE5 1019 aa11.89□□□□□ -0.51
SIX1-204ENST00000555627 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
SIX1-204ENST00000555627 USPL1Q5W0Q7 1092 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 LMBR1LQ6UX01 489 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 FAM89AQ96GI7 184 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 AK7Q96M32 723 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
SIX1-204ENST00000555627 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
SIX1-204ENST00000555627 APBB1O00213 710 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 SURF6O75683 361 aaKnown RBP11.87□□□□□ -0.51
SIX1-204ENST00000555627 SASH1O94885 1247 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 CSF1RP07333 972 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 PARP10Q53GL7 1025 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 CLEC4GQ6UXB4 293 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
SIX1-204ENST00000555627 RHPN1Q8TCX5 695 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 ARHGEF1Q92888 912 aaKnown RBP11.87□□□□□ -0.51
SIX1-204ENST00000555627 LRRCC1Q9C099 1032 aa11.87□□□□□ -0.51
SIX1-204ENST00000555627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
SIX1-204ENST00000555627 RAB11FIP3O75154 756 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 SSFA2P28290 1259 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 CTSWP56202 376 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 BACH2Q9BYV9 841 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 NMRK2Q9NPI5 230 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
SIX1-204ENST00000555627 ZNF652Q9Y2D9 606 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
SIX1-204ENST00000555627 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 IRS4O14654 1257 aaPredicted RBP11.85□□□□□ -0.51
SIX1-204ENST00000555627 PHF14O94880 888 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 FSTL1Q12841 308 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 OSBPL3Q9H4L5 887 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 IL1RAPL2Q9NP60 686 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 ZNF646O15015 1829 aaPredicted RBP11.85□□□□□ -0.51
SIX1-204ENST00000555627 AOX1Q06278 1338 aa11.85□□□□□ -0.51
SIX1-204ENST00000555627 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
SIX1-204ENST00000555627 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
SIX1-204ENST00000555627 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
SIX1-204ENST00000555627 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
SIX1-204ENST00000555627 TTLL11Q8NHH1 800 aa11.84□□□□□ -0.51
SIX1-204ENST00000555627 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
SIX1-204ENST00000555627 SIL1Q9H173 461 aa11.84□□□□□ -0.51
SIX1-204ENST00000555627 GREM2Q9H772 168 aa11.84□□□□□ -0.51
SIX1-204ENST00000555627 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
SIX1-204ENST00000555627 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
SIX1-204ENST00000555627 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
SIX1-204ENST00000555627 PDE8AO60658 829 aa11.83□□□□□ -0.52
SIX1-204ENST00000555627 GYS1P13807 737 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms