RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 GRAPQ13588 217 aa17.37■□□□□ 0.37
TUBB3-208ENST00000555576 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
TUBB3-208ENST00000555576 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
TUBB3-208ENST00000555576 AIDAQ96BJ3 306 aa17.37■□□□□ 0.37
TUBB3-208ENST00000555576 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
TUBB3-208ENST00000555576 CDHR2Q9BYE9 1310 aa17.37■□□□□ 0.37
TUBB3-208ENST00000555576 LBX1P52954 281 aa17.36■□□□□ 0.37
TUBB3-208ENST00000555576 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
TUBB3-208ENST00000555576 TRMT112Q9UI30 125 aaKnown RBP17.36■□□□□ 0.37
TUBB3-208ENST00000555576 YDJCA8MPS7 323 aa17.35■□□□□ 0.37
TUBB3-208ENST00000555576 HOXB7P09629 217 aa17.35■□□□□ 0.37
TUBB3-208ENST00000555576 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-208ENST00000555576 MPNDQ8N594 471 aa17.35■□□□□ 0.37
TUBB3-208ENST00000555576 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
TUBB3-208ENST00000555576 ISCA1Q9BUE6 129 aa17.35■□□□□ 0.37
TUBB3-208ENST00000555576 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
TUBB3-208ENST00000555576 TLL2Q9Y6L7 1015 aa17.35■□□□□ 0.37
TUBB3-208ENST00000555576 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
TUBB3-208ENST00000555576 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
TUBB3-208ENST00000555576 DDX46Q7L014 1031 aaKnown RBP17.34■□□□□ 0.37
TUBB3-208ENST00000555576 PLBD2Q8NHP8 589 aa17.34■□□□□ 0.37
TUBB3-208ENST00000555576 TMX4Q9H1E5 349 aaPredicted RBP17.34■□□□□ 0.37
TUBB3-208ENST00000555576 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.36
TUBB3-208ENST00000555576 HDGFL1Q5TGJ6 251 aa17.33■□□□□ 0.36
TUBB3-208ENST00000555576 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
TUBB3-208ENST00000555576 CYP4F22Q6NT55 531 aa17.33■□□□□ 0.36
TUBB3-208ENST00000555576 CAPNS2Q96L46 248 aa17.33■□□□□ 0.36
TUBB3-208ENST00000555576 RAD17O75943 681 aa17.32■□□□□ 0.36
TUBB3-208ENST00000555576 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
TUBB3-208ENST00000555576 TRPM4Q8TD43 1214 aa17.32■□□□□ 0.36
TUBB3-208ENST00000555576 ZNF428Q96B54 188 aa17.32■□□□□ 0.36
TUBB3-208ENST00000555576 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
TUBB3-208ENST00000555576 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
TUBB3-208ENST00000555576 ANKRD13DQ6ZTN6 518 aa17.31■□□□□ 0.36
TUBB3-208ENST00000555576 SAPCD2Q86UD0 394 aa17.31■□□□□ 0.36
TUBB3-208ENST00000555576 CELF1Q92879 486 aaKnown RBP17.31■□□□□ 0.36
TUBB3-208ENST00000555576 FAM89AQ96GI7 184 aa17.31■□□□□ 0.36
TUBB3-208ENST00000555576 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
TUBB3-208ENST00000555576 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-208ENST00000555576 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-208ENST00000555576 ADAMTS8Q9UP79 889 aa17.31■□□□□ 0.36
TUBB3-208ENST00000555576 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
TUBB3-208ENST00000555576 ECE1P42892 770 aa17.3■□□□□ 0.36
TUBB3-208ENST00000555576 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
TUBB3-208ENST00000555576 ZC3H15Q8WU90 426 aaKnown RBP17.3■□□□□ 0.36
TUBB3-208ENST00000555576 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
TUBB3-208ENST00000555576 ATP5J2-PTCD1G3V325 749 aa17.29■□□□□ 0.36
TUBB3-208ENST00000555576 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
TUBB3-208ENST00000555576 TNIP1Q15025 636 aa17.29■□□□□ 0.36
TUBB3-208ENST00000555576 HHIPL1Q96JK4 782 aa17.29■□□□□ 0.36
TUBB3-208ENST00000555576 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-208ENST00000555576 MBIPQ9NS73 344 aa17.29■□□□□ 0.36
TUBB3-208ENST00000555576 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
TUBB3-208ENST00000555576 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
TUBB3-208ENST00000555576 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
TUBB3-208ENST00000555576 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
TUBB3-208ENST00000555576 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
TUBB3-208ENST00000555576 POLLQ9UGP5 575 aa17.28■□□□□ 0.36
TUBB3-208ENST00000555576 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
TUBB3-208ENST00000555576 AOC2O75106 756 aa17.27■□□□□ 0.36
TUBB3-208ENST00000555576 GPSM2P81274 684 aa17.27■□□□□ 0.36
TUBB3-208ENST00000555576 MICALL2Q8IY33 904 aa17.27■□□□□ 0.36
TUBB3-208ENST00000555576 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.36
TUBB3-208ENST00000555576 ZBTB12Q9Y330 459 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-208ENST00000555576 PSMD14O00487 310 aa17.26■□□□□ 0.35
TUBB3-208ENST00000555576 EGFRP00533 1210 aa17.26■□□□□ 0.35
TUBB3-208ENST00000555576 MAP2K2P36507 400 aa17.26■□□□□ 0.35
TUBB3-208ENST00000555576 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
TUBB3-208ENST00000555576 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-208ENST00000555576 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
TUBB3-208ENST00000555576 IRS4O14654 1257 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-208ENST00000555576 GRM1Q13255 1194 aa17.25■□□□□ 0.35
TUBB3-208ENST00000555576 RTL5Q5HYW3 569 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-208ENST00000555576 CDC37L1Q7L3B6 337 aa17.25■□□□□ 0.35
TUBB3-208ENST00000555576 DPF2Q92785 391 aa17.25■□□□□ 0.35
TUBB3-208ENST00000555576 ABHD8Q96I13 439 aa17.25■□□□□ 0.35
TUBB3-208ENST00000555576 DBNDD1Q9H9R9 158 aa17.25■□□□□ 0.35
TUBB3-208ENST00000555576 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
TUBB3-208ENST00000555576 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
TUBB3-208ENST00000555576 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-208ENST00000555576 KCNQ5Q9NR82 932 aa17.24■□□□□ 0.35
TUBB3-208ENST00000555576 IFT57Q9NWB7 429 aa17.24■□□□□ 0.35
TUBB3-208ENST00000555576 PSME4Q14997 1843 aa17.24■□□□□ 0.35
TUBB3-208ENST00000555576 ZNF609O15014 1411 aa17.23■□□□□ 0.35
TUBB3-208ENST00000555576 ECE2O60344 883 aa17.23■□□□□ 0.35
TUBB3-208ENST00000555576 DLK2Q6UY11 383 aa17.23■□□□□ 0.35
TUBB3-208ENST00000555576 SAMD7Q7Z3H4 446 aa17.23■□□□□ 0.35
TUBB3-208ENST00000555576 ZBTB38Q8NAP3 1195 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-208ENST00000555576 TBC1D16Q8TBP0 767 aa17.23■□□□□ 0.35
TUBB3-208ENST00000555576 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
TUBB3-208ENST00000555576 H7C1D1 291 aa17.22■□□□□ 0.35
TUBB3-208ENST00000555576 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-208ENST00000555576 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
TUBB3-208ENST00000555576 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
TUBB3-208ENST00000555576 SEC31BQ9NQW1 1179 aa17.22■□□□□ 0.35
TUBB3-208ENST00000555576 TSKSQ9UJT2 592 aa17.22■□□□□ 0.35
TUBB3-208ENST00000555576 POLR2AP24928 1970 aaKnown RBP17.21■□□□□ 0.35
TUBB3-208ENST00000555576 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
TUBB3-208ENST00000555576 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
TUBB3-208ENST00000555576 TBC1D10BQ4KMP7 808 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms