RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 UBE3BQ7Z3V4 1068 aa15.36■□□□□ 0.05
SRP54-206ENST00000555317 TMC4Q7Z404 712 aa15.36■□□□□ 0.05
SRP54-206ENST00000555317 TRMT2AQ8IZ69 625 aaKnown RBP15.36■□□□□ 0.05
SRP54-206ENST00000555317 SSH1Q8WYL5 1049 aa15.36■□□□□ 0.05
SRP54-206ENST00000555317 JARID2Q92833 1246 aaPredicted RBP15.36■□□□□ 0.05
SRP54-206ENST00000555317 BCL2L13Q9BXK5 485 aa15.36■□□□□ 0.05
SRP54-206ENST00000555317 DICER1Q9UPY3 1922 aaKnown RBP15.36■□□□□ 0.05
SRP54-206ENST00000555317 CDHR2Q9BYE9 1310 aa15.36■□□□□ 0.05
SRP54-206ENST00000555317 GCKRQ14397 625 aa15.35■□□□□ 0.05
SRP54-206ENST00000555317 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
SRP54-206ENST00000555317 MRPL50Q8N5N7 158 aaKnown RBP15.35■□□□□ 0.05
SRP54-206ENST00000555317 PTPRCP08575 1304 aa15.35■□□□□ 0.05
SRP54-206ENST00000555317 KDM2BQ8NHM5 1336 aa15.35■□□□□ 0.05
SRP54-206ENST00000555317 TAF1P21675 1872 aa15.34■□□□□ 0.05
SRP54-206ENST00000555317 PSMD1Q99460 953 aa15.34■□□□□ 0.05
SRP54-206ENST00000555317 ZNF277Q9NRM2 450 aaPredicted RBP15.34■□□□□ 0.05
SRP54-206ENST00000555317 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
SRP54-206ENST00000555317 CTSWP56202 376 aa15.33■□□□□ 0.04
SRP54-206ENST00000555317 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
SRP54-206ENST00000555317 SRCIN1Q9C0H9 1055 aa15.33■□□□□ 0.04
SRP54-206ENST00000555317 C9orf78Q9NZ63 289 aaPredicted RBP15.33■□□□□ 0.04
SRP54-206ENST00000555317 ZBED9Q6R2W3 1325 aa15.33■□□□□ 0.04
SRP54-206ENST00000555317 ALDH1L1O75891 902 aa15.32■□□□□ 0.04
SRP54-206ENST00000555317 BEND3Q5T5X7 828 aa15.32■□□□□ 0.04
SRP54-206ENST00000555317 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
SRP54-206ENST00000555317 SP8Q8IXZ3 490 aa15.32■□□□□ 0.04
SRP54-206ENST00000555317 SUPT20HQ8NEM7 779 aa15.32■□□□□ 0.04
SRP54-206ENST00000555317 H7C1W4 665 aa15.31■□□□□ 0.04
SRP54-206ENST00000555317 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
SRP54-206ENST00000555317 PRELPP51888 382 aa15.31■□□□□ 0.04
SRP54-206ENST00000555317 DPY19L2Q6NUT2 758 aa15.31■□□□□ 0.04
SRP54-206ENST00000555317 MPNDQ8N594 471 aa15.31■□□□□ 0.04
SRP54-206ENST00000555317 JDP2Q8WYK2 163 aa15.31■□□□□ 0.04
SRP54-206ENST00000555317 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
SRP54-206ENST00000555317 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
SRP54-206ENST00000555317 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
SRP54-206ENST00000555317 LARGE2Q8N3Y3 721 aa15.3■□□□□ 0.04
SRP54-206ENST00000555317 CELF1Q92879 486 aaKnown RBP15.3■□□□□ 0.04
SRP54-206ENST00000555317 KIF16BQ96L93 1317 aa15.3■□□□□ 0.04
SRP54-206ENST00000555317 GRM8O00222 908 aa15.29■□□□□ 0.04
SRP54-206ENST00000555317 C16orf71Q8IYS4 520 aaPredicted RBP15.29■□□□□ 0.04
SRP54-206ENST00000555317 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
SRP54-206ENST00000555317 CHMP3Q9Y3E7 222 aa15.29■□□□□ 0.04
SRP54-206ENST00000555317 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
SRP54-206ENST00000555317 GLTPD2A6NH11 291 aa15.28■□□□□ 0.04
SRP54-206ENST00000555317 PPIP5K2O43314 1243 aa15.28■□□□□ 0.04
SRP54-206ENST00000555317 RARSP54136 660 aaKnown RBP15.28■□□□□ 0.04
SRP54-206ENST00000555317 TTLL11Q8NHH1 800 aa15.28■□□□□ 0.04
SRP54-206ENST00000555317 PLA2G12BQ9BX93 195 aa15.28■□□□□ 0.04
SRP54-206ENST00000555317 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
SRP54-206ENST00000555317 SPEF2Q9C093 1822 aa15.28■□□□□ 0.04
SRP54-206ENST00000555317 SNED1Q8TER0 1413 aa15.27■□□□□ 0.04
SRP54-206ENST00000555317 RTL9Q8NET4 1388 aa15.27■□□□□ 0.04
SRP54-206ENST00000555317 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
SRP54-206ENST00000555317 NIM1KQ8IY84 436 aa15.27■□□□□ 0.04
SRP54-206ENST00000555317 VPS33BQ9H267 617 aa15.27■□□□□ 0.04
SRP54-206ENST00000555317 GREM2Q9H772 168 aa15.27■□□□□ 0.04
SRP54-206ENST00000555317 ANKIB1Q9P2G1 1089 aa15.27■□□□□ 0.04
SRP54-206ENST00000555317 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
SRP54-206ENST00000555317 NSFL1CQ9UNZ2 370 aaKnown RBP15.27■□□□□ 0.04
SRP54-206ENST00000555317 C6orf229H3BNL8 230 aa15.26■□□□□ 0.03
SRP54-206ENST00000555317 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
SRP54-206ENST00000555317 CASP7P55210 303 aa15.26■□□□□ 0.03
SRP54-206ENST00000555317 EIF6P56537 245 aaKnown RBP15.26■□□□□ 0.03
SRP54-206ENST00000555317 SLC51AQ86UW1 340 aa15.26■□□□□ 0.03
SRP54-206ENST00000555317 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
SRP54-206ENST00000555317 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
SRP54-206ENST00000555317 ITGA6P23229 1130 aa15.25■□□□□ 0.03
SRP54-206ENST00000555317 CCT4P50991 539 aaKnown RBP15.25■□□□□ 0.03
SRP54-206ENST00000555317 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
SRP54-206ENST00000555317 AOC3Q16853 763 aa15.25■□□□□ 0.03
SRP54-206ENST00000555317 FAM161AQ3B820 660 aa15.25■□□□□ 0.03
SRP54-206ENST00000555317 EYA3Q99504 573 aa15.25■□□□□ 0.03
SRP54-206ENST00000555317 MPHOSPH8Q99549 860 aa15.25■□□□□ 0.03
SRP54-206ENST00000555317 RTFDC1Q9BY42 306 aaPredicted RBP15.25■□□□□ 0.03
SRP54-206ENST00000555317 GPSM2P81274 684 aa15.24■□□□□ 0.03
SRP54-206ENST00000555317 IFIT5Q13325 482 aaKnown RBP15.24■□□□□ 0.03
SRP54-206ENST00000555317 TAF7LQ5H9L4 462 aa15.24■□□□□ 0.03
SRP54-206ENST00000555317 FRAT1Q92837 279 aaPredicted RBP15.24■□□□□ 0.03
SRP54-206ENST00000555317 RRAGCQ9HB90 399 aa15.24■□□□□ 0.03
SRP54-206ENST00000555317 GGA1Q9UJY5 639 aa15.24■□□□□ 0.03
SRP54-206ENST00000555317 XDHP47989 1333 aa15.23■□□□□ 0.03
SRP54-206ENST00000555317 COL4A1P02462 1669 aa15.23■□□□□ 0.03
SRP54-206ENST00000555317 UFL1O94874 794 aa15.23■□□□□ 0.03
SRP54-206ENST00000555317 VEGFAP15692 232 aaPredicted RBP15.23■□□□□ 0.03
SRP54-206ENST00000555317 WASHC4Q2M389 1173 aa15.23■□□□□ 0.03
SRP54-206ENST00000555317 CCDC57Q2TAC2 916 aa15.23■□□□□ 0.03
SRP54-206ENST00000555317 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
SRP54-206ENST00000555317 BSDC1Q9NW68 430 aaPredicted RBP15.23■□□□□ 0.03
SRP54-206ENST00000555317 ZNF541Q9H0D2 1346 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 IQCA1LA6NCM1 817 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 G3V3G9 751 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 FZD9O00144 591 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 KIF3CO14782 793 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 DDNO94850 711 aaPredicted RBP15.22■□□□□ 0.03
SRP54-206ENST00000555317 CSF1RP07333 972 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 KIAA2012Q0VF49 1180 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 DCAF8Q5TAQ9 597 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 LMBR1LQ6UX01 489 aa15.22■□□□□ 0.03
SRP54-206ENST00000555317 GJA3Q9Y6H8 435 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms