RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 RASSF10A6NK89 507 aa20.42■□□□□ 0.86
ARHGEF40-205ENST00000555052 DUSP27Q5VZP5 1158 aa20.42■□□□□ 0.86
ARHGEF40-205ENST00000555052 DPP8Q6V1X1 898 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF40-205ENST00000555052 MBIPQ9NS73 344 aa20.42■□□□□ 0.86
ARHGEF40-205ENST00000555052 ZNRF3Q9ULT6 936 aa20.42■□□□□ 0.86
ARHGEF40-205ENST00000555052 CXCL9Q07325 125 aa20.41■□□□□ 0.86
ARHGEF40-205ENST00000555052 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
ARHGEF40-205ENST00000555052 USP50Q70EL3 339 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF40-205ENST00000555052 MPNDQ8N594 471 aa20.41■□□□□ 0.86
ARHGEF40-205ENST00000555052 HYPKQ9NX55 129 aa20.41■□□□□ 0.86
ARHGEF40-205ENST00000555052 TMC4Q7Z404 712 aa20.4■□□□□ 0.86
ARHGEF40-205ENST00000555052 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
ARHGEF40-205ENST00000555052 GPRC5DQ9NZD1 345 aa20.4■□□□□ 0.86
ARHGEF40-205ENST00000555052 ATP5J2-PTCD1G3V325 749 aa20.39■□□□□ 0.85
ARHGEF40-205ENST00000555052 FOXN1O15353 648 aa20.39■□□□□ 0.85
ARHGEF40-205ENST00000555052 TRIM28Q13263 835 aaKnown RBP20.39■□□□□ 0.85
ARHGEF40-205ENST00000555052 SF3B3Q15393 1217 aaKnown RBP20.39■□□□□ 0.85
ARHGEF40-205ENST00000555052 COL4A1P02462 1669 aa20.38■□□□□ 0.85
ARHGEF40-205ENST00000555052 FAM89AQ96GI7 184 aa20.38■□□□□ 0.85
ARHGEF40-205ENST00000555052 ADARB2Q9NS39 739 aaKnown RBP20.38■□□□□ 0.85
ARHGEF40-205ENST00000555052 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
ARHGEF40-205ENST00000555052 TRPM7Q96QT4 1865 aa20.38■□□□□ 0.85
ARHGEF40-205ENST00000555052 CDHR2Q9BYE9 1310 aa20.37■□□□□ 0.85
ARHGEF40-205ENST00000555052 APAF1O14727 1248 aa20.37■□□□□ 0.85
ARHGEF40-205ENST00000555052 GMPSP49915 693 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF40-205ENST00000555052 FMR1Q06787 632 aaKnown RBP eCLIP20.37■□□□□ 0.85
ARHGEF40-205ENST00000555052 DEFB115Q30KQ5 88 aa20.36■□□□□ 0.85
ARHGEF40-205ENST00000555052 CIAPIN1Q6FI81 312 aa20.36■□□□□ 0.85
ARHGEF40-205ENST00000555052 CELF1Q92879 486 aaKnown RBP20.36■□□□□ 0.85
ARHGEF40-205ENST00000555052 WBP1LQ9NX94 342 aa20.36■□□□□ 0.85
ARHGEF40-205ENST00000555052 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
ARHGEF40-205ENST00000555052 GNAI1P63096 354 aa20.35■□□□□ 0.85
ARHGEF40-205ENST00000555052 THSD7BQ9C0I4 1608 aa20.35■□□□□ 0.85
ARHGEF40-205ENST00000555052 TRAF5O00463 557 aa20.34■□□□□ 0.85
ARHGEF40-205ENST00000555052 RAD17O75943 681 aa20.34■□□□□ 0.85
ARHGEF40-205ENST00000555052 CALD1Q05682 793 aaKnown RBP20.34■□□□□ 0.85
ARHGEF40-205ENST00000555052 PRDM10Q9NQV6 1147 aa20.34■□□□□ 0.85
ARHGEF40-205ENST00000555052 ABT1Q9ULW3 272 aaKnown RBP20.34■□□□□ 0.85
ARHGEF40-205ENST00000555052 WDR33Q9C0J8 1336 aaKnown RBP20.33■□□□□ 0.85
ARHGEF40-205ENST00000555052 IRS4O14654 1257 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF40-205ENST00000555052 CAPN15O75808 1086 aa20.33■□□□□ 0.85
ARHGEF40-205ENST00000555052 TNIP1Q15025 636 aa20.33■□□□□ 0.85
ARHGEF40-205ENST00000555052 CST9Q5W186 159 aa20.33■□□□□ 0.85
ARHGEF40-205ENST00000555052 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.85
ARHGEF40-205ENST00000555052 PGAP2Q9UHJ9 254 aa20.33■□□□□ 0.85
ARHGEF40-205ENST00000555052 CTCFP49711 727 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF40-205ENST00000555052 GOLGA2Q08379 1002 aa20.32■□□□□ 0.84
ARHGEF40-205ENST00000555052 RTL5Q5HYW3 569 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF40-205ENST00000555052 AIDAQ96BJ3 306 aa20.32■□□□□ 0.84
ARHGEF40-205ENST00000555052 HIRAP54198 1017 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF40-205ENST00000555052 RIC3Q7Z5B4 369 aa20.31■□□□□ 0.84
ARHGEF40-205ENST00000555052 ZBTB38Q8NAP3 1195 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF40-205ENST00000555052 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
ARHGEF40-205ENST00000555052 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
ARHGEF40-205ENST00000555052 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
ARHGEF40-205ENST00000555052 GPSM2P81274 684 aa20.3■□□□□ 0.84
ARHGEF40-205ENST00000555052 TRPM4Q8TD43 1214 aa20.3■□□□□ 0.84
ARHGEF40-205ENST00000555052 ZC3H15Q8WU90 426 aaKnown RBP20.3■□□□□ 0.84
ARHGEF40-205ENST00000555052 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
ARHGEF40-205ENST00000555052 NSFL1CQ9UNZ2 370 aaKnown RBP20.3■□□□□ 0.84
ARHGEF40-205ENST00000555052 TLL2Q9Y6L7 1015 aa20.3■□□□□ 0.84
ARHGEF40-205ENST00000555052 SHTN1A0MZ66 631 aa20.29■□□□□ 0.84
ARHGEF40-205ENST00000555052 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
ARHGEF40-205ENST00000555052 CAPNS2Q96L46 248 aa20.29■□□□□ 0.84
ARHGEF40-205ENST00000555052 RPS8P62241 208 aaKnown RBP20.28■□□□□ 0.84
ARHGEF40-205ENST00000555052 MAP2K1Q02750 393 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF40-205ENST00000555052 CCDC191Q8NCU4 936 aa20.28■□□□□ 0.84
ARHGEF40-205ENST00000555052 MYD88Q99836 296 aa20.28■□□□□ 0.84
ARHGEF40-205ENST00000555052 GLIS2Q9BZE0 524 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF40-205ENST00000555052 DBNDD1Q9H9R9 158 aa20.28■□□□□ 0.84
ARHGEF40-205ENST00000555052 CNOT7Q9UIV1 285 aaKnown RBP20.28■□□□□ 0.84
ARHGEF40-205ENST00000555052 SCN9AQ15858 1988 aa20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 PSMD14O00487 310 aa20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 HSPA8P11142 646 aaKnown RBP20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 MICALL2Q8IY33 904 aa20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 TBC1D16Q8TBP0 767 aa20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 DPF2Q92785 391 aa20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 SEC31BQ9NQW1 1179 aa20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.84
ARHGEF40-205ENST00000555052 RTL9Q8NET4 1388 aa20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 ECE1P42892 770 aa20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 LBX1P52954 281 aa20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 CYP4F22Q6NT55 531 aa20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 SAPCD2Q86UD0 394 aa20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 TSPYL6Q8N831 410 aa20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 METTL22Q9BUU2 404 aaPredicted RBP20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 ZBTB12Q9Y330 459 aaPredicted RBP20.26■□□□□ 0.83
ARHGEF40-205ENST00000555052 H7C1D1 291 aa20.25■□□□□ 0.83
ARHGEF40-205ENST00000555052 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
ARHGEF40-205ENST00000555052 CELF2O95319 508 aaKnown RBP20.25■□□□□ 0.83
ARHGEF40-205ENST00000555052 CCDC30Q5VVM6 783 aa20.25■□□□□ 0.83
ARHGEF40-205ENST00000555052 GPR101Q96P66 508 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF40-205ENST00000555052 EYA3Q99504 573 aa20.25■□□□□ 0.83
ARHGEF40-205ENST00000555052 CWC25Q9NXE8 425 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF40-205ENST00000555052 ECE2O60344 883 aa20.24■□□□□ 0.83
ARHGEF40-205ENST00000555052 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
ARHGEF40-205ENST00000555052 CHMP4AQ9BY43 222 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms