RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 ISCA1Q9BUE6 129 aa26.6■■□□□ 1.85
NEMP1-204ENST00000554340 MBIPQ9NS73 344 aa26.6■■□□□ 1.85
NEMP1-204ENST00000554340 HYPKQ9NX55 129 aa26.6■■□□□ 1.85
NEMP1-204ENST00000554340 TRPM7Q96QT4 1865 aa26.6■■□□□ 1.85
NEMP1-204ENST00000554340 ZNRF3Q9ULT6 936 aa26.59■■□□□ 1.85
NEMP1-204ENST00000554340 DUOX1Q9NRD9 1551 aa26.59■■□□□ 1.85
NEMP1-204ENST00000554340 ZNF853P0CG23 659 aa26.58■■□□□ 1.85
NEMP1-204ENST00000554340 CALD1Q05682 793 aaKnown RBP26.58■■□□□ 1.85
NEMP1-204ENST00000554340 USP50Q70EL3 339 aaPredicted RBP26.58■■□□□ 1.85
NEMP1-204ENST00000554340 TMC4Q7Z404 712 aa26.58■■□□□ 1.85
NEMP1-204ENST00000554340 VEGFBP49765 207 aa26.58■■□□□ 1.84
NEMP1-204ENST00000554340 CXCL9Q07325 125 aa26.57■■□□□ 1.84
NEMP1-204ENST00000554340 KIAA2012Q0VF49 1180 aa26.57■■□□□ 1.84
NEMP1-204ENST00000554340 ZNF428Q96B54 188 aa26.57■■□□□ 1.84
NEMP1-204ENST00000554340 RASSF10A6NK89 507 aa26.56■■□□□ 1.84
NEMP1-204ENST00000554340 ATP5J2-PTCD1G3V325 749 aa26.56■■□□□ 1.84
NEMP1-204ENST00000554340 APAF1O14727 1248 aa26.56■■□□□ 1.84
NEMP1-204ENST00000554340 IFT57Q9NWB7 429 aa26.56■■□□□ 1.84
NEMP1-204ENST00000554340 GPRC5DQ9NZD1 345 aa26.56■■□□□ 1.84
NEMP1-204ENST00000554340 FAM89AQ96GI7 184 aa26.55■■□□□ 1.84
NEMP1-204ENST00000554340 TRIM28Q13263 835 aaKnown RBP26.54■■□□□ 1.84
NEMP1-204ENST00000554340 SF3B3Q15393 1217 aaKnown RBP26.54■■□□□ 1.84
NEMP1-204ENST00000554340 ADARB2Q9NS39 739 aaKnown RBP26.54■■□□□ 1.84
NEMP1-204ENST00000554340 GNAI1P63096 354 aa26.53■■□□□ 1.84
NEMP1-204ENST00000554340 CDHR2Q9BYE9 1310 aa26.53■■□□□ 1.84
NEMP1-204ENST00000554340 DEFB115Q30KQ5 88 aa26.52■■□□□ 1.84
NEMP1-204ENST00000554340 CIAPIN1Q6FI81 312 aa26.52■■□□□ 1.84
NEMP1-204ENST00000554340 COL4A1P02462 1669 aa26.52■■□□□ 1.84
NEMP1-204ENST00000554340 FOXN1O15353 648 aa26.51■■□□□ 1.83
NEMP1-204ENST00000554340 GMPSP49915 693 aaPredicted RBP26.51■■□□□ 1.83
NEMP1-204ENST00000554340 ABT1Q9ULW3 272 aaKnown RBP26.51■■□□□ 1.83
NEMP1-204ENST00000554340 GOLGA2Q08379 1002 aa26.5■■□□□ 1.83
NEMP1-204ENST00000554340 TNIP1Q15025 636 aa26.5■■□□□ 1.83
NEMP1-204ENST00000554340 CELF1Q92879 486 aaKnown RBP26.5■■□□□ 1.83
NEMP1-204ENST00000554340 AIDAQ96BJ3 306 aa26.5■■□□□ 1.83
NEMP1-204ENST00000554340 THSD7BQ9C0I4 1608 aa26.5■■□□□ 1.83
NEMP1-204ENST00000554340 IRS4O14654 1257 aaPredicted RBP26.49■■□□□ 1.83
NEMP1-204ENST00000554340 RAD17O75943 681 aa26.49■■□□□ 1.83
NEMP1-204ENST00000554340 RIC3Q7Z5B4 369 aa26.49■■□□□ 1.83
NEMP1-204ENST00000554340 FMR1Q06787 632 aaKnown RBP eCLIP26.48■■□□□ 1.83
NEMP1-204ENST00000554340 RTL5Q5HYW3 569 aaPredicted RBP26.48■■□□□ 1.83
NEMP1-204ENST00000554340 CHMP4AQ9BY43 222 aa26.48■■□□□ 1.83
NEMP1-204ENST00000554340 CAPN15O75808 1086 aa26.47■■□□□ 1.83
NEMP1-204ENST00000554340 BCL2L13Q9BXK5 485 aa26.47■■□□□ 1.83
NEMP1-204ENST00000554340 PHAXQ9H814 394 aaKnown RBP26.47■■□□□ 1.83
NEMP1-204ENST00000554340 WBP1LQ9NX94 342 aa26.47■■□□□ 1.83
NEMP1-204ENST00000554340 WDR33Q9C0J8 1336 aaKnown RBP26.47■■□□□ 1.83
NEMP1-204ENST00000554340 YDJCA8MPS7 323 aa26.46■■□□□ 1.83
NEMP1-204ENST00000554340 TRAF5O00463 557 aa26.46■■□□□ 1.83
NEMP1-204ENST00000554340 ELL2O00472 640 aaPredicted RBP26.46■■□□□ 1.83
NEMP1-204ENST00000554340 NSFL1CQ9UNZ2 370 aaKnown RBP26.46■■□□□ 1.83
NEMP1-204ENST00000554340 CTCFP49711 727 aaPredicted RBP26.46■■□□□ 1.83
NEMP1-204ENST00000554340 WASHC4Q2M389 1173 aa26.46■■□□□ 1.83
NEMP1-204ENST00000554340 ZBTB38Q8NAP3 1195 aaPredicted RBP26.46■■□□□ 1.83
NEMP1-204ENST00000554340 PRDM10Q9NQV6 1147 aa26.46■■□□□ 1.83
NEMP1-204ENST00000554340 ZNF316A6NFI3 1004 aaPredicted RBP26.45■■□□□ 1.82
NEMP1-204ENST00000554340 CST9Q5W186 159 aa26.45■■□□□ 1.82
NEMP1-204ENST00000554340 C8orf58Q8NAV2 365 aa26.45■■□□□ 1.82
NEMP1-204ENST00000554340 PGAP2Q9UHJ9 254 aa26.45■■□□□ 1.82
NEMP1-204ENST00000554340 HSP90B1P14625 803 aaKnown RBP26.44■■□□□ 1.82
NEMP1-204ENST00000554340 GPSM2P81274 684 aa26.44■■□□□ 1.82
NEMP1-204ENST00000554340 RPS8P62241 208 aaKnown RBP26.43■■□□□ 1.82
NEMP1-204ENST00000554340 CCDC191Q8NCU4 936 aa26.43■■□□□ 1.82
NEMP1-204ENST00000554340 ZC3H15Q8WU90 426 aaKnown RBP26.43■■□□□ 1.82
NEMP1-204ENST00000554340 MYD88Q99836 296 aa26.43■■□□□ 1.82
NEMP1-204ENST00000554340 C6orf229H3BNL8 230 aa26.42■■□□□ 1.82
NEMP1-204ENST00000554340 ANP32CO43423 234 aa26.42■■□□□ 1.82
NEMP1-204ENST00000554340 POLLQ9UGP5 575 aa26.42■■□□□ 1.82
NEMP1-204ENST00000554340 CNOT7Q9UIV1 285 aaKnown RBP26.42■■□□□ 1.82
NEMP1-204ENST00000554340 TLL2Q9Y6L7 1015 aa26.42■■□□□ 1.82
NEMP1-204ENST00000554340 HIRAP54198 1017 aaPredicted RBP26.41■■□□□ 1.82
NEMP1-204ENST00000554340 MAP2K1Q02750 393 aaPredicted RBP26.41■■□□□ 1.82
NEMP1-204ENST00000554340 CCDC30Q5VVM6 783 aa26.41■■□□□ 1.82
NEMP1-204ENST00000554340 EYA3Q99504 573 aa26.41■■□□□ 1.82
NEMP1-204ENST00000554340 DBNDD1Q9H9R9 158 aa26.41■■□□□ 1.82
NEMP1-204ENST00000554340 DDX58O95786 925 aaKnown RBP26.4■■□□□ 1.82
NEMP1-204ENST00000554340 PCCAP05165 728 aaPredicted RBP26.4■■□□□ 1.82
NEMP1-204ENST00000554340 ECE1P42892 770 aa26.4■■□□□ 1.82
NEMP1-204ENST00000554340 TRPM4Q8TD43 1214 aa26.4■■□□□ 1.82
NEMP1-204ENST00000554340 CAPNS2Q96L46 248 aa26.4■■□□□ 1.82
NEMP1-204ENST00000554340 GLIS2Q9BZE0 524 aaPredicted RBP26.4■■□□□ 1.82
NEMP1-204ENST00000554340 CWC25Q9NXE8 425 aaPredicted RBP26.4■■□□□ 1.82
NEMP1-204ENST00000554340 SCN9AQ15858 1988 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 MYH3P11055 1940 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 H7C1D1 291 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 PSMD14O00487 310 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 RIMBP2O15034 1052 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 PAXIP1Q6ZW49 1069 aaPredicted RBP26.39■■□□□ 1.82
NEMP1-204ENST00000554340 MICALL2Q8IY33 904 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 TBC1D16Q8TBP0 767 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 DPF2Q92785 391 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 METTL22Q9BUU2 404 aaPredicted RBP26.39■■□□□ 1.82
NEMP1-204ENST00000554340 SEC31BQ9NQW1 1179 aa26.39■■□□□ 1.82
NEMP1-204ENST00000554340 SHTN1A0MZ66 631 aa26.38■■□□□ 1.81
NEMP1-204ENST00000554340 ZBTB12Q9Y330 459 aaPredicted RBP26.38■■□□□ 1.81
NEMP1-204ENST00000554340 CELF2O95319 508 aaKnown RBP26.37■■□□□ 1.81
NEMP1-204ENST00000554340 LBX1P52954 281 aa26.37■■□□□ 1.81
NEMP1-204ENST00000554340 CCDC152Q4G0S7 254 aa26.37■■□□□ 1.81
NEMP1-204ENST00000554340 CYP4F22Q6NT55 531 aa26.37■■□□□ 1.81
NEMP1-204ENST00000554340 PODXL2Q9NZ53 605 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms