RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CHMP4AQ9BY43 222 aa24.3■■□□□ 1.48
CPSF2-203ENST00000554290 SCNN1DP51172 638 aa24.29■■□□□ 1.48
CPSF2-203ENST00000554290 GOLGA2Q08379 1002 aa24.29■■□□□ 1.48
CPSF2-203ENST00000554290 TRIM28Q13263 835 aaKnown RBP24.29■■□□□ 1.48
CPSF2-203ENST00000554290 COL13A1Q5TAT6 717 aaPredicted RBP24.29■■□□□ 1.48
CPSF2-203ENST00000554290 RIC3Q7Z5B4 369 aa24.29■■□□□ 1.48
CPSF2-203ENST00000554290 ELL2O00472 640 aaPredicted RBP24.28■■□□□ 1.48
CPSF2-203ENST00000554290 EPS15P42566 896 aa24.28■■□□□ 1.48
CPSF2-203ENST00000554290 USP50Q70EL3 339 aaPredicted RBP24.28■■□□□ 1.48
CPSF2-203ENST00000554290 CNTNAP1P78357 1384 aa24.28■■□□□ 1.48
CPSF2-203ENST00000554290 ADAMTSL1Q8N6G6 1762 aa24.27■■□□□ 1.48
CPSF2-203ENST00000554290 KIAA2012Q0VF49 1180 aa24.27■■□□□ 1.48
CPSF2-203ENST00000554290 SF3B3Q15393 1217 aaKnown RBP24.27■■□□□ 1.48
CPSF2-203ENST00000554290 CXCL9Q07325 125 aa24.26■■□□□ 1.47
CPSF2-203ENST00000554290 LAMB2P55268 1798 aa24.26■■□□□ 1.47
CPSF2-203ENST00000554290 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
CPSF2-203ENST00000554290 RTL5Q5HYW3 569 aaPredicted RBP24.25■■□□□ 1.47
CPSF2-203ENST00000554290 IRS4O14654 1257 aaPredicted RBP24.24■■□□□ 1.47
CPSF2-203ENST00000554290 TNIP1Q15025 636 aa24.24■■□□□ 1.47
CPSF2-203ENST00000554290 CIAPIN1Q6FI81 312 aa24.24■■□□□ 1.47
CPSF2-203ENST00000554290 PHAXQ9H814 394 aaKnown RBP24.24■■□□□ 1.47
CPSF2-203ENST00000554290 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
CPSF2-203ENST00000554290 GPRC5DQ9NZD1 345 aa24.24■■□□□ 1.47
CPSF2-203ENST00000554290 CCDC30Q5VVM6 783 aa24.23■■□□□ 1.47
CPSF2-203ENST00000554290 C8orf58Q8NAV2 365 aa24.23■■□□□ 1.47
CPSF2-203ENST00000554290 ZBTB38Q8NAP3 1195 aaPredicted RBP24.22■■□□□ 1.47
CPSF2-203ENST00000554290 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
CPSF2-203ENST00000554290 VEGFBP49765 207 aa24.21■■□□□ 1.47
CPSF2-203ENST00000554290 GMPSP49915 693 aaPredicted RBP24.21■■□□□ 1.47
CPSF2-203ENST00000554290 CELF1Q92879 486 aaKnown RBP24.21■■□□□ 1.47
CPSF2-203ENST00000554290 MYD88Q99836 296 aa24.21■■□□□ 1.47
CPSF2-203ENST00000554290 NSFL1CQ9UNZ2 370 aaKnown RBP24.21■■□□□ 1.47
CPSF2-203ENST00000554290 CDHR2Q9BYE9 1310 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 RAD17O75943 681 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 WASHC4Q2M389 1173 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 DEFB115Q30KQ5 88 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 TNS4Q8IZW8 715 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 CCDC191Q8NCU4 936 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 BCL2L13Q9BXK5 485 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 LTBP1Q14766 1721 aa24.2■■□□□ 1.46
CPSF2-203ENST00000554290 DDX60Q8IY21 1712 aaKnown RBP24.19■■□□□ 1.46
CPSF2-203ENST00000554290 RASSF10A6NK89 507 aa24.19■■□□□ 1.46
CPSF2-203ENST00000554290 RPS8P62241 208 aaKnown RBP24.19■■□□□ 1.46
CPSF2-203ENST00000554290 ABT1Q9ULW3 272 aaKnown RBP24.19■■□□□ 1.46
CPSF2-203ENST00000554290 C6orf229H3BNL8 230 aa24.18■■□□□ 1.46
CPSF2-203ENST00000554290 PCCAP05165 728 aaPredicted RBP24.17■■□□□ 1.46
CPSF2-203ENST00000554290 CCDC27Q2M243 656 aa24.17■■□□□ 1.46
CPSF2-203ENST00000554290 CCDC184Q52MB2 194 aa24.17■■□□□ 1.46
CPSF2-203ENST00000554290 METTL22Q9BUU2 404 aaPredicted RBP24.17■■□□□ 1.46
CPSF2-203ENST00000554290 CWC25Q9NXE8 425 aaPredicted RBP24.17■■□□□ 1.46
CPSF2-203ENST00000554290 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
CPSF2-203ENST00000554290 GPSM2P81274 684 aa24.16■■□□□ 1.46
CPSF2-203ENST00000554290 EYA3Q99504 573 aa24.16■■□□□ 1.46
CPSF2-203ENST00000554290 YDJCA8MPS7 323 aa24.15■■□□□ 1.46
CPSF2-203ENST00000554290 CCDC152Q4G0S7 254 aa24.15■■□□□ 1.46
CPSF2-203ENST00000554290 TSPYL6Q8N831 410 aa24.15■■□□□ 1.46
CPSF2-203ENST00000554290 AIDAQ96BJ3 306 aa24.15■■□□□ 1.46
CPSF2-203ENST00000554290 STK31Q9BXU1 1019 aa24.15■■□□□ 1.46
CPSF2-203ENST00000554290 LRRC37AA6NMS7 1700 aa24.15■■□□□ 1.46
CPSF2-203ENST00000554290 TAF1P21675 1872 aa24.15■■□□□ 1.46
CPSF2-203ENST00000554290 RIMBP2O15034 1052 aa24.14■■□□□ 1.45
CPSF2-203ENST00000554290 PDE8AO60658 829 aa24.14■■□□□ 1.45
CPSF2-203ENST00000554290 ZC3H15Q8WU90 426 aaKnown RBP24.14■■□□□ 1.45
CPSF2-203ENST00000554290 TSR2Q969E8 191 aaKnown RBP24.14■■□□□ 1.45
CPSF2-203ENST00000554290 DUOX1Q9NRD9 1551 aa24.14■■□□□ 1.45
CPSF2-203ENST00000554290 POLLQ9UGP5 575 aa24.14■■□□□ 1.45
CPSF2-203ENST00000554290 CNOT7Q9UIV1 285 aaKnown RBP24.14■■□□□ 1.45
CPSF2-203ENST00000554290 PCNTO95613 3336 aa24.14■■□□□ 1.45
CPSF2-203ENST00000554290 H7C1D1 291 aa24.13■■□□□ 1.45
CPSF2-203ENST00000554290 TRAF5O00463 557 aa24.13■■□□□ 1.45
CPSF2-203ENST00000554290 KSR2Q6VAB6 950 aa24.13■■□□□ 1.45
CPSF2-203ENST00000554290 WWC1Q8IX03 1113 aa24.13■■□□□ 1.45
CPSF2-203ENST00000554290 MAP3K2Q9Y2U5 619 aa24.13■■□□□ 1.45
CPSF2-203ENST00000554290 FOXN1O15353 648 aa24.12■■□□□ 1.45
CPSF2-203ENST00000554290 FMR1Q06787 632 aaKnown RBP eCLIP24.12■■□□□ 1.45
CPSF2-203ENST00000554290 TBC1D16Q8TBP0 767 aa24.12■■□□□ 1.45
CPSF2-203ENST00000554290 ZC3H12CQ9C0D7 883 aaKnown RBP24.12■■□□□ 1.45
CPSF2-203ENST00000554290 DBNDD1Q9H9R9 158 aa24.12■■□□□ 1.45
CPSF2-203ENST00000554290 SEC31BQ9NQW1 1179 aa24.12■■□□□ 1.45
CPSF2-203ENST00000554290 PGAP2Q9UHJ9 254 aa24.12■■□□□ 1.45
CPSF2-203ENST00000554290 WDR33Q9C0J8 1336 aaKnown RBP24.11■■□□□ 1.45
CPSF2-203ENST00000554290 PI4KAP2A4QPH2 592 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 NEXNQ0ZGT2 675 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 NCBP3Q53F19 620 aaKnown RBP24.11■■□□□ 1.45
CPSF2-203ENST00000554290 CST9Q5W186 159 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 PI4KAP1Q8N8J0 262 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 DPF2Q92785 391 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 WBP1LQ9NX94 342 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 PODXL2Q9NZ53 605 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 ANKIB1Q9P2G1 1089 aa24.11■■□□□ 1.45
CPSF2-203ENST00000554290 IL16Q14005 1332 aa24.1■■□□□ 1.45
CPSF2-203ENST00000554290 PSMD14O00487 310 aa24.1■■□□□ 1.45
CPSF2-203ENST00000554290 ECE1P42892 770 aa24.1■■□□□ 1.45
CPSF2-203ENST00000554290 CTCFP49711 727 aaPredicted RBP24.1■■□□□ 1.45
CPSF2-203ENST00000554290 TWISTNBQ3B726 338 aaPredicted RBP24.1■■□□□ 1.45
CPSF2-203ENST00000554290 JARID2Q92833 1246 aaPredicted RBP24.1■■□□□ 1.45
CPSF2-203ENST00000554290 MRS2Q9HD23 443 aa24.1■■□□□ 1.45
CPSF2-203ENST00000554290 G3V3G9 751 aa24.09■■□□□ 1.45
CPSF2-203ENST00000554290 ANP32CO43423 234 aa24.09■■□□□ 1.45
CPSF2-203ENST00000554290 ECE2O60344 883 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms