RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 TMEM88BA6NKF7 163 aa13.84□□□□□ -0.19
PNN-203ENST00000554117 G3V3G9 751 aa13.84□□□□□ -0.19
PNN-203ENST00000554117 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
PNN-203ENST00000554117 TNIP1Q15025 636 aa13.84□□□□□ -0.19
PNN-203ENST00000554117 DCAF8Q5TAQ9 597 aa13.84□□□□□ -0.19
PNN-203ENST00000554117 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
PNN-203ENST00000554117 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
PNN-203ENST00000554117 AOC3Q16853 763 aa13.83□□□□□ -0.2
PNN-203ENST00000554117 USP50Q70EL3 339 aaPredicted RBP13.83□□□□□ -0.2
PNN-203ENST00000554117 EYA3Q99504 573 aa13.83□□□□□ -0.2
PNN-203ENST00000554117 ZNRF3Q9ULT6 936 aa13.83□□□□□ -0.2
PNN-203ENST00000554117 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
PNN-203ENST00000554117 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
PNN-203ENST00000554117 ELL2O00472 640 aaPredicted RBP13.82□□□□□ -0.2
PNN-203ENST00000554117 AIDAQ96BJ3 306 aa13.82□□□□□ -0.2
PNN-203ENST00000554117 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
PNN-203ENST00000554117 CDHR2Q9BYE9 1310 aa13.82□□□□□ -0.2
PNN-203ENST00000554117 IRS4O14654 1257 aaPredicted RBP13.81□□□□□ -0.2
PNN-203ENST00000554117 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
PNN-203ENST00000554117 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
PNN-203ENST00000554117 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
PNN-203ENST00000554117 CIAPIN1Q6FI81 312 aa13.81□□□□□ -0.2
PNN-203ENST00000554117 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
PNN-203ENST00000554117 MYD88Q99836 296 aa13.81□□□□□ -0.2
PNN-203ENST00000554117 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
PNN-203ENST00000554117 MRS2Q9HD23 443 aa13.81□□□□□ -0.2
PNN-203ENST00000554117 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
PNN-203ENST00000554117 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
PNN-203ENST00000554117 NSFL1CQ9UNZ2 370 aaKnown RBP13.81□□□□□ -0.2
PNN-203ENST00000554117 C6orf229H3BNL8 230 aa13.8□□□□□ -0.2
PNN-203ENST00000554117 ZNF853P0CG23 659 aa13.8□□□□□ -0.2
PNN-203ENST00000554117 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
PNN-203ENST00000554117 WASHC4Q2M389 1173 aa13.8□□□□□ -0.2
PNN-203ENST00000554117 CCDC152Q4G0S7 254 aa13.8□□□□□ -0.2
PNN-203ENST00000554117 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
PNN-203ENST00000554117 ZBTB38Q8NAP3 1195 aaPredicted RBP13.8□□□□□ -0.2
PNN-203ENST00000554117 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
PNN-203ENST00000554117 RTFDC1Q9BY42 306 aaPredicted RBP13.8□□□□□ -0.2
PNN-203ENST00000554117 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
PNN-203ENST00000554117 ABT1Q9ULW3 272 aaKnown RBP13.8□□□□□ -0.2
PNN-203ENST00000554117 ECM29Q5VYK3 1845 aa13.8□□□□□ -0.2
PNN-203ENST00000554117 COL4A5P29400 1685 aa13.79□□□□□ -0.2
PNN-203ENST00000554117 H7C1D1 291 aa13.79□□□□□ -0.2
PNN-203ENST00000554117 HSPA1AP0DMV8 641 aaKnown RBP13.79□□□□□ -0.2
PNN-203ENST00000554117 HSPA1BP0DMV9 641 aaKnown RBP13.79□□□□□ -0.2
PNN-203ENST00000554117 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
PNN-203ENST00000554117 SF3B3Q15393 1217 aaKnown RBP13.79□□□□□ -0.2
PNN-203ENST00000554117 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
PNN-203ENST00000554117 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
PNN-203ENST00000554117 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
PNN-203ENST00000554117 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
PNN-203ENST00000554117 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
PNN-203ENST00000554117 PDE8AO60658 829 aa13.78□□□□□ -0.2
PNN-203ENST00000554117 DEFB115Q30KQ5 88 aa13.78□□□□□ -0.2
PNN-203ENST00000554117 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
PNN-203ENST00000554117 PHAXQ9H814 394 aaKnown RBP13.78□□□□□ -0.2
PNN-203ENST00000554117 GPRC5DQ9NZD1 345 aa13.78□□□□□ -0.2
PNN-203ENST00000554117 ANKIB1Q9P2G1 1089 aa13.78□□□□□ -0.2
PNN-203ENST00000554117 CNTNAP1P78357 1384 aa13.78□□□□□ -0.2
PNN-203ENST00000554117 SCN9AQ15858 1988 aa13.78□□□□□ -0.2
PNN-203ENST00000554117 A0A1B0GUL6 1792 aa13.77□□□□□ -0.21
PNN-203ENST00000554117 ECE1P42892 770 aa13.77□□□□□ -0.21
PNN-203ENST00000554117 SCNN1DP51172 638 aa13.77□□□□□ -0.21
PNN-203ENST00000554117 RPS8P62241 208 aaKnown RBP13.77□□□□□ -0.21
PNN-203ENST00000554117 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
PNN-203ENST00000554117 BEGAINQ9BUH8 593 aa13.77□□□□□ -0.21
PNN-203ENST00000554117 METTL22Q9BUU2 404 aaPredicted RBP13.77□□□□□ -0.21
PNN-203ENST00000554117 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
PNN-203ENST00000554117 MYH13Q9UKX3 1938 aa13.77□□□□□ -0.21
PNN-203ENST00000554117 DUOX1Q9NRD9 1551 aa13.76□□□□□ -0.21
PNN-203ENST00000554117 IL16Q14005 1332 aa13.76□□□□□ -0.21
PNN-203ENST00000554117 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
PNN-203ENST00000554117 PCCAP05165 728 aaPredicted RBP13.76□□□□□ -0.21
PNN-203ENST00000554117 EPS15P42566 896 aa13.76□□□□□ -0.21
PNN-203ENST00000554117 CXCL9Q07325 125 aa13.76□□□□□ -0.21
PNN-203ENST00000554117 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
PNN-203ENST00000554117 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
PNN-203ENST00000554117 CDC5LQ99459 802 aaKnown RBP13.76□□□□□ -0.21
PNN-203ENST00000554117 MAP3K2Q9Y2U5 619 aa13.76□□□□□ -0.21
PNN-203ENST00000554117 RIMBP2O15034 1052 aa13.75□□□□□ -0.21
PNN-203ENST00000554117 RAD17O75943 681 aa13.75□□□□□ -0.21
PNN-203ENST00000554117 GMPSP49915 693 aaPredicted RBP13.75□□□□□ -0.21
PNN-203ENST00000554117 KSR2Q6VAB6 950 aa13.75□□□□□ -0.21
PNN-203ENST00000554117 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
PNN-203ENST00000554117 C8orf58Q8NAV2 365 aa13.75□□□□□ -0.21
PNN-203ENST00000554117 CELF1Q92879 486 aaKnown RBP13.75□□□□□ -0.21
PNN-203ENST00000554117 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
PNN-203ENST00000554117 MAP2K1Q02750 393 aaPredicted RBP13.74□□□□□ -0.21
PNN-203ENST00000554117 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
PNN-203ENST00000554117 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
PNN-203ENST00000554117 GGA1Q9UJY5 639 aa13.74□□□□□ -0.21
PNN-203ENST00000554117 THSD7BQ9C0I4 1608 aa13.73□□□□□ -0.21
PNN-203ENST00000554117 PI4KAP2A4QPH2 592 aa13.73□□□□□ -0.21
PNN-203ENST00000554117 ECE2O60344 883 aa13.73□□□□□ -0.21
PNN-203ENST00000554117 UFL1O94874 794 aa13.73□□□□□ -0.21
PNN-203ENST00000554117 RPS12P25398 132 aaKnown RBP13.73□□□□□ -0.21
PNN-203ENST00000554117 PI4KAP1Q8N8J0 262 aa13.73□□□□□ -0.21
PNN-203ENST00000554117 ZC3H15Q8WU90 426 aaKnown RBP13.73□□□□□ -0.21
PNN-203ENST00000554117 DBNDD1Q9H9R9 158 aa13.73□□□□□ -0.21
PNN-203ENST00000554117 CNOT7Q9UIV1 285 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms