RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
XRCC3-204ENST00000553361 HSPA1AP0DMV8 641 aaKnown RBP21.4■■□□□ 1.02
XRCC3-204ENST00000553361 HSPA1BP0DMV9 641 aaKnown RBP21.4■■□□□ 1.02
XRCC3-204ENST00000553361 SCNN1DP51172 638 aa21.4■■□□□ 1.02
XRCC3-204ENST00000553361 GOLGA2Q08379 1002 aa21.4■■□□□ 1.02
XRCC3-204ENST00000553361 COL13A1Q5TAT6 717 aaPredicted RBP21.4■■□□□ 1.02
XRCC3-204ENST00000553361 ZNRF3Q9ULT6 936 aa21.4■■□□□ 1.02
XRCC3-204ENST00000553361 TMEM88BA6NKF7 163 aa21.39■■□□□ 1.01
XRCC3-204ENST00000553361 IRS4O14654 1257 aaPredicted RBP21.38■■□□□ 1.01
XRCC3-204ENST00000553361 CXCL9Q07325 125 aa21.38■■□□□ 1.01
XRCC3-204ENST00000553361 TRIM28Q13263 835 aaKnown RBP21.38■■□□□ 1.01
XRCC3-204ENST00000553361 SCN4AP35499 1836 aa21.37■■□□□ 1.01
XRCC3-204ENST00000553361 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
XRCC3-204ENST00000553361 CELF1Q92879 486 aaKnown RBP21.37■■□□□ 1.01
XRCC3-204ENST00000553361 RAD17O75943 681 aa21.36■■□□□ 1.01
XRCC3-204ENST00000553361 KIAA2012Q0VF49 1180 aa21.36■■□□□ 1.01
XRCC3-204ENST00000553361 TMC4Q7Z404 712 aa21.36■■□□□ 1.01
XRCC3-204ENST00000553361 MYD88Q99836 296 aa21.36■■□□□ 1.01
XRCC3-204ENST00000553361 CCDC30Q5VVM6 783 aa21.35■■□□□ 1.01
XRCC3-204ENST00000553361 USP50Q70EL3 339 aaPredicted RBP21.35■■□□□ 1.01
XRCC3-204ENST00000553361 TSPYL6Q8N831 410 aa21.35■■□□□ 1.01
XRCC3-204ENST00000553361 NSFL1CQ9UNZ2 370 aaKnown RBP21.35■■□□□ 1.01
XRCC3-204ENST00000553361 CNTNAP1P78357 1384 aa21.35■■□□□ 1.01
XRCC3-204ENST00000553361 GMPSP49915 693 aaPredicted RBP21.34■■□□□ 1.01
XRCC3-204ENST00000553361 CIAPIN1Q6FI81 312 aa21.34■■□□□ 1.01
XRCC3-204ENST00000553361 ZBTB38Q8NAP3 1195 aaPredicted RBP21.34■■□□□ 1.01
XRCC3-204ENST00000553361 JARID2Q92833 1246 aaPredicted RBP21.34■■□□□ 1.01
XRCC3-204ENST00000553361 GPRC5DQ9NZD1 345 aa21.34■■□□□ 1.01
XRCC3-204ENST00000553361 VEGFBP49765 207 aa21.33■■□□□ 1.01
XRCC3-204ENST00000553361 FMR1Q06787 632 aaKnown RBP eCLIP21.33■■□□□ 1.01
XRCC3-204ENST00000553361 TSR2Q969E8 191 aaKnown RBP21.33■■□□□ 1.01
XRCC3-204ENST00000553361 BCL2L13Q9BXK5 485 aa21.33■■□□□ 1.01
XRCC3-204ENST00000553361 CHMP4AQ9BY43 222 aa21.33■■□□□ 1.01
XRCC3-204ENST00000553361 ADARB2Q9NS39 739 aaKnown RBP21.33■■□□□ 1.01
XRCC3-204ENST00000553361 C6orf229H3BNL8 230 aa21.32■■□□□ 1
XRCC3-204ENST00000553361 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
XRCC3-204ENST00000553361 RPS8P62241 208 aaKnown RBP21.32■■□□□ 1
XRCC3-204ENST00000553361 TNIP1Q15025 636 aa21.32■■□□□ 1
XRCC3-204ENST00000553361 RIMBP2O15034 1052 aa21.31■■□□□ 1
XRCC3-204ENST00000553361 GPSM2P81274 684 aa21.31■■□□□ 1
XRCC3-204ENST00000553361 WASHC4Q2M389 1173 aa21.31■■□□□ 1
XRCC3-204ENST00000553361 CCDC191Q8NCU4 936 aa21.31■■□□□ 1
XRCC3-204ENST00000553361 METTL22Q9BUU2 404 aaPredicted RBP21.31■■□□□ 1
XRCC3-204ENST00000553361 CWC25Q9NXE8 425 aaPredicted RBP21.31■■□□□ 1
XRCC3-204ENST00000553361 ABT1Q9ULW3 272 aaKnown RBP21.31■■□□□ 1
XRCC3-204ENST00000553361 YDJCA8MPS7 323 aa21.3■■□□□ 1
XRCC3-204ENST00000553361 HSP90B1P14625 803 aaKnown RBP21.3■■□□□ 1
XRCC3-204ENST00000553361 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
XRCC3-204ENST00000553361 DEFB115Q30KQ5 88 aa21.3■■□□□ 1
XRCC3-204ENST00000553361 WWC1Q8IX03 1113 aa21.3■■□□□ 1
XRCC3-204ENST00000553361 TNS4Q8IZW8 715 aa21.3■■□□□ 1
XRCC3-204ENST00000553361 CCDC85AQ96PX6 553 aaPredicted RBP21.3■■□□□ 1
XRCC3-204ENST00000553361 SEC31BQ9NQW1 1179 aa21.3■■□□□ 1
XRCC3-204ENST00000553361 POLLQ9UGP5 575 aa21.3■■□□□ 1
XRCC3-204ENST00000553361 ANKRD36CQ5JPF3 1778 aa21.3■■□□□ 1
XRCC3-204ENST00000553361 TRAF5O00463 557 aa21.29■■□□□ 1
XRCC3-204ENST00000553361 DBNDD1Q9H9R9 158 aa21.29■■□□□ 1
XRCC3-204ENST00000553361 MRS2Q9HD23 443 aa21.29■■□□□ 1
XRCC3-204ENST00000553361 MAP3K2Q9Y2U5 619 aa21.29■■□□□ 1
XRCC3-204ENST00000553361 PCCAP05165 728 aaPredicted RBP21.28■■□□□ 1
XRCC3-204ENST00000553361 CCDC27Q2M243 656 aa21.28■■□□□ 1
XRCC3-204ENST00000553361 GPR101Q96P66 508 aaPredicted RBP21.28■■□□□ 1
XRCC3-204ENST00000553361 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
XRCC3-204ENST00000553361 LTBP1Q14766 1721 aa21.28■■□□□ 1
XRCC3-204ENST00000553361 RASSF10A6NK89 507 aa21.27■■□□□ 1
XRCC3-204ENST00000553361 DOK7Q18PE1 504 aa21.27■■□□□ 1
XRCC3-204ENST00000553361 CCDC152Q4G0S7 254 aa21.27■■□□□ 1
XRCC3-204ENST00000553361 STK31Q9BXU1 1019 aa21.27■■□□□ 1
XRCC3-204ENST00000553361 CNOT7Q9UIV1 285 aaKnown RBP21.27■■□□□ 1
XRCC3-204ENST00000553361 ZBTB12Q9Y330 459 aaPredicted RBP21.27■■□□□ 1
XRCC3-204ENST00000553361 ADAMTSL1Q8N6G6 1762 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 SHTN1A0MZ66 631 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 PI4KAP2A4QPH2 592 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 ANP32CO43423 234 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 PDE8AO60658 829 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
XRCC3-204ENST00000553361 KSR2Q6VAB6 950 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 PI4KAP1Q8N8J0 262 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 TBC1D16Q8TBP0 767 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 EYA3Q99504 573 aa21.26■□□□□ 0.99
XRCC3-204ENST00000553361 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
XRCC3-204ENST00000553361 H7C1D1 291 aa21.25■□□□□ 0.99
XRCC3-204ENST00000553361 PSMD14O00487 310 aa21.25■□□□□ 0.99
XRCC3-204ENST00000553361 HIRAP54198 1017 aaPredicted RBP21.25■□□□□ 0.99
XRCC3-204ENST00000553361 CST9Q5W186 159 aa21.25■□□□□ 0.99
XRCC3-204ENST00000553361 PAXIP1Q6ZW49 1069 aaPredicted RBP21.25■□□□□ 0.99
XRCC3-204ENST00000553361 KCNQ5Q9NR82 932 aa21.25■□□□□ 0.99
XRCC3-204ENST00000553361 ANKIB1Q9P2G1 1089 aa21.25■□□□□ 0.99
XRCC3-204ENST00000553361 LAMB2P55268 1798 aa21.25■□□□□ 0.99
XRCC3-204ENST00000553361 FOXN1O15353 648 aa21.24■□□□□ 0.99
XRCC3-204ENST00000553361 CAPN15O75808 1086 aa21.24■□□□□ 0.99
XRCC3-204ENST00000553361 SLC4A2P04920 1241 aa21.24■□□□□ 0.99
XRCC3-204ENST00000553361 IGKV5-2P06315 115 aa21.24■□□□□ 0.99
XRCC3-204ENST00000553361 G2E3Q7L622 706 aa21.24■□□□□ 0.99
XRCC3-204ENST00000553361 TRPM4Q8TD43 1214 aa21.24■□□□□ 0.99
XRCC3-204ENST00000553361 AIDAQ96BJ3 306 aa21.24■□□□□ 0.99
XRCC3-204ENST00000553361 GLIS2Q9BZE0 524 aaPredicted RBP21.24■□□□□ 0.99
XRCC3-204ENST00000553361 ZC3H12CQ9C0D7 883 aaKnown RBP21.24■□□□□ 0.99
XRCC3-204ENST00000553361 ECE2O60344 883 aa21.23■□□□□ 0.99
XRCC3-204ENST00000553361 NEXNQ0ZGT2 675 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms