RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MYD88Q99836 296 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
TMEM116-216ENST00000552800 RBM25P49756 843 aaKnown RBP12.12□□□□□ -0.47
TMEM116-216ENST00000552800 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
TMEM116-216ENST00000552800 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
TMEM116-216ENST00000552800 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
TMEM116-216ENST00000552800 AK7Q96M32 723 aa12.12□□□□□ -0.47
TMEM116-216ENST00000552800 TBC1D32Q96NH3 1257 aa12.12□□□□□ -0.47
TMEM116-216ENST00000552800 C8orf37Q96NL8 207 aa12.12□□□□□ -0.47
TMEM116-216ENST00000552800 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-216ENST00000552800 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
TMEM116-216ENST00000552800 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
TMEM116-216ENST00000552800 SURF6O75683 361 aaKnown RBP12.11□□□□□ -0.47
TMEM116-216ENST00000552800 CSF1RP07333 972 aa12.11□□□□□ -0.47
TMEM116-216ENST00000552800 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
TMEM116-216ENST00000552800 ANP32AP39687 249 aaKnown RBP12.11□□□□□ -0.47
TMEM116-216ENST00000552800 SIK1P57059 783 aa12.11□□□□□ -0.47
TMEM116-216ENST00000552800 FOXO4P98177 505 aa12.11□□□□□ -0.47
TMEM116-216ENST00000552800 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-216ENST00000552800 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
TMEM116-216ENST00000552800 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-216ENST00000552800 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
TMEM116-216ENST00000552800 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
TMEM116-216ENST00000552800 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
TMEM116-216ENST00000552800 A0A087WZG4 1122 aa12.1□□□□□ -0.47
TMEM116-216ENST00000552800 PCCAP05165 728 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-216ENST00000552800 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
TMEM116-216ENST00000552800 ZNF34Q8IZ26 560 aa12.1□□□□□ -0.47
TMEM116-216ENST00000552800 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
TMEM116-216ENST00000552800 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
TMEM116-216ENST00000552800 GPR108Q9NPR9 543 aa12.1□□□□□ -0.47
TMEM116-216ENST00000552800 EXOC6BQ9Y2D4 811 aa12.1□□□□□ -0.47
TMEM116-216ENST00000552800 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-216ENST00000552800 MYH14Q7Z406 1995 aaKnown RBP12.1□□□□□ -0.47
TMEM116-216ENST00000552800 NUP98P52948 1817 aa12.09□□□□□ -0.47
TMEM116-216ENST00000552800 PTPN12Q05209 780 aaKnown RBP12.09□□□□□ -0.47
TMEM116-216ENST00000552800 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
TMEM116-216ENST00000552800 EPHA10Q5JZY3 1008 aa12.09□□□□□ -0.47
TMEM116-216ENST00000552800 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
TMEM116-216ENST00000552800 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
TMEM116-216ENST00000552800 ANKRD36CQ5JPF3 1778 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 NHSQ6T4R5 1651 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 CDC45O75419 566 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 SASH1O94885 1247 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 MX1P20591 662 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 EMP3P54852 163 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 SBF2Q86WG5 1849 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.48
TMEM116-216ENST00000552800 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
TMEM116-216ENST00000552800 CIAO1O76071 339 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 SDSP20132 328 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 ITPK1Q13572 414 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 TBC1D9Q6ZT07 1266 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 PI4K2BQ8TCG2 481 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 OTUD7AQ8TE49 926 aaPredicted RBP12.07□□□□□ -0.48
TMEM116-216ENST00000552800 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
TMEM116-216ENST00000552800 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
TMEM116-216ENST00000552800 LY75O60449 1722 aa12.06□□□□□ -0.48
TMEM116-216ENST00000552800 ATP6V1AP38606 617 aa12.06□□□□□ -0.48
TMEM116-216ENST00000552800 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-216ENST00000552800 NLRP10Q86W26 655 aa12.06□□□□□ -0.48
TMEM116-216ENST00000552800 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
TMEM116-216ENST00000552800 AFF2P51816 1311 aa12.06□□□□□ -0.48
TMEM116-216ENST00000552800 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
TMEM116-216ENST00000552800 KCNQ2O43526 872 aa12.05□□□□□ -0.48
TMEM116-216ENST00000552800 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
TMEM116-216ENST00000552800 CRKLP46109 303 aaKnown RBP12.05□□□□□ -0.48
TMEM116-216ENST00000552800 G3BP1Q13283 466 aaKnown RBP eCLIP12.05□□□□□ -0.48
TMEM116-216ENST00000552800 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
TMEM116-216ENST00000552800 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
TMEM116-216ENST00000552800 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
TMEM116-216ENST00000552800 POTEB3A0JP26 581 aa12.04□□□□□ -0.48
TMEM116-216ENST00000552800 HLFQ16534 295 aa12.04□□□□□ -0.48
TMEM116-216ENST00000552800 PARP10Q53GL7 1025 aa12.04□□□□□ -0.48
TMEM116-216ENST00000552800 POTEBQ6S5H4 581 aa12.04□□□□□ -0.48
TMEM116-216ENST00000552800 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
TMEM116-216ENST00000552800 C22orf23Q9BZE7 217 aa12.04□□□□□ -0.48
TMEM116-216ENST00000552800 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
TMEM116-216ENST00000552800 BTAF1O14981 1849 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 G3V3G9 751 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 ERC2O15083 957 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 CAMTA2O94983 1202 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 HSP90B1P14625 803 aaKnown RBP12.03□□□□□ -0.48
TMEM116-216ENST00000552800 IL15P40933 162 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-216ENST00000552800 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 ATG9AQ7Z3C6 839 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 DZIP3Q86Y13 1208 aaKnown RBP12.03□□□□□ -0.48
TMEM116-216ENST00000552800 SYTL4Q96C24 671 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-216ENST00000552800 EAF2Q96CJ1 260 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-216ENST00000552800 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-216ENST00000552800 USP26Q9BXU7 913 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
TMEM116-216ENST00000552800 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
TMEM116-216ENST00000552800 RTL9Q8NET4 1388 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms