RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 IRX2Q9BZI1 471 aaPredicted RBP7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 CXXC1Q9P0U4 656 aaPredicted RBP7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 HECW2Q9P2P5 1572 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 U2AF1L5P0DN76 240 aaPredicted RBP7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 ERVK-9P63128 1117 aa7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 U2AF1Q01081 240 aaKnown RBP eCLIP7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 FRAT1Q92837 279 aaPredicted RBP7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 UPF2Q9HAU5 1272 aaKnown RBP7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 TERF2IPQ9NYB0 399 aa7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 FRMPD1Q5SYB0 1578 aa7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 ATAD2Q6PL18 1390 aa7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 ABCC11Q96J66 1382 aa7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 SHPRHQ149N8 1683 aa7.57□□□□□ -1.2
CHMP4A-210ENST00000552620 BACH1O14867 736 aa7.56□□□□□ -1.2
CHMP4A-210ENST00000552620 SCTRP47872 440 aa7.56□□□□□ -1.2
CHMP4A-210ENST00000552620 MVPQ14764 893 aaKnown RBP7.56□□□□□ -1.2
CHMP4A-210ENST00000552620 DZIP1LQ8IYY4 767 aaKnown RBP7.56□□□□□ -1.2
CHMP4A-210ENST00000552620 PRIMPOLQ96LW4 560 aa7.56□□□□□ -1.2
CHMP4A-210ENST00000552620 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
CHMP4A-210ENST00000552620 PIK3C2BO00750 1634 aa7.56□□□□□ -1.2
CHMP4A-210ENST00000552620 MED14O60244 1454 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 USP19O94966 1318 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 IPO8O15397 1037 aaKnown RBP7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 ADH1CP00326 375 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 TNNT2P45379 298 aaPredicted RBP7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 NR5A1Q13285 461 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 IDI1Q13907 227 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 OCLNQ16625 522 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 TAS1R3Q7RTX0 852 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 CCDC116Q8IYX3 515 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 TSEN2Q8NCE0 465 aaKnown RBP7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 ZNF428Q96B54 188 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 CYLDQ9NQC7 956 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 PDZRN3Q9UPQ7 1066 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 RRP7AQ9Y3A4 280 aaKnown RBP7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 TLL2Q9Y6L7 1015 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 NEXMIFQ5QGS0 1516 aa7.55□□□□□ -1.2
CHMP4A-210ENST00000552620 GLI2P10070 1586 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 CAMSAP1Q5T5Y3 1602 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 SOWAHDA6NJG2 315 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 GRM5P41594 1212 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 TMPOP42166 694 aaKnown RBP7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 SERPINB4P48594 390 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 HDAC1Q13547 482 aaPredicted RBP7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 LIAT1Q6ZQX7 453 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 CYP2U1Q7Z449 544 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 HDGFL2Q7Z4V5 671 aaPredicted RBP7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 CHMP4BQ9H444 224 aaKnown RBP7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 ZNF358Q9NW07 568 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 DDX19BQ9UMR2 479 aa7.54□□□□□ -1.2
CHMP4A-210ENST00000552620 TULP4Q9NRJ4 1543 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 WASLO00401 505 aaPredicted RBP7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 WNT7AO00755 349 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 PTCD1O75127 700 aaKnown RBP7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 RLBP1P12271 317 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 WEE1P30291 646 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 ALDH1L2Q3SY69 923 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 FTSJ3Q8IY81 847 aaKnown RBP7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 ZNF784Q8NCA9 323 aaPredicted RBP7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 TBC1D32Q96NH3 1257 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 OSBPL3Q9H4L5 887 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 TMPRSS4Q9NRS4 437 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 PGPEP1Q9NXJ5 209 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 EGFL7Q9UHF1 273 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 ADGRB2O60241 1585 aa7.53□□□□□ -1.2
CHMP4A-210ENST00000552620 ARHGEF28Q8N1W1 1705 aaKnown RBP7.52□□□□□ -1.2
CHMP4A-210ENST00000552620 VIRMAQ69YN4 1812 aaKnown RBP7.52□□□□□ -1.2
CHMP4A-210ENST00000552620 CFAP65Q6ZU64 1925 aaKnown RBP7.52□□□□□ -1.2
CHMP4A-210ENST00000552620 PNPLA6Q8IY17 1366 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 FYB1O15117 783 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 SIAH2O43255 324 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 DIAPH1O60610 1272 aaKnown RBP7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 ABL1P00519 1130 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 SLC19A1P41440 591 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 GDF10P55107 478 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 PPP1R26Q5T8A7 1209 aaPredicted RBP7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 POGKQ9P215 609 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 BIN2Q9UBW5 565 aaPredicted RBP7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 AMOTL2Q9Y2J4 779 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
CHMP4A-210ENST00000552620 A0A1W2PP64 1363 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 TMEM229AB2RXF0 380 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 U2SURPO15042 1029 aaKnown RBP7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 RAPGEF3O95398 923 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 GNRH1P01148 92 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 ERCC3P19447 782 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 IGFBP4P22692 258 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 CALD1Q05682 793 aaKnown RBP7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 EXOSC9Q06265 439 aaKnown RBP7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 ATF7IPQ6VMQ6 1270 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 SMC4Q9NTJ3 1288 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 KIF16BQ96L93 1317 aa7.51□□□□□ -1.21
CHMP4A-210ENST00000552620 DIP2CQ9Y2E4 1556 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms