RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 TAF1DQ9H5J8 278 aaPredicted RBP18■□□□□ 0.47
DDX54-210ENST00000552375 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
DDX54-210ENST00000552375 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
DDX54-210ENST00000552375 HTRA3P83110 453 aa17.99■□□□□ 0.47
DDX54-210ENST00000552375 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
DDX54-210ENST00000552375 DPP8Q6V1X1 898 aaPredicted RBP17.99■□□□□ 0.47
DDX54-210ENST00000552375 SP8Q8IXZ3 490 aa17.99■□□□□ 0.47
DDX54-210ENST00000552375 NIM1KQ8IY84 436 aa17.99■□□□□ 0.47
DDX54-210ENST00000552375 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
DDX54-210ENST00000552375 SUPT20HQ8NEM7 779 aa17.99■□□□□ 0.47
DDX54-210ENST00000552375 POTEIP0CG38 1075 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 POTEJP0CG39 1038 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 AOC3Q16853 763 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
DDX54-210ENST00000552375 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 LDHDQ86WU2 507 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 DNAJC5GQ8N7S2 189 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 METTL22Q9BUU2 404 aaPredicted RBP17.98■□□□□ 0.47
DDX54-210ENST00000552375 VPS33BQ9H267 617 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 HACL1Q9UJ83 578 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 LRRC37AA6NMS7 1700 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
DDX54-210ENST00000552375 TAF1P21675 1872 aa17.97■□□□□ 0.47
DDX54-210ENST00000552375 DUOX1Q9NRD9 1551 aa17.97■□□□□ 0.47
DDX54-210ENST00000552375 HSP90B1P14625 803 aaKnown RBP17.97■□□□□ 0.47
DDX54-210ENST00000552375 MPNDQ8N594 471 aa17.97■□□□□ 0.47
DDX54-210ENST00000552375 CWC25Q9NXE8 425 aaPredicted RBP17.97■□□□□ 0.47
DDX54-210ENST00000552375 SCN4AP35499 1836 aa17.97■□□□□ 0.47
DDX54-210ENST00000552375 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
DDX54-210ENST00000552375 EPHX2P34913 555 aa17.96■□□□□ 0.47
DDX54-210ENST00000552375 KSR2Q6VAB6 950 aa17.96■□□□□ 0.47
DDX54-210ENST00000552375 CELF1Q92879 486 aaKnown RBP17.96■□□□□ 0.47
DDX54-210ENST00000552375 MYH16Q9H6N6 1097 aa17.96■□□□□ 0.47
DDX54-210ENST00000552375 MAP3K2Q9Y2U5 619 aa17.96■□□□□ 0.47
DDX54-210ENST00000552375 PI4KAP2A4QPH2 592 aa17.95■□□□□ 0.46
DDX54-210ENST00000552375 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
DDX54-210ENST00000552375 PI4KAP1Q8N8J0 262 aa17.95■□□□□ 0.46
DDX54-210ENST00000552375 KLRG1Q96E93 195 aa17.95■□□□□ 0.46
DDX54-210ENST00000552375 COL4A1P02462 1669 aa17.94■□□□□ 0.46
DDX54-210ENST00000552375 EAPPQ56P03 285 aaPredicted RBP17.94■□□□□ 0.46
DDX54-210ENST00000552375 GJA3Q9Y6H8 435 aa17.94■□□□□ 0.46
DDX54-210ENST00000552375 MYH3P11055 1940 aa17.94■□□□□ 0.46
DDX54-210ENST00000552375 SPEF2Q9C093 1822 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 LMOD1P29536 600 aaPredicted RBP17.93■□□□□ 0.46
DDX54-210ENST00000552375 SCNN1DP51172 638 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
DDX54-210ENST00000552375 ZNRF3Q9ULT6 936 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 ADAMTSL1Q8N6G6 1762 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 CDHR2Q9BYE9 1310 aa17.93■□□□□ 0.46
DDX54-210ENST00000552375 PDE8AO60658 829 aa17.92■□□□□ 0.46
DDX54-210ENST00000552375 FLIIQ13045 1269 aa17.92■□□□□ 0.46
DDX54-210ENST00000552375 CCDC152Q4G0S7 254 aa17.92■□□□□ 0.46
DDX54-210ENST00000552375 G2E3Q7L622 706 aa17.92■□□□□ 0.46
DDX54-210ENST00000552375 CDCA7LQ96GN5 454 aa17.92■□□□□ 0.46
DDX54-210ENST00000552375 LTBP1Q14766 1721 aa17.91■□□□□ 0.46
DDX54-210ENST00000552375 PASKQ96RG2 1323 aa17.91■□□□□ 0.46
DDX54-210ENST00000552375 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
DDX54-210ENST00000552375 VAMP4O75379 141 aa17.9■□□□□ 0.46
DDX54-210ENST00000552375 RPS8P62241 208 aaKnown RBP17.9■□□□□ 0.46
DDX54-210ENST00000552375 JMYQ8N9B5 988 aa17.9■□□□□ 0.46
DDX54-210ENST00000552375 SEC31BQ9NQW1 1179 aa17.9■□□□□ 0.46
DDX54-210ENST00000552375 CREBZFQ9NS37 354 aa17.9■□□□□ 0.46
DDX54-210ENST00000552375 NSFL1CQ9UNZ2 370 aaKnown RBP17.9■□□□□ 0.46
DDX54-210ENST00000552375 PCNTO95613 3336 aa17.9■□□□□ 0.46
DDX54-210ENST00000552375 CTSWP56202 376 aa17.89■□□□□ 0.45
DDX54-210ENST00000552375 GPSM2P81274 684 aa17.89■□□□□ 0.45
DDX54-210ENST00000552375 CXCL9Q07325 125 aa17.89■□□□□ 0.45
DDX54-210ENST00000552375 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
DDX54-210ENST00000552375 CWF19L2Q2TBE0 894 aaKnown RBP17.89■□□□□ 0.45
DDX54-210ENST00000552375 JARID2Q92833 1246 aaPredicted RBP17.89■□□□□ 0.45
DDX54-210ENST00000552375 E9PSI1 815 aa17.88■□□□□ 0.45
DDX54-210ENST00000552375 HNRNPUQ00839 825 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDX54-210ENST00000552375 CIAPIN1Q6FI81 312 aa17.88■□□□□ 0.45
DDX54-210ENST00000552375 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
DDX54-210ENST00000552375 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
DDX54-210ENST00000552375 EPS15P42566 896 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 SLFN5Q08AF3 891 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 WASHC4Q2M389 1173 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 DNAAF4Q8WXU2 420 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 CCDC85AQ96PX6 553 aaPredicted RBP17.87■□□□□ 0.45
DDX54-210ENST00000552375 EYA3Q99504 573 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 GPRC5DQ9NZD1 345 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 POLLQ9UGP5 575 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 RTL9Q8NET4 1388 aa17.87■□□□□ 0.45
DDX54-210ENST00000552375 YDJCA8MPS7 323 aa17.86■□□□□ 0.45
DDX54-210ENST00000552375 C6orf229H3BNL8 230 aa17.86■□□□□ 0.45
DDX54-210ENST00000552375 RAD17O75943 681 aa17.86■□□□□ 0.45
DDX54-210ENST00000552375 GMPSP49915 693 aaPredicted RBP17.86■□□□□ 0.45
DDX54-210ENST00000552375 TNIP1Q15025 636 aa17.86■□□□□ 0.45
DDX54-210ENST00000552375 MAP1SQ66K74 1059 aaPredicted RBP17.86■□□□□ 0.45
DDX54-210ENST00000552375 USP50Q70EL3 339 aaPredicted RBP17.86■□□□□ 0.45
DDX54-210ENST00000552375 TBC1D16Q8TBP0 767 aa17.86■□□□□ 0.45
DDX54-210ENST00000552375 PODXL2Q9NZ53 605 aa17.86■□□□□ 0.45
DDX54-210ENST00000552375 GCKRQ14397 625 aa17.85■□□□□ 0.45
DDX54-210ENST00000552375 UBE3BQ7Z3V4 1068 aa17.85■□□□□ 0.45
DDX54-210ENST00000552375 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
DDX54-210ENST00000552375 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms