RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 OLFM4Q6UX06 510 aa23.42■■□□□ 1.34
PRPF40B-216ENST00000552301 SRCIN1Q9C0H9 1055 aa23.42■■□□□ 1.34
PRPF40B-216ENST00000552301 SBF1O95248 1867 aa23.42■■□□□ 1.34
PRPF40B-216ENST00000552301 H7C1W4 665 aa23.41■■□□□ 1.34
PRPF40B-216ENST00000552301 ALDH1L1O75891 902 aa23.41■■□□□ 1.34
PRPF40B-216ENST00000552301 FKBP4Q02790 459 aaKnown RBP eCLIP23.41■■□□□ 1.34
PRPF40B-216ENST00000552301 GRIPAP1Q4V328 841 aa23.41■■□□□ 1.34
PRPF40B-216ENST00000552301 TMC4Q7Z404 712 aa23.41■■□□□ 1.34
PRPF40B-216ENST00000552301 RARSP54136 660 aaKnown RBP23.4■■□□□ 1.34
PRPF40B-216ENST00000552301 CTSWP56202 376 aa23.4■■□□□ 1.34
PRPF40B-216ENST00000552301 ATP6V0A2Q9Y487 856 aa23.4■■□□□ 1.34
PRPF40B-216ENST00000552301 KIF16BQ96L93 1317 aa23.39■■□□□ 1.34
PRPF40B-216ENST00000552301 CCDC88AQ3V6T2 1871 aa23.39■■□□□ 1.34
PRPF40B-216ENST00000552301 CCDC85AQ96PX6 553 aaPredicted RBP23.39■■□□□ 1.33
PRPF40B-216ENST00000552301 C9orf78Q9NZ63 289 aaPredicted RBP23.39■■□□□ 1.33
PRPF40B-216ENST00000552301 MYH3P11055 1940 aa23.39■■□□□ 1.33
PRPF40B-216ENST00000552301 ZC3H4Q9UPT8 1303 aaKnown RBP23.38■■□□□ 1.33
PRPF40B-216ENST00000552301 ZNF526Q8TF50 670 aaPredicted RBP23.38■■□□□ 1.33
PRPF40B-216ENST00000552301 GRM8O00222 908 aa23.37■■□□□ 1.33
PRPF40B-216ENST00000552301 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
PRPF40B-216ENST00000552301 CELF1Q92879 486 aaKnown RBP23.37■■□□□ 1.33
PRPF40B-216ENST00000552301 API5Q9BZZ5 524 aaKnown RBP23.37■■□□□ 1.33
PRPF40B-216ENST00000552301 BRPF1P55201 1214 aaPredicted RBP23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 PSMD1Q99460 953 aa23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 PLA2G12BQ9BX93 195 aa23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 GPBP1L1Q9HC44 474 aaPredicted RBP23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 ZNF277Q9NRM2 450 aaPredicted RBP23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 TAF1P21675 1872 aa23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 TIAM2Q8IVF5 1701 aa23.36■■□□□ 1.33
PRPF40B-216ENST00000552301 PRELPP51888 382 aa23.35■■□□□ 1.33
PRPF40B-216ENST00000552301 RPS8P62241 208 aaKnown RBP23.35■■□□□ 1.33
PRPF40B-216ENST00000552301 CDC5LQ99459 802 aaKnown RBP23.35■■□□□ 1.33
PRPF40B-216ENST00000552301 SEC31BQ9NQW1 1179 aa23.35■■□□□ 1.33
PRPF40B-216ENST00000552301 CASP7P55210 303 aa23.34■■□□□ 1.33
PRPF40B-216ENST00000552301 DPP8Q6V1X1 898 aaPredicted RBP23.34■■□□□ 1.33
PRPF40B-216ENST00000552301 TTLL11Q8NHH1 800 aa23.34■■□□□ 1.33
PRPF40B-216ENST00000552301 DICER1Q9UPY3 1922 aaKnown RBP23.33■■□□□ 1.33
PRPF40B-216ENST00000552301 IARSP41252 1262 aaKnown RBP23.33■■□□□ 1.33
PRPF40B-216ENST00000552301 ANKRD18AQ8IVF6 992 aa23.33■■□□□ 1.33
PRPF40B-216ENST00000552301 MPNDQ8N594 471 aa23.33■■□□□ 1.33
PRPF40B-216ENST00000552301 SUPT20HQ8NEM7 779 aa23.33■■□□□ 1.33
PRPF40B-216ENST00000552301 SNED1Q8TER0 1413 aa23.33■■□□□ 1.32
PRPF40B-216ENST00000552301 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.32
PRPF40B-216ENST00000552301 RTL9Q8NET4 1388 aa23.32■■□□□ 1.32
PRPF40B-216ENST00000552301 IPO8O15397 1037 aaKnown RBP23.32■■□□□ 1.32
PRPF40B-216ENST00000552301 SLC51AQ86UW1 340 aa23.32■■□□□ 1.32
PRPF40B-216ENST00000552301 GREM2Q9H772 168 aa23.32■■□□□ 1.32
PRPF40B-216ENST00000552301 CHMP3Q9Y3E7 222 aa23.32■■□□□ 1.32
PRPF40B-216ENST00000552301 CCT4P50991 539 aaKnown RBP23.31■■□□□ 1.32
PRPF40B-216ENST00000552301 LRRC37AA6NMS7 1700 aa23.3■■□□□ 1.32
PRPF40B-216ENST00000552301 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
PRPF40B-216ENST00000552301 JDP2Q8WYK2 163 aa23.3■■□□□ 1.32
PRPF40B-216ENST00000552301 ARHGAP45Q92619 1136 aa23.3■■□□□ 1.32
PRPF40B-216ENST00000552301 FRAT1Q92837 279 aaPredicted RBP23.3■■□□□ 1.32
PRPF40B-216ENST00000552301 IGHMBP2P38935 993 aaKnown RBP23.29■■□□□ 1.32
PRPF40B-216ENST00000552301 DPY19L2Q6NUT2 758 aa23.29■■□□□ 1.32
PRPF40B-216ENST00000552301 LARGE2Q8N3Y3 721 aa23.29■■□□□ 1.32
PRPF40B-216ENST00000552301 NSFL1CQ9UNZ2 370 aaKnown RBP23.29■■□□□ 1.32
PRPF40B-216ENST00000552301 PPIP5K2O43314 1243 aa23.28■■□□□ 1.32
PRPF40B-216ENST00000552301 BCAR3O75815 825 aa23.28■■□□□ 1.32
PRPF40B-216ENST00000552301 ITGA6P23229 1130 aa23.28■■□□□ 1.32
PRPF40B-216ENST00000552301 COL4A1P02462 1669 aa23.28■■□□□ 1.32
PRPF40B-216ENST00000552301 ANKRD18BA2A2Z9 1011 aa23.27■■□□□ 1.32
PRPF40B-216ENST00000552301 CSF1RP07333 972 aa23.27■■□□□ 1.32
PRPF40B-216ENST00000552301 RTFDC1Q9BY42 306 aaPredicted RBP23.27■■□□□ 1.32
PRPF40B-216ENST00000552301 ANKIB1Q9P2G1 1089 aa23.27■■□□□ 1.32
PRPF40B-216ENST00000552301 GLTPD2A6NH11 291 aa23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 NBPF7P0C2Y1 421 aaPredicted RBP23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 IFIT5Q13325 482 aaKnown RBP23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 LMBR1LQ6UX01 489 aa23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 NIM1KQ8IY84 436 aa23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 SUCLG2Q96I99 432 aa23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 MPHOSPH8Q99549 860 aa23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 VPS33BQ9H267 617 aa23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 UTYO14607 1347 aa23.26■■□□□ 1.31
PRPF40B-216ENST00000552301 C6orf229H3BNL8 230 aa23.25■■□□□ 1.31
PRPF40B-216ENST00000552301 GPSM2P81274 684 aa23.25■■□□□ 1.31
PRPF40B-216ENST00000552301 FOXO4P98177 505 aa23.25■■□□□ 1.31
PRPF40B-216ENST00000552301 TAF7LQ5H9L4 462 aa23.25■■□□□ 1.31
PRPF40B-216ENST00000552301 ATF7IPQ6VMQ6 1270 aa23.25■■□□□ 1.31
PRPF40B-216ENST00000552301 SPEF2Q9C093 1822 aa23.24■■□□□ 1.31
PRPF40B-216ENST00000552301 AOC3Q16853 763 aa23.24■■□□□ 1.31
PRPF40B-216ENST00000552301 CCDC57Q2TAC2 916 aa23.24■■□□□ 1.31
PRPF40B-216ENST00000552301 EPHA10Q5JZY3 1008 aa23.24■■□□□ 1.31
PRPF40B-216ENST00000552301 ZKSCAN2Q63HK3 967 aa23.24■■□□□ 1.31
PRPF40B-216ENST00000552301 BSDC1Q9NW68 430 aaPredicted RBP23.24■■□□□ 1.31
PRPF40B-216ENST00000552301 TRIM27P14373 513 aa23.23■■□□□ 1.31
PRPF40B-216ENST00000552301 EIF6P56537 245 aaKnown RBP23.23■■□□□ 1.31
PRPF40B-216ENST00000552301 EYA3Q99504 573 aa23.23■■□□□ 1.31
PRPF40B-216ENST00000552301 USP44Q9H0E7 712 aa23.23■■□□□ 1.31
PRPF40B-216ENST00000552301 GGA1Q9UJY5 639 aa23.23■■□□□ 1.31
PRPF40B-216ENST00000552301 UFL1O94874 794 aa23.22■■□□□ 1.31
PRPF40B-216ENST00000552301 UBTFL1P0CB47 393 aaPredicted RBP23.22■■□□□ 1.31
PRPF40B-216ENST00000552301 KIAA2012Q0VF49 1180 aa23.22■■□□□ 1.31
PRPF40B-216ENST00000552301 NMRK2Q9NPI5 230 aa23.22■■□□□ 1.31
PRPF40B-216ENST00000552301 HDAC5Q9UQL6 1122 aa23.22■■□□□ 1.31
PRPF40B-216ENST00000552301 XDHP47989 1333 aa23.22■■□□□ 1.31
PRPF40B-216ENST00000552301 DUOX1Q9NRD9 1551 aa23.22■■□□□ 1.31
PRPF40B-216ENST00000552301 BICC1Q9H694 974 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms