RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	KRT24	Q2M2I5	525 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	DPP8	Q6V1X1	898 aa	Predicted RBP	11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	MPND	Q8N594	471 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	EYA3	Q99504	573 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	HDAC5	Q9UQL6	1122 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	PI4KAP2	A4QPH2	592 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	ANXA1	P04083	346 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	MMP14	P50281	582 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	RPS8	P62241	208 aa	Known RBP	11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	RASSF7	Q02833	373 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	CHRDL2	Q6WN34	429 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	NIM1K	Q8IY84	436 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	LARGE2	Q8N3Y3	721 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	PI4KAP1	Q8N8J0	262 aa		11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	CDC5L	Q99459	802 aa	Known RBP	11.52	□□□□□ -0.57
ATXN2-223	ENST00000551551	VAMP4	O75379	141 aa		11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	LMOD1	P29536	600 aa	Predicted RBP	11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	CCDC184	Q52MB2	194 aa		11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	LINS1	Q8NG48	757 aa		11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	FAM89A	Q96GI7	184 aa		11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	NMRK2	Q9NPI5	230 aa		11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	MAP3K2	Q9Y2U5	619 aa		11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	CDHR2	Q9BYE9	1310 aa		11.51	□□□□□ -0.57
ATXN2-223	ENST00000551551	ATP5J2-PTCD1	G3V325	749 aa		11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	HCLS1	P14317	486 aa	Predicted RBP	11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	FKBP5	Q13451	457 aa	Predicted RBP	11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	TSR2	Q969E8	191 aa	Known RBP	11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	MYD88	Q99836	296 aa		11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	PHAX	Q9H814	394 aa	Known RBP	11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	HACL1	Q9UJ83	578 aa		11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	ZNRF3	Q9ULT6	936 aa		11.5	□□□□□ -0.57
ATXN2-223	ENST00000551551	SBF1	O95248	1867 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551		G3V3G9	751 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	FLII	Q13045	1269 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	WASHC4	Q2M389	1173 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	DCAF8	Q5TAQ9	597 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	LDHD	Q86WU2	507 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	DNAAF4	Q8WXU2	420 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	GTF3C3	Q9Y5Q9	886 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	ABCC4	O15439	1325 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	FANCI	Q9NVI1	1328 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	ANKRD31	Q8N7Z5	1873 aa		11.49	□□□□□ -0.57
ATXN2-223	ENST00000551551	PPIP5K2	O43314	1243 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	KIAA2012	Q0VF49	1180 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	CHADL	Q6NUI6	762 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	USP50	Q70EL3	339 aa	Predicted RBP	11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	ANKRD18A	Q8IVF6	992 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	TSPYL6	Q8N831	410 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	PLA2G12B	Q9BX93	195 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	PODXL2	Q9NZ53	605 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	ABCC12	Q96J65	1359 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	FER1L6	Q2WGJ9	1857 aa		11.48	□□□□□ -0.57
ATXN2-223	ENST00000551551	SLX4	Q8IY92	1834 aa		11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	ARFGEF2	Q9Y6D5	1785 aa		11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	DDN	O94850	711 aa	Predicted RBP	11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	EXOSC9	Q06265	439 aa	Known RBP	11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	ZC3H15	Q8WU90	426 aa	Known RBP	11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	ANKIB1	Q9P2G1	1089 aa		11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	CACNA1F	O60840	1977 aa		11.47	□□□□□ -0.57
ATXN2-223	ENST00000551551	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	PTPRC	P08575	1304 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	NEURL1B	A8MQ27	555 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551		H7C1W4	665 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	ALDH1L1	O75891	902 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	RPS12	P25398	132 aa	Known RBP	11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	IGHMBP2	P38935	993 aa	Known RBP	11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	GCKR	Q14397	625 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	ALDH1L2	Q3SY69	923 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	DPF2	Q92785	391 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	ANKRD2	Q9GZV1	360 aa		11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	BSDC1	Q9NW68	430 aa	Predicted RBP	11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	SALL2	Q9Y467	1007 aa	Predicted RBP	11.46	□□□□□ -0.57
ATXN2-223	ENST00000551551	RTL9	Q8NET4	1388 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	DICER1	Q9UPY3	1922 aa	Known RBP	11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	C6orf229	H3BNL8	230 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551		H7C1D1	291 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	ATP2B4	P23634	1241 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	EPHX2	P34913	555 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	PRELP	P51888	382 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	CTSW	P56202	376 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	CIAPIN1	Q6FI81	312 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	PODN	Q7Z5L7	613 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	MPHOSPH8	Q99549	860 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	GGA1	Q9UJY5	639 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	FBXO3	Q9UK99	471 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	LEMD3	Q9Y2U8	911 aa		11.45	□□□□□ -0.58
ATXN2-223	ENST00000551551	WDR90	Q96KV7	1748 aa		11.44	□□□□□ -0.58
ATXN2-223	ENST00000551551	TTLL11	Q8NHH1	800 aa		11.44	□□□□□ -0.58
ATXN2-223	ENST00000551551	ADARB2	Q9NS39	739 aa	Known RBP	11.44	□□□□□ -0.58
ATXN2-223	ENST00000551551	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.44	□□□□□ -0.58
ATXN2-223	ENST00000551551	CLEC11A	Q9Y240	323 aa		11.44	□□□□□ -0.58
ATXN2-223	ENST00000551551	ANKRD36C	Q5JPF3	1778 aa		11.44	□□□□□ -0.58
ATXN2-223	ENST00000551551	XDH	P47989	1333 aa		11.43	□□□□□ -0.58
ATXN2-223	ENST00000551551	ZNF521	Q96K83	1311 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms