RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
LETMD1-229ENST00000551261 SLC10A5Q5PT55 438 aa17.46■□□□□ 0.39
LETMD1-229ENST00000551261 TPTE2Q6XPS3 522 aa17.46■□□□□ 0.39
LETMD1-229ENST00000551261 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
LETMD1-229ENST00000551261 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
LETMD1-229ENST00000551261 EP400Q96L91 3159 aa17.46■□□□□ 0.39
LETMD1-229ENST00000551261 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-229ENST00000551261 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
LETMD1-229ENST00000551261 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-229ENST00000551261 PROM2Q8N271 834 aa17.45■□□□□ 0.38
LETMD1-229ENST00000551261 PA2G4Q9UQ80 394 aaKnown RBP17.45■□□□□ 0.38
LETMD1-229ENST00000551261 PHF14O94880 888 aa17.44■□□□□ 0.38
LETMD1-229ENST00000551261 SASH1O94885 1247 aa17.44■□□□□ 0.38
LETMD1-229ENST00000551261 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-229ENST00000551261 BAG6P46379 1132 aa17.44■□□□□ 0.38
LETMD1-229ENST00000551261 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
LETMD1-229ENST00000551261 CASC1Q6TDU7 716 aa17.44■□□□□ 0.38
LETMD1-229ENST00000551261 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-229ENST00000551261 JARID2Q92833 1246 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-229ENST00000551261 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
LETMD1-229ENST00000551261 GLRX3O76003 335 aaKnown RBP17.43■□□□□ 0.38
LETMD1-229ENST00000551261 ITGA6P23229 1130 aa17.43■□□□□ 0.38
LETMD1-229ENST00000551261 SF3B3Q15393 1217 aaKnown RBP17.43■□□□□ 0.38
LETMD1-229ENST00000551261 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
LETMD1-229ENST00000551261 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
LETMD1-229ENST00000551261 TFCP2L1Q9NZI6 479 aa17.43■□□□□ 0.38
LETMD1-229ENST00000551261 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
LETMD1-229ENST00000551261 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
LETMD1-229ENST00000551261 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
LETMD1-229ENST00000551261 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
LETMD1-229ENST00000551261 CDC45O75419 566 aa17.42■□□□□ 0.38
LETMD1-229ENST00000551261 TICAM2Q86XR7 235 aa17.42■□□□□ 0.38
LETMD1-229ENST00000551261 SIL1Q9H173 461 aa17.42■□□□□ 0.38
LETMD1-229ENST00000551261 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
LETMD1-229ENST00000551261 ZNF609O15014 1411 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 GYS1P13807 737 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 TNNI3KQ59H18 835 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 AACSQ86V21 672 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 NLGN1Q8N2Q7 840 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 GREM2Q9H772 168 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 FPGT-TNNI3KV9GXZ4 949 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 MROH5Q6ZUA9 1318 aa17.41■□□□□ 0.38
LETMD1-229ENST00000551261 GSPT1P15170 499 aaKnown RBP17.4■□□□□ 0.38
LETMD1-229ENST00000551261 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
LETMD1-229ENST00000551261 C16orf71Q8IYS4 520 aaPredicted RBP17.4■□□□□ 0.38
LETMD1-229ENST00000551261 CNBD1Q8NA66 436 aa17.4■□□□□ 0.38
LETMD1-229ENST00000551261 NLRP3Q96P20 1036 aa17.4■□□□□ 0.38
LETMD1-229ENST00000551261 CEP126Q9P2H0 1117 aa17.4■□□□□ 0.38
LETMD1-229ENST00000551261 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
LETMD1-229ENST00000551261 ST5P78524 1137 aa17.39■□□□□ 0.37
LETMD1-229ENST00000551261 NFIXQ14938 502 aa17.39■□□□□ 0.37
LETMD1-229ENST00000551261 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
LETMD1-229ENST00000551261 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
LETMD1-229ENST00000551261 KLHDC4Q8TBB5 520 aa17.39■□□□□ 0.37
LETMD1-229ENST00000551261 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
LETMD1-229ENST00000551261 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
LETMD1-229ENST00000551261 NPHP1O15259 732 aa17.38■□□□□ 0.37
LETMD1-229ENST00000551261 HCLS1P14317 486 aaPredicted RBP17.38■□□□□ 0.37
LETMD1-229ENST00000551261 TFCP2Q12800 502 aa17.38■□□□□ 0.37
LETMD1-229ENST00000551261 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
LETMD1-229ENST00000551261 ERFEQ4G0M1 354 aa17.38■□□□□ 0.37
LETMD1-229ENST00000551261 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
LETMD1-229ENST00000551261 RFX7Q2KHR2 1363 aa17.38■□□□□ 0.37
LETMD1-229ENST00000551261 NRXN2Q9P2S2 1712 aa17.38■□□□□ 0.37
LETMD1-229ENST00000551261 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
LETMD1-229ENST00000551261 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
LETMD1-229ENST00000551261 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
LETMD1-229ENST00000551261 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
LETMD1-229ENST00000551261 EAF2Q96CJ1 260 aaPredicted RBP17.37■□□□□ 0.37
LETMD1-229ENST00000551261 MPHOSPH8Q99549 860 aa17.37■□□□□ 0.37
LETMD1-229ENST00000551261 CNNM1Q9NRU3 951 aa17.37■□□□□ 0.37
LETMD1-229ENST00000551261 CASZ1Q86V15 1759 aa17.37■□□□□ 0.37
LETMD1-229ENST00000551261 ARAP2Q8WZ64 1704 aa17.36■□□□□ 0.37
LETMD1-229ENST00000551261 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
LETMD1-229ENST00000551261 SDSP20132 328 aa17.36■□□□□ 0.37
LETMD1-229ENST00000551261 TM4SF1P30408 202 aa17.36■□□□□ 0.37
LETMD1-229ENST00000551261 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
LETMD1-229ENST00000551261 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.36■□□□□ 0.37
LETMD1-229ENST00000551261 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
LETMD1-229ENST00000551261 RIPOR2Q9Y4F9 1068 aa17.36■□□□□ 0.37
LETMD1-229ENST00000551261 ATP5JP18859 108 aa17.35■□□□□ 0.37
LETMD1-229ENST00000551261 SLC15A2Q16348 729 aa17.35■□□□□ 0.37
LETMD1-229ENST00000551261 METTL24Q5JXM2 366 aa17.35■□□□□ 0.37
LETMD1-229ENST00000551261 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
LETMD1-229ENST00000551261 PNPLA7Q6ZV29 1317 aa17.35■□□□□ 0.37
LETMD1-229ENST00000551261 HIP1O00291 1037 aa17.34■□□□□ 0.37
LETMD1-229ENST00000551261 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
LETMD1-229ENST00000551261 LRRC24Q50LG9 513 aa17.34■□□□□ 0.37
LETMD1-229ENST00000551261 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
LETMD1-229ENST00000551261 AK9Q5TCS8 1911 aa17.33■□□□□ 0.37
LETMD1-229ENST00000551261 PDE8BO95263 885 aa17.33■□□□□ 0.36
LETMD1-229ENST00000551261 SERPINB2P05120 415 aa17.33■□□□□ 0.36
LETMD1-229ENST00000551261 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.36
LETMD1-229ENST00000551261 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
LETMD1-229ENST00000551261 EVI5LQ96CN4 794 aa17.33■□□□□ 0.36
LETMD1-229ENST00000551261 BSDC1Q9NW68 430 aaPredicted RBP17.33■□□□□ 0.36
LETMD1-229ENST00000551261 DBNLQ9UJU6 430 aaKnown RBP17.33■□□□□ 0.36
LETMD1-229ENST00000551261 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms