RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 PLA2G12BQ9BX93 195 aa12.67□□□□□ -0.38
PFDN5-213ENST00000550964 TAOK3Q9H2K8 898 aa12.67□□□□□ -0.38
PFDN5-213ENST00000550964 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
PFDN5-213ENST00000550964 PPEF1O14829 653 aaPredicted RBP12.66□□□□□ -0.38
PFDN5-213ENST00000550964 C21orf2O43822 256 aa12.66□□□□□ -0.38
PFDN5-213ENST00000550964 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
PFDN5-213ENST00000550964 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
PFDN5-213ENST00000550964 SP8Q8IXZ3 490 aa12.66□□□□□ -0.38
PFDN5-213ENST00000550964 GRM8O00222 908 aa12.65□□□□□ -0.38
PFDN5-213ENST00000550964 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
PFDN5-213ENST00000550964 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
PFDN5-213ENST00000550964 PSMD1Q99460 953 aa12.65□□□□□ -0.38
PFDN5-213ENST00000550964 ATP6V0A2Q9Y487 856 aa12.65□□□□□ -0.38
PFDN5-213ENST00000550964 RTL9Q8NET4 1388 aa12.65□□□□□ -0.38
PFDN5-213ENST00000550964 UTRNP46939 3433 aa12.64□□□□□ -0.39
PFDN5-213ENST00000550964 CTSWP56202 376 aa12.64□□□□□ -0.39
PFDN5-213ENST00000550964 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
PFDN5-213ENST00000550964 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.39
PFDN5-213ENST00000550964 DPY19L2Q6NUT2 758 aa12.64□□□□□ -0.39
PFDN5-213ENST00000550964 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
PFDN5-213ENST00000550964 ABCC4O15439 1325 aa12.63□□□□□ -0.39
PFDN5-213ENST00000550964 F6X3S4 739 aa12.63□□□□□ -0.39
PFDN5-213ENST00000550964 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
PFDN5-213ENST00000550964 ANKRD18AQ8IVF6 992 aa12.63□□□□□ -0.39
PFDN5-213ENST00000550964 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
PFDN5-213ENST00000550964 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
PFDN5-213ENST00000550964 CHMP4BQ9H444 224 aaKnown RBP12.63□□□□□ -0.39
PFDN5-213ENST00000550964 NOB1Q9ULX3 412 aaKnown RBP12.63□□□□□ -0.39
PFDN5-213ENST00000550964 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
PFDN5-213ENST00000550964 ZKSCAN2Q63HK3 967 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 MPNDQ8N594 471 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 TTLL11Q8NHH1 800 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 UTYO14607 1347 aa12.62□□□□□ -0.39
PFDN5-213ENST00000550964 ANKRD18BA2A2Z9 1011 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 GNAI3P08754 354 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 IFIT5Q13325 482 aaKnown RBP12.61□□□□□ -0.39
PFDN5-213ENST00000550964 CCDC57Q2TAC2 916 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 DPP8Q6V1X1 898 aaPredicted RBP12.61□□□□□ -0.39
PFDN5-213ENST00000550964 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 EYA3Q99504 573 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 LRRC37AA6NMS7 1700 aa12.61□□□□□ -0.39
PFDN5-213ENST00000550964 TAF1P21675 1872 aa12.6□□□□□ -0.39
PFDN5-213ENST00000550964 CSF1RP07333 972 aa12.6□□□□□ -0.39
PFDN5-213ENST00000550964 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
PFDN5-213ENST00000550964 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
PFDN5-213ENST00000550964 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-213ENST00000550964 ANKRD2Q9GZV1 360 aa12.6□□□□□ -0.39
PFDN5-213ENST00000550964 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-213ENST00000550964 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-213ENST00000550964 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
PFDN5-213ENST00000550964 NFKBIEO00221 500 aa12.59□□□□□ -0.39
PFDN5-213ENST00000550964 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-213ENST00000550964 CASP7P55210 303 aa12.59□□□□□ -0.39
PFDN5-213ENST00000550964 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
PFDN5-213ENST00000550964 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
PFDN5-213ENST00000550964 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-213ENST00000550964 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-213ENST00000550964 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
PFDN5-213ENST00000550964 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
PFDN5-213ENST00000550964 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
PFDN5-213ENST00000550964 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
PFDN5-213ENST00000550964 XDHP47989 1333 aa12.58□□□□□ -0.4
PFDN5-213ENST00000550964 ITGA6P23229 1130 aa12.57□□□□□ -0.4
PFDN5-213ENST00000550964 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
PFDN5-213ENST00000550964 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
PFDN5-213ENST00000550964 CHMP3Q9Y3E7 222 aa12.57□□□□□ -0.4
PFDN5-213ENST00000550964 SPEF2Q9C093 1822 aa12.57□□□□□ -0.4
PFDN5-213ENST00000550964 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 G3V3G9 751 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 BCAR3O75815 825 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 NIM1KQ8IY84 436 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
PFDN5-213ENST00000550964 LARGE2Q8N3Y3 721 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 CELF1Q92879 486 aaKnown RBP12.56□□□□□ -0.4
PFDN5-213ENST00000550964 ZC3H12CQ9C0D7 883 aaKnown RBP12.56□□□□□ -0.4
PFDN5-213ENST00000550964 USP44Q9H0E7 712 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 GREM2Q9H772 168 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 GGA1Q9UJY5 639 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 RCAN3Q9UKA8 241 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 LEMD3Q9Y2U8 911 aa12.56□□□□□ -0.4
PFDN5-213ENST00000550964 SCN4AP35499 1836 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 IQCA1LA6NCM1 817 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 PPIP5K2O43314 1243 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 NBPF7P0C2Y1 421 aaPredicted RBP12.55□□□□□ -0.4
PFDN5-213ENST00000550964 TRIM27P14373 513 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 FOXO4P98177 505 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 RASSF7Q02833 373 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 WASHC4Q2M389 1173 aa12.55□□□□□ -0.4
PFDN5-213ENST00000550964 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms