RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CASP7P55210 303 aa13.3□□□□□ -0.28
LINC00661-204ENST00000549354 MYD88Q99836 296 aa13.3□□□□□ -0.28
LINC00661-204ENST00000549354 TTC12Q9H892 705 aaPredicted RBP13.3□□□□□ -0.28
LINC00661-204ENST00000549354 SPATA31A5Q5VU36 1347 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 SPATA31A7Q8IWB4 1347 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 MCCP23508 829 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 RABL6Q3YEC7 729 aaPredicted RBP13.29□□□□□ -0.28
LINC00661-204ENST00000549354 PRPF40BQ6NWY9 871 aaKnown RBP13.29□□□□□ -0.28
LINC00661-204ENST00000549354 GIMAP6Q6P9H5 292 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 USP48Q86UV5 1035 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
LINC00661-204ENST00000549354 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 ZKSCAN5Q9Y2L8 839 aa13.29□□□□□ -0.28
LINC00661-204ENST00000549354 HCLS1P14317 486 aaPredicted RBP13.29□□□□□ -0.28
LINC00661-204ENST00000549354 CASTP20810 708 aaKnown RBP13.29□□□□□ -0.28
LINC00661-204ENST00000549354 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
LINC00661-204ENST00000549354 CICQ96RK0 1608 aaPredicted RBP13.29□□□□□ -0.28
LINC00661-204ENST00000549354 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 TSPY26PQ9H489 355 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 TFIP11Q9UBB9 837 aaKnown RBP13.28□□□□□ -0.28
LINC00661-204ENST00000549354 TJP1Q07157 1748 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 BOLA2Q9H3K6 86 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 A1BGP04217 495 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 CHMLP26374 656 aa13.28□□□□□ -0.28
LINC00661-204ENST00000549354 H7C1W4 665 aa13.27□□□□□ -0.28
LINC00661-204ENST00000549354 A0A087WWV3 80 aa13.27□□□□□ -0.29
LINC00661-204ENST00000549354 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.29
LINC00661-204ENST00000549354 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.29
LINC00661-204ENST00000549354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC00661-204ENST00000549354 DOT1LQ8TEK3 1739 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.26□□□□□ -0.29
LINC00661-204ENST00000549354 PI4K2BQ8TCG2 481 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 JAKMIP1Q96N16 626 aaKnown RBP13.26□□□□□ -0.29
LINC00661-204ENST00000549354 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 TTLL7Q6ZT98 887 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 ZBTB9Q96C00 473 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 DDX11Q96FC9 970 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 TTC41PQ6P2S7 1318 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 LARGE1O95461 756 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 BRD1O95696 1058 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 FGD1P98174 961 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 PDLIM2Q96JY6 352 aa13.26□□□□□ -0.29
LINC00661-204ENST00000549354 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
LINC00661-204ENST00000549354 RFX5P48382 616 aaPredicted RBP13.25□□□□□ -0.29
LINC00661-204ENST00000549354 TRIM28Q13263 835 aaKnown RBP13.25□□□□□ -0.29
LINC00661-204ENST00000549354 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
LINC00661-204ENST00000549354 COPRSQ9NQ92 184 aa13.25□□□□□ -0.29
LINC00661-204ENST00000549354 RAB11FIP4Q86YS3 637 aa13.25□□□□□ -0.29
LINC00661-204ENST00000549354 CCDC191Q8NCU4 936 aa13.25□□□□□ -0.29
LINC00661-204ENST00000549354 ADCK5Q3MIX3 580 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 MBD3O95983 291 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 RREB1Q92766 1687 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 JCADQ9P266 1359 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 STARD3NLO95772 234 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 DNM1Q05193 864 aaKnown RBP13.24□□□□□ -0.29
LINC00661-204ENST00000549354 AACSQ86V21 672 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 DNAJC10Q8IXB1 793 aa13.24□□□□□ -0.29
LINC00661-204ENST00000549354 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 SASH1O94885 1247 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 IFIT2P09913 472 aaKnown RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 AK2P54819 239 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 A0A087WZG4 1122 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 IGSF3O75054 1194 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 PIP4K2BP78356 416 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 FOXO4P98177 505 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 PTH1RQ03431 593 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 FAM227BQ96M60 508 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 DDB1Q16531 1140 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 IL17RAQ96F46 866 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 DNAJC2Q99543 621 aaKnown RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.23□□□□□ -0.29
LINC00661-204ENST00000549354 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 ZNF831Q5JPB2 1677 aa13.23□□□□□ -0.29
LINC00661-204ENST00000549354 ADCY5O95622 1261 aa13.22□□□□□ -0.29
LINC00661-204ENST00000549354 ZNF500O60304 480 aaPredicted RBP13.22□□□□□ -0.29
LINC00661-204ENST00000549354 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
LINC00661-204ENST00000549354 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
LINC00661-204ENST00000549354 MARCH10Q8NA82 808 aaPredicted RBP13.22□□□□□ -0.29
LINC00661-204ENST00000549354 UBAP1LF5GYI3 381 aa13.21□□□□□ -0.29
LINC00661-204ENST00000549354 GUCY1B3Q02153 619 aa13.21□□□□□ -0.29
LINC00661-204ENST00000549354 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
LINC00661-204ENST00000549354 G3BP1Q13283 466 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00661-204ENST00000549354 TAF6LQ9Y6J9 622 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms