RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 TRPM4Q8TD43 1214 aa8.94□□□□□ -0.98
RNF41-204ENST00000548120 ZNF296Q8WUU4 475 aaPredicted RBP8.94□□□□□ -0.98
RNF41-204ENST00000548120 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
RNF41-204ENST00000548120 CSRNP1Q96S65 589 aa8.94□□□□□ -0.98
RNF41-204ENST00000548120 GBA2Q9HCG7 927 aaPredicted RBP8.94□□□□□ -0.98
RNF41-204ENST00000548120 TCERG1O14776 1098 aaKnown RBP8.93□□□□□ -0.98
RNF41-204ENST00000548120 PPIP5K2O43314 1243 aa8.93□□□□□ -0.98
RNF41-204ENST00000548120 SLC10A3P09131 477 aa8.93□□□□□ -0.98
RNF41-204ENST00000548120 ALDH1B1P30837 517 aa8.93□□□□□ -0.98
RNF41-204ENST00000548120 IL6STP40189 918 aaPredicted RBP8.93□□□□□ -0.98
RNF41-204ENST00000548120 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
RNF41-204ENST00000548120 SULT6B1Q6IMI4 303 aa8.93□□□□□ -0.98
RNF41-204ENST00000548120 FBXO46Q6PJ61 603 aaPredicted RBP8.93□□□□□ -0.98
RNF41-204ENST00000548120 DZIP3Q86Y13 1208 aaKnown RBP8.93□□□□□ -0.98
RNF41-204ENST00000548120 PNISRQ8TF01 805 aaKnown RBP8.93□□□□□ -0.98
RNF41-204ENST00000548120 FAM163AQ96GL9 167 aaPredicted RBP8.93□□□□□ -0.98
RNF41-204ENST00000548120 NPC1L1Q9UHC9 1359 aa8.93□□□□□ -0.98
RNF41-204ENST00000548120 SZT2Q5T011 3432 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 KLRG2A4D1S0 409 aaPredicted RBP8.92□□□□□ -0.98
RNF41-204ENST00000548120 POTEFA5A3E0 1075 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 RNMTO43148 476 aaKnown RBP8.92□□□□□ -0.98
RNF41-204ENST00000548120 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 TBC1D8O95759 1140 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 AOC3Q16853 763 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 C2orf69Q8N8R5 385 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 ZC3H15Q8WU90 426 aaKnown RBP8.92□□□□□ -0.98
RNF41-204ENST00000548120 BCL2L13Q9BXK5 485 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 BMP2KQ9NSY1 1161 aaPredicted RBP8.92□□□□□ -0.98
RNF41-204ENST00000548120 PGAP2Q9UHJ9 254 aa8.92□□□□□ -0.98
RNF41-204ENST00000548120 MKI67P46013 3256 aaKnown RBP8.92□□□□□ -0.98
RNF41-204ENST00000548120 SHTN1A0MZ66 631 aa8.91□□□□□ -0.98
RNF41-204ENST00000548120 ADM5C9JUS6 153 aa8.91□□□□□ -0.98
RNF41-204ENST00000548120 A1BGP04217 495 aa8.91□□□□□ -0.98
RNF41-204ENST00000548120 PIP4K2AP48426 406 aaPredicted RBP8.91□□□□□ -0.98
RNF41-204ENST00000548120 CXCL9Q07325 125 aa8.91□□□□□ -0.98
RNF41-204ENST00000548120 TPTE2Q6XPS3 522 aa8.91□□□□□ -0.98
RNF41-204ENST00000548120 ZNF496Q96IT1 587 aaPredicted RBP8.91□□□□□ -0.98
RNF41-204ENST00000548120 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.98
RNF41-204ENST00000548120 CDHR2Q9BYE9 1310 aa8.9□□□□□ -0.98
RNF41-204ENST00000548120 GTF2E1P29083 439 aaPredicted RBP8.9□□□□□ -0.98
RNF41-204ENST00000548120 TIE1P35590 1138 aa8.9□□□□□ -0.98
RNF41-204ENST00000548120 AMER1Q5JTC6 1135 aaPredicted RBP8.9□□□□□ -0.98
RNF41-204ENST00000548120 CC2D1BQ5T0F9 858 aaKnown RBP8.9□□□□□ -0.98
RNF41-204ENST00000548120 CC2D2BQ6DHV5 1058 aa8.9□□□□□ -0.98
RNF41-204ENST00000548120 KRT26Q7Z3Y9 468 aa8.9□□□□□ -0.98
RNF41-204ENST00000548120 RASAL3Q86YV0 1011 aa8.9□□□□□ -0.98
RNF41-204ENST00000548120 NIP7Q9Y221 180 aaKnown RBP eCLIP8.9□□□□□ -0.98
RNF41-204ENST00000548120 ZNF652Q9Y2D9 606 aa8.9□□□□□ -0.98
RNF41-204ENST00000548120 ABCC12Q96J65 1359 aa8.89□□□□□ -0.99
RNF41-204ENST00000548120 PPEF1O14829 653 aaPredicted RBP8.89□□□□□ -0.99
RNF41-204ENST00000548120 MAP3K13O43283 966 aa8.89□□□□□ -0.99
RNF41-204ENST00000548120 RAD17O75943 681 aa8.89□□□□□ -0.99
RNF41-204ENST00000548120 MICALL2Q8IY33 904 aa8.89□□□□□ -0.99
RNF41-204ENST00000548120 RPGRQ92834 1020 aaKnown RBP8.89□□□□□ -0.99
RNF41-204ENST00000548120 ZNRF3Q9ULT6 936 aa8.89□□□□□ -0.99
RNF41-204ENST00000548120 GPR25O00155 361 aa8.88□□□□□ -0.99
RNF41-204ENST00000548120 TEX13AQ9BXU3 409 aaPredicted RBP8.88□□□□□ -0.99
RNF41-204ENST00000548120 CNOT7Q9UIV1 285 aaKnown RBP8.88□□□□□ -0.99
RNF41-204ENST00000548120 TRPC6Q9Y210 931 aa8.88□□□□□ -0.99
RNF41-204ENST00000548120 KNSTRNQ9Y448 316 aa8.88□□□□□ -0.99
RNF41-204ENST00000548120 UBR2Q8IWV8 1755 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 H7C1D1 291 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 SEC24BO95487 1268 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 EN2P19622 333 aaPredicted RBP8.87□□□□□ -0.99
RNF41-204ENST00000548120 CRY2Q49AN0 593 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 TBC1D10BQ4KMP7 808 aaPredicted RBP8.87□□□□□ -0.99
RNF41-204ENST00000548120 CLEC4GQ6UXB4 293 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 SAMD7Q7Z3H4 446 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 NUTM1Q86Y26 1132 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 CUL9Q8IWT3 2517 aa8.87□□□□□ -0.99
RNF41-204ENST00000548120 H0YGN5 161 aa8.86□□□□□ -0.99
RNF41-204ENST00000548120 FKTNO75072 461 aa8.86□□□□□ -0.99
RNF41-204ENST00000548120 EGFRP00533 1210 aa8.86□□□□□ -0.99
RNF41-204ENST00000548120 PPP2R1AP30153 589 aa8.86□□□□□ -0.99
RNF41-204ENST00000548120 GRIPAP1Q4V328 841 aa8.86□□□□□ -0.99
RNF41-204ENST00000548120 INTS3Q68E01 1043 aaKnown RBP8.86□□□□□ -0.99
RNF41-204ENST00000548120 ZNF790Q6PG37 636 aa8.86□□□□□ -0.99
RNF41-204ENST00000548120 RASEFQ8IZ41 740 aa8.86□□□□□ -0.99
RNF41-204ENST00000548120 DCPSQ96C86 337 aaKnown RBP8.86□□□□□ -0.99
RNF41-204ENST00000548120 NEFLP07196 543 aa8.85□□□□□ -0.99
RNF41-204ENST00000548120 TNIP1Q15025 636 aa8.85□□□□□ -0.99
RNF41-204ENST00000548120 MTHFSDQ2M296 383 aaKnown RBP8.85□□□□□ -0.99
RNF41-204ENST00000548120 RBM26Q5T8P6 1007 aaKnown RBP8.85□□□□□ -0.99
RNF41-204ENST00000548120 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
RNF41-204ENST00000548120 CDCA5Q96FF9 252 aa8.85□□□□□ -0.99
RNF41-204ENST00000548120 FMNL2Q96PY5 1086 aa8.85□□□□□ -0.99
RNF41-204ENST00000548120 TMX4Q9H1E5 349 aaPredicted RBP8.85□□□□□ -0.99
RNF41-204ENST00000548120 TRIM17Q9Y577 477 aa8.85□□□□□ -0.99
RNF41-204ENST00000548120 RIC1Q4ADV7 1423 aa8.85□□□□□ -0.99
RNF41-204ENST00000548120 HMOX1P09601 288 aa8.84□□□□□ -0.99
RNF41-204ENST00000548120 TEFQ10587 303 aa8.84□□□□□ -0.99
RNF41-204ENST00000548120 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
RNF41-204ENST00000548120 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
RNF41-204ENST00000548120 SUPT20HQ8NEM7 779 aa8.84□□□□□ -0.99
RNF41-204ENST00000548120 RBM17Q96I25 401 aaKnown RBP8.84□□□□□ -0.99
RNF41-204ENST00000548120 GGA3Q9NZ52 723 aa8.84□□□□□ -0.99
RNF41-204ENST00000548120 RBM27Q9P2N5 1060 aaKnown RBP8.84□□□□□ -0.99
RNF41-204ENST00000548120 HTTP42858 3142 aa8.84□□□□□ -0.99
RNF41-204ENST00000548120 A0A0C4DFX4 3053 aa8.84□□□□□ -0.99
RNF41-204ENST00000548120 BRCA2P51587 3418 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms