RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ZSWIM4Q9H7M6 989 aa14.08□□□□□ -0.15
NPC1L1-204ENST00000546276 SNRKQ9NRH2 765 aa14.08□□□□□ -0.15
NPC1L1-204ENST00000546276 OGFRQ9NZT2 677 aa14.08□□□□□ -0.15
NPC1L1-204ENST00000546276 SAMD9Q5K651 1589 aa14.08□□□□□ -0.15
NPC1L1-204ENST00000546276 MYRIPQ8NFW9 859 aa14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 USO1O60763 962 aaKnown RBP14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 KSR2Q6VAB6 950 aa14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 NPATQ14207 1427 aa14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 RAD50Q92878 1312 aa14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 ATP5J2-PTCD1G3V325 749 aa14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 PPP1R9BQ96SB3 815 aa14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.16
NPC1L1-204ENST00000546276 PAFAH1B1P43034 410 aa14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 RTL1A6NKG5 1358 aa14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 ABCC1P33527 1531 aa14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 CCDC144CPQ8IYA2 1237 aa14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 TTF1Q15361 905 aaPredicted RBP14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 CWC25Q9NXE8 425 aaPredicted RBP14.07□□□□□ -0.16
NPC1L1-204ENST00000546276 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 MAGI3Q5TCQ9 1506 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 FSD2A1L4K1 749 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 ANKRD13DQ6ZTN6 518 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 POGZQ7Z3K3 1410 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 SLC26A6Q9BXS9 759 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 RIMS2Q9UQ26 1411 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 KDM5CP41229 1560 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 SPTLC2O15270 562 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 CACNA2D4Q7Z3S7 1137 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 ALG1Q9BT22 464 aa14.06□□□□□ -0.16
NPC1L1-204ENST00000546276 AOX1Q06278 1338 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 PTPRTO14522 1441 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 CPA1P15085 419 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 CTR9Q6PD62 1173 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 ANKRD18BA2A2Z9 1011 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 ZFYP08048 801 aaPredicted RBP14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 TAX1BP1Q86VP1 789 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 FOXO3O43524 673 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 SLC5A1P13866 664 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 JARID2Q92833 1246 aaPredicted RBP14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 ZNF521Q96K83 1311 aa14.05□□□□□ -0.16
NPC1L1-204ENST00000546276 BRD1O95696 1058 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 G2E3Q7L622 706 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 LINS1Q8NG48 757 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 DISP1Q96F81 1524 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 RIOK3O14730 519 aaKnown RBP14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 N4BP3O15049 544 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 CATIPQ7Z7H3 387 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 FLT4P35916 1363 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 NLRP5P59047 1200 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 ANKRD24Q8TF21 1146 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 PTPDC1A2A3K4 754 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 ZNF500O60304 480 aaPredicted RBP14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 SNRPA1P09661 255 aaKnown RBP14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 TSG101Q99816 390 aa14.04□□□□□ -0.16
NPC1L1-204ENST00000546276 MARCKSP29966 332 aaPredicted RBP14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 IL13P35225 146 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 IFNKQ9P0W0 207 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 CCDC194A0A1B0GVG4 234 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 CTAGE15A4D2H0 777 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 CTAGE8P0CG41 777 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 ATL3Q6DD88 541 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 CTAGE6Q86UF2 777 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 GAS2L3Q86XJ1 694 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 CTAGE4Q8IX94 777 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 EHBP1Q8NDI1 1231 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 CTAGE1Q96RT6 745 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 ZBTB43O43298 467 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 SYT10Q6XYQ8 523 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 C17orf53Q8N3J3 647 aaPredicted RBP14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 ALS2CR12Q96Q35 445 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 SEPT11Q9NVA2 429 aaKnown RBP14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 ZNF518AQ6AHZ1 1483 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 SGSM2O43147 1006 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 MTIF2P46199 727 aaKnown RBP14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 MICALCLQ6ZW33 695 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 IFNL2Q8IZJ0 200 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 ERO1AQ96HE7 468 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 TMOD3Q9NYL9 352 aa14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.03□□□□□ -0.16
NPC1L1-204ENST00000546276 IGSF3O75054 1194 aa14.02□□□□□ -0.16
NPC1L1-204ENST00000546276 HSP90AA4PQ58FG1 418 aa14.02□□□□□ -0.16
NPC1L1-204ENST00000546276 MFSD6Q6ZSS7 791 aa14.02□□□□□ -0.16
NPC1L1-204ENST00000546276 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
NPC1L1-204ENST00000546276 GSPT1P15170 499 aaKnown RBP14.02□□□□□ -0.16
NPC1L1-204ENST00000546276 LDHAL6AQ6ZMR3 332 aa14.02□□□□□ -0.16
NPC1L1-204ENST00000546276 DHX32Q7L7V1 743 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms