RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 ATP5J2-PTCD1G3V325 749 aa35.74■■■■□ 3.31
PDCD2-211ENST00000544336 VPS33BQ9H267 617 aa35.74■■■■□ 3.31
PDCD2-211ENST00000544336 MBIPQ9NS73 344 aa35.74■■■■□ 3.31
PDCD2-211ENST00000544336 ZNRF3Q9ULT6 936 aa35.74■■■■□ 3.31
PDCD2-211ENST00000544336 FMR1Q06787 632 aaKnown RBP eCLIP35.72■■■■□ 3.319e-6■■■■□ 20.6
PDCD2-211ENST00000544336 CXCL9Q07325 125 aa35.72■■■■□ 3.31
PDCD2-211ENST00000544336 FAM89AQ96GI7 184 aa35.72■■■■□ 3.31
PDCD2-211ENST00000544336 ABT1Q9ULW3 272 aaKnown RBP35.72■■■■□ 3.31
PDCD2-211ENST00000544336 FOXN1O15353 648 aa35.71■■■■□ 3.31
PDCD2-211ENST00000544336 USP50Q70EL3 339 aaPredicted RBP35.71■■■■□ 3.31
PDCD2-211ENST00000544336 ISCA1Q9BUE6 129 aa35.71■■■■□ 3.31
PDCD2-211ENST00000544336 HYPKQ9NX55 129 aa35.71■■■■□ 3.31
PDCD2-211ENST00000544336 DEFB115Q30KQ5 88 aa35.7■■■■□ 3.31
PDCD2-211ENST00000544336 RTL5Q5HYW3 569 aaPredicted RBP35.7■■■■□ 3.31
PDCD2-211ENST00000544336 APAF1O14727 1248 aa35.69■■■■□ 3.3
PDCD2-211ENST00000544336 KIAA2012Q0VF49 1180 aa35.69■■■■□ 3.3
PDCD2-211ENST00000544336 GPRC5DQ9NZD1 345 aa35.69■■■■□ 3.3
PDCD2-211ENST00000544336 LRRC37AA6NMS7 1700 aa35.68■■■■□ 3.3
PDCD2-211ENST00000544336 RASSF10A6NK89 507 aa35.67■■■■□ 3.3
PDCD2-211ENST00000544336 RAD17O75943 681 aa35.67■■■■□ 3.3
PDCD2-211ENST00000544336 GMPSP49915 693 aaPredicted RBP35.67■■■■□ 3.3
PDCD2-211ENST00000544336 AIDAQ96BJ3 306 aa35.67■■■■□ 3.3
PDCD2-211ENST00000544336 ADARB2Q9NS39 739 aaKnown RBP35.67■■■■□ 3.3
PDCD2-211ENST00000544336 DUOX1Q9NRD9 1551 aa35.67■■■■□ 3.3
PDCD2-211ENST00000544336 CIAPIN1Q6FI81 312 aa35.66■■■■□ 3.3
PDCD2-211ENST00000544336 TRPM7Q96QT4 1865 aa35.65■■■■□ 3.3
PDCD2-211ENST00000544336 TRAF5O00463 557 aa35.65■■■■□ 3.3
PDCD2-211ENST00000544336 ELL2O00472 640 aaPredicted RBP35.65■■■■□ 3.3
PDCD2-211ENST00000544336 ZNF853P0CG23 659 aa35.65■■■■□ 3.3
PDCD2-211ENST00000544336 TMC4Q7Z404 712 aa35.64■■■■□ 3.3
PDCD2-211ENST00000544336 CELF1Q92879 486 aaKnown RBP35.64■■■■□ 3.3
PDCD2-211ENST00000544336 BCL2L13Q9BXK5 485 aa35.64■■■■□ 3.3
PDCD2-211ENST00000544336 COL4A1P02462 1669 aa35.64■■■■□ 3.3
PDCD2-211ENST00000544336 RIC3Q7Z5B4 369 aa35.63■■■■□ 3.29
PDCD2-211ENST00000544336 IFT57Q9NWB7 429 aa35.63■■■■□ 3.29
PDCD2-211ENST00000544336 SF3B3Q15393 1217 aaKnown RBP35.62■■■■□ 3.29
PDCD2-211ENST00000544336 PHAXQ9H814 394 aaKnown RBP35.62■■■■□ 3.29
PDCD2-211ENST00000544336 WDR33Q9C0J8 1336 aaKnown RBP35.61■■■■□ 3.29
PDCD2-211ENST00000544336 GNAI1P63096 354 aa35.61■■■■□ 3.29
PDCD2-211ENST00000544336 GOLGA2Q08379 1002 aa35.61■■■■□ 3.29
PDCD2-211ENST00000544336 TNIP1Q15025 636 aa35.61■■■■□ 3.29
PDCD2-211ENST00000544336 PAXIP1Q6ZW49 1069 aaPredicted RBP35.61■■■■□ 3.29
PDCD2-211ENST00000544336 YDJCA8MPS7 323 aa35.6■■■■□ 3.29
PDCD2-211ENST00000544336 IRS4O14654 1257 aaPredicted RBP35.6■■■■□ 3.29
PDCD2-211ENST00000544336 NSFL1CQ9UNZ2 370 aaKnown RBP35.6■■■■□ 3.29
PDCD2-211ENST00000544336 CALD1Q05682 793 aaKnown RBP35.59■■■■□ 3.29
PDCD2-211ENST00000544336 WBP1LQ9NX94 342 aa35.59■■■■□ 3.29
PDCD2-211ENST00000544336 CTCFP49711 727 aaPredicted RBP35.58■■■■□ 3.29
PDCD2-211ENST00000544336 GRM1Q13255 1194 aa35.58■■■■□ 3.29
PDCD2-211ENST00000544336 RIMBP2O15034 1052 aa35.57■■■■□ 3.28
PDCD2-211ENST00000544336 TRIM28Q13263 835 aaKnown RBP35.57■■■■□ 3.28
PDCD2-211ENST00000544336 WASHC4Q2M389 1173 aa35.57■■■■□ 3.28
PDCD2-211ENST00000544336 CST9Q5W186 159 aa35.57■■■■□ 3.28
PDCD2-211ENST00000544336 MYD88Q99836 296 aa35.57■■■■□ 3.28
PDCD2-211ENST00000544336 C6orf229H3BNL8 230 aa35.56■■■■□ 3.28
PDCD2-211ENST00000544336 DBNDD1Q9H9R9 158 aa35.56■■■■□ 3.28
PDCD2-211ENST00000544336 CDHR2Q9BYE9 1310 aa35.56■■■■□ 3.28
PDCD2-211ENST00000544336 SHTN1A0MZ66 631 aa35.55■■■■□ 3.28
PDCD2-211ENST00000544336 GPSM2P81274 684 aa35.55■■■■□ 3.28
PDCD2-211ENST00000544336 C8orf58Q8NAV2 365 aa35.55■■■■□ 3.28
PDCD2-211ENST00000544336 GLIS2Q9BZE0 524 aaPredicted RBP35.54■■■■□ 3.28
PDCD2-211ENST00000544336 PRDM10Q9NQV6 1147 aa35.54■■■■□ 3.28
PDCD2-211ENST00000544336 CYP4F22Q6NT55 531 aa35.53■■■■□ 3.28
PDCD2-211ENST00000544336 ZBTB38Q8NAP3 1195 aaPredicted RBP35.53■■■■□ 3.28
PDCD2-211ENST00000544336 TRPM4Q8TD43 1214 aa35.53■■■■□ 3.28
PDCD2-211ENST00000544336 CAPNS2Q96L46 248 aa35.53■■■■□ 3.28
PDCD2-211ENST00000544336 POLLQ9UGP5 575 aa35.53■■■■□ 3.28
PDCD2-211ENST00000544336 CNOT7Q9UIV1 285 aaKnown RBP35.53■■■■□ 3.28
PDCD2-211ENST00000544336 ZBTB12Q9Y330 459 aaPredicted RBP35.53■■■■□ 3.28
PDCD2-211ENST00000544336 LBX1P52954 281 aa35.52■■■■□ 3.28
PDCD2-211ENST00000544336 HIRAP54198 1017 aaPredicted RBP35.52■■■■□ 3.28
PDCD2-211ENST00000544336 GPR101Q96P66 508 aaPredicted RBP35.52■■■■□ 3.28
PDCD2-211ENST00000544336 RPS8P62241 208 aaKnown RBP35.51■■■■□ 3.28
PDCD2-211ENST00000544336 JARID2Q92833 1246 aaPredicted RBP35.51■■■■□ 3.28
PDCD2-211ENST00000544336 PSMD14O00487 310 aa35.5■■■■□ 3.27
PDCD2-211ENST00000544336 CELF2O95319 508 aaKnown RBP35.5■■■■□ 3.27
PDCD2-211ENST00000544336 MAP2K1Q02750 393 aaPredicted RBP35.5■■■■□ 3.27
PDCD2-211ENST00000544336 MICALL2Q8IY33 904 aa35.5■■■■□ 3.27
PDCD2-211ENST00000544336 SEC31BQ9NQW1 1179 aa35.5■■■■□ 3.27
PDCD2-211ENST00000544336 TLL2Q9Y6L7 1015 aa35.5■■■■□ 3.27
PDCD2-211ENST00000544336 H7C1D1 291 aa35.49■■■■□ 3.27
PDCD2-211ENST00000544336 ECE1P42892 770 aa35.49■■■■□ 3.27
PDCD2-211ENST00000544336 DOK7Q18PE1 504 aa35.49■■■■□ 3.27
PDCD2-211ENST00000544336 THSD7BQ9C0I4 1608 aa35.49■■■■□ 3.27
PDCD2-211ENST00000544336 ZNF408Q9H9D4 720 aa35.48■■■■□ 3.27
PDCD2-211ENST00000544336 PGAP2Q9UHJ9 254 aa35.48■■■■□ 3.27
PDCD2-211ENST00000544336 ECE2O60344 883 aa35.47■■■■□ 3.27
PDCD2-211ENST00000544336 TBC1D16Q8TBP0 767 aa35.47■■■■□ 3.27
PDCD2-211ENST00000544336 CCDC85AQ96PX6 553 aaPredicted RBP35.47■■■■□ 3.27
PDCD2-211ENST00000544336 EYA3Q99504 573 aa35.47■■■■□ 3.27
PDCD2-211ENST00000544336 HSPA8P11142 646 aaKnown RBP35.46■■■■□ 3.27
PDCD2-211ENST00000544336 CCDC30Q5VVM6 783 aa35.46■■■■□ 3.27
PDCD2-211ENST00000544336 TSPYL6Q8N831 410 aa35.46■■■■□ 3.27
PDCD2-211ENST00000544336 CCDC191Q8NCU4 936 aa35.46■■■■□ 3.27
PDCD2-211ENST00000544336 ZC3H15Q8WU90 426 aaKnown RBP35.46■■■■□ 3.27
PDCD2-211ENST00000544336 KCNQ5Q9NR82 932 aa35.46■■■■□ 3.27
PDCD2-211ENST00000544336 CWC25Q9NXE8 425 aaPredicted RBP35.46■■■■□ 3.27
PDCD2-211ENST00000544336 PCCAP05165 728 aaPredicted RBP35.45■■■■□ 3.27
PDCD2-211ENST00000544336 HSP90B1P14625 803 aaKnown RBP35.45■■■■□ 3.27
PDCD2-211ENST00000544336 CCDC184Q52MB2 194 aa35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms