RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CTR9Q6PD62 1173 aa22.34■■□□□ 1.17
SUDS3-204ENST00000543473 CCDC82Q8N4S0 544 aa22.34■■□□□ 1.17
SUDS3-204ENST00000543473 C19orf44Q9H6X5 657 aa22.33■■□□□ 1.17
SUDS3-204ENST00000543473 ZNF500O60304 480 aaPredicted RBP22.33■■□□□ 1.17
SUDS3-204ENST00000543473 OTUD7AQ8TE49 926 aaPredicted RBP22.33■■□□□ 1.16
SUDS3-204ENST00000543473 GNL3LQ9NVN8 582 aaKnown RBP22.33■■□□□ 1.16
SUDS3-204ENST00000543473 PAFAH1B1P43034 410 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 SYKP43405 635 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 CCDC196A0A1B0GTZ2 297 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 BICDL1Q6ZP65 573 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 NGLY1Q96IV0 654 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 NPC1L1Q9UHC9 1359 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 LRRC2Q9BYS8 371 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 ZHX3Q9H4I2 956 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 SPATA31E1Q6ZUB1 1445 aa22.32■■□□□ 1.16
SUDS3-204ENST00000543473 EXOC5O00471 708 aa22.31■■□□□ 1.16
SUDS3-204ENST00000543473 ARHGEF5Q12774 1597 aa22.31■■□□□ 1.16
SUDS3-204ENST00000543473 CFAP65Q6ZU64 1925 aaKnown RBP22.31■■□□□ 1.16
SUDS3-204ENST00000543473 IBSPP21815 317 aaPredicted RBP22.31■■□□□ 1.16
SUDS3-204ENST00000543473 KCNG4Q8TDN1 519 aa22.31■■□□□ 1.16
SUDS3-204ENST00000543473 AKAP2Q9Y2D5 859 aa22.31■■□□□ 1.16
SUDS3-204ENST00000543473 MAP3K2Q9Y2U5 619 aa22.31■■□□□ 1.16
SUDS3-204ENST00000543473 IVLP07476 585 aa22.31■■□□□ 1.16
SUDS3-204ENST00000543473 SYT10Q6XYQ8 523 aa22.31■■□□□ 1.16
SUDS3-204ENST00000543473 LMOD1P29536 600 aaPredicted RBP22.3■■□□□ 1.16
SUDS3-204ENST00000543473 GPATCH11Q8N954 259 aa22.3■■□□□ 1.16
SUDS3-204ENST00000543473 HYPKQ9NX55 129 aa22.3■■□□□ 1.16
SUDS3-204ENST00000543473 GOLIM4O00461 696 aa22.3■■□□□ 1.16
SUDS3-204ENST00000543473 YEATS2Q9ULM3 1422 aa22.3■■□□□ 1.16
SUDS3-204ENST00000543473 SYCP1Q15431 976 aa22.3■■□□□ 1.16
SUDS3-204ENST00000543473 LIG1P18858 919 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 RNF187Q5TA31 235 aaPredicted RBP22.29■■□□□ 1.16
SUDS3-204ENST00000543473 CABLES1Q8TDN4 633 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 ERO1AQ96HE7 468 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 ANXA1P04083 346 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 MICALCLQ6ZW33 695 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 SLC12A7Q9Y666 1083 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 GOLGA8AA7E2F4 631 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 USO1O60763 962 aaKnown RBP22.29■■□□□ 1.16
SUDS3-204ENST00000543473 SOGA3Q5TF21 947 aa22.29■■□□□ 1.16
SUDS3-204ENST00000543473 IARSP41252 1262 aaKnown RBP22.28■■□□□ 1.16
SUDS3-204ENST00000543473 FKBP15Q5T1M5 1219 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 PHACTR3Q96KR7 559 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 RSPH14Q9UHP6 348 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 HSP90AA4PQ58FG1 418 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 IPO4Q8TEX9 1081 aaKnown RBP22.28■■□□□ 1.16
SUDS3-204ENST00000543473 NAPBQ9H115 298 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 KRT24Q2M2I5 525 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 BMP2KQ9NSY1 1161 aaPredicted RBP22.28■■□□□ 1.16
SUDS3-204ENST00000543473 SSBP05455 408 aaKnown RBP eCLIP22.28■■□□□ 1.16
SUDS3-204ENST00000543473 METTL24Q5JXM2 366 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 TSC1Q92574 1164 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 MYO5CQ9NQX4 1742 aa22.28■■□□□ 1.16
SUDS3-204ENST00000543473 FLT4P35916 1363 aa22.27■■□□□ 1.16
SUDS3-204ENST00000543473 CAPN2P17655 700 aa22.27■■□□□ 1.16
SUDS3-204ENST00000543473 HAND2P61296 217 aa22.27■■□□□ 1.16
SUDS3-204ENST00000543473 SSRP1Q08945 709 aaKnown RBP22.27■■□□□ 1.16
SUDS3-204ENST00000543473 RAB11FIP4Q86YS3 637 aa22.27■■□□□ 1.16
SUDS3-204ENST00000543473 GTF3C6Q969F1 213 aa22.27■■□□□ 1.16
SUDS3-204ENST00000543473 PHAXQ9H814 394 aaKnown RBP22.27■■□□□ 1.16
SUDS3-204ENST00000543473 LRP2BPQ9P2M1 347 aa22.27■■□□□ 1.16
SUDS3-204ENST00000543473 GADD45BO75293 160 aaPredicted RBP22.27■■□□□ 1.16
SUDS3-204ENST00000543473 LRRC59Q96AG4 307 aaKnown RBP22.27■■□□□ 1.16
SUDS3-204ENST00000543473 MNAT1P51948 309 aa22.26■■□□□ 1.15
SUDS3-204ENST00000543473 Q6ZUG5 572 aa22.26■■□□□ 1.15
SUDS3-204ENST00000543473 RNF216Q9NWF9 866 aaPredicted RBP22.26■■□□□ 1.15
SUDS3-204ENST00000543473 CTAGE15A4D2H0 777 aa22.26■■□□□ 1.15
SUDS3-204ENST00000543473 CTAGE8P0CG41 777 aa22.26■■□□□ 1.15
SUDS3-204ENST00000543473 CTAGE6Q86UF2 777 aa22.26■■□□□ 1.15
SUDS3-204ENST00000543473 CTAGE4Q8IX94 777 aa22.26■■□□□ 1.15
SUDS3-204ENST00000543473 A0A087WZG4 1122 aa22.26■■□□□ 1.15
SUDS3-204ENST00000543473 GABPB1Q06547 395 aaPredicted RBP22.26■■□□□ 1.15
SUDS3-204ENST00000543473 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.26■■□□□ 1.15
SUDS3-204ENST00000543473 IFIT3O14879 490 aaKnown RBP22.25■■□□□ 1.15
SUDS3-204ENST00000543473 GTF2A1P52655 376 aaPredicted RBP22.25■■□□□ 1.15
SUDS3-204ENST00000543473 IFNKQ9P0W0 207 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 NEFHP12036 1026 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 CPA1P15085 419 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 ZBTB3Q9H5J0 574 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 ANTXR1Q9H6X2 564 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 GCC2Q8IWJ2 1684 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 ENOX2Q16206 610 aaKnown RBP22.25■■□□□ 1.15
SUDS3-204ENST00000543473 KANK3Q6NY19 840 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 GOLGA1Q92805 767 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 GCP02774 474 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 MTHFSDQ2M296 383 aaKnown RBP22.25■■□□□ 1.15
SUDS3-204ENST00000543473 BCL2L12Q9HB09 334 aa22.25■■□□□ 1.15
SUDS3-204ENST00000543473 DNA2P51530 1060 aa22.24■■□□□ 1.15
SUDS3-204ENST00000543473 DDX46Q7L014 1031 aaKnown RBP22.24■■□□□ 1.15
SUDS3-204ENST00000543473 MICU3Q86XE3 530 aa22.24■■□□□ 1.15
SUDS3-204ENST00000543473 N4BP3O15049 544 aa22.24■■□□□ 1.15
SUDS3-204ENST00000543473 CACNA2D4Q7Z3S7 1137 aa22.24■■□□□ 1.15
SUDS3-204ENST00000543473 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
SUDS3-204ENST00000543473 CREB3L3Q68CJ9 461 aa22.24■■□□□ 1.15
SUDS3-204ENST00000543473 SAMD9LQ8IVG5 1584 aa22.24■■□□□ 1.15
SUDS3-204ENST00000543473 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
SUDS3-204ENST00000543473 SAMD1Q6SPF0 538 aaPredicted RBP22.23■■□□□ 1.15
SUDS3-204ENST00000543473 RUFY3Q7L099 469 aa22.23■■□□□ 1.15
SUDS3-204ENST00000543473 KLF18A0A0U1RQI7 1052 aa22.23■■□□□ 1.15
SUDS3-204ENST00000543473 NMIQ13287 307 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms