RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 BBOX1O75936 387 aa21.53■■□□□ 1.04
CD9-209ENST00000540891 CASP7P55210 303 aa21.53■■□□□ 1.04
CD9-209ENST00000540891 CELF1Q92879 486 aaKnown RBP21.53■■□□□ 1.04
CD9-209ENST00000540891 BCL2L13Q9BXK5 485 aa21.53■■□□□ 1.04
CD9-209ENST00000540891 GPBP1L1Q9HC44 474 aaPredicted RBP21.53■■□□□ 1.04
CD9-209ENST00000540891 ATP6V0A2Q9Y487 856 aa21.53■■□□□ 1.04
CD9-209ENST00000540891 ZC3H4Q9UPT8 1303 aaKnown RBP21.53■■□□□ 1.04
CD9-209ENST00000540891 ZNF277Q9NRM2 450 aaPredicted RBP21.52■■□□□ 1.04
CD9-209ENST00000540891 DICER1Q9UPY3 1922 aaKnown RBP21.51■■□□□ 1.03
CD9-209ENST00000540891 HSP90B1P14625 803 aaKnown RBP21.51■■□□□ 1.03
CD9-209ENST00000540891 ALDH1L2Q3SY69 923 aa21.51■■□□□ 1.03
CD9-209ENST00000540891 UBE3BQ7Z3V4 1068 aa21.51■■□□□ 1.03
CD9-209ENST00000540891 PSMD1Q99460 953 aa21.51■■□□□ 1.03
CD9-209ENST00000540891 CT47B1P0C2W7 299 aaPredicted RBP21.5■■□□□ 1.03
CD9-209ENST00000540891 SP8Q8IXZ3 490 aa21.5■■□□□ 1.03
CD9-209ENST00000540891 CCDC85AQ96PX6 553 aaPredicted RBP21.49■■□□□ 1.03
CD9-209ENST00000540891 SEC31BQ9NQW1 1179 aa21.49■■□□□ 1.03
CD9-209ENST00000540891 KIF3CO14782 793 aa21.48■■□□□ 1.03
CD9-209ENST00000540891 IARSP41252 1262 aaKnown RBP21.48■■□□□ 1.03
CD9-209ENST00000540891 CTSWP56202 376 aa21.48■■□□□ 1.03
CD9-209ENST00000540891 GRIPAP1Q4V328 841 aa21.48■■□□□ 1.03
CD9-209ENST00000540891 PLA2G12BQ9BX93 195 aa21.48■■□□□ 1.03
CD9-209ENST00000540891 NMRK2Q9NPI5 230 aa21.48■■□□□ 1.03
CD9-209ENST00000540891 LRRC37AA6NMS7 1700 aa21.48■■□□□ 1.03
CD9-209ENST00000540891 PTPRCP08575 1304 aa21.48■■□□□ 1.03
CD9-209ENST00000540891 COL4A5P29400 1685 aa21.47■■□□□ 1.03
CD9-209ENST00000540891 CCDC152Q4G0S7 254 aa21.47■■□□□ 1.03
CD9-209ENST00000540891 TTLL11Q8NHH1 800 aa21.47■■□□□ 1.03
CD9-209ENST00000540891 SMC4Q9NTJ3 1288 aa21.47■■□□□ 1.03
CD9-209ENST00000540891 GLTPD2A6NH11 291 aa21.46■■□□□ 1.03
CD9-209ENST00000540891 RPS8P62241 208 aaKnown RBP21.46■■□□□ 1.03
CD9-209ENST00000540891 SLC4A10Q6U841 1118 aa21.46■■□□□ 1.03
CD9-209ENST00000540891 TMC4Q7Z404 712 aa21.46■■□□□ 1.03
CD9-209ENST00000540891 RTFDC1Q9BY42 306 aaPredicted RBP21.46■■□□□ 1.03
CD9-209ENST00000540891 DUOX1Q9NRD9 1551 aa21.45■■□□□ 1.02
CD9-209ENST00000540891 ALDH1L1O75891 902 aa21.45■■□□□ 1.02
CD9-209ENST00000540891 RARSP54136 660 aaKnown RBP21.45■■□□□ 1.02
CD9-209ENST00000540891 GREM2Q9H772 168 aa21.45■■□□□ 1.02
CD9-209ENST00000540891 ZBED9Q6R2W3 1325 aa21.45■■□□□ 1.02
CD9-209ENST00000540891 BRPF1P55201 1214 aaPredicted RBP21.44■■□□□ 1.02
CD9-209ENST00000540891 MPNDQ8N594 471 aa21.44■■□□□ 1.02
CD9-209ENST00000540891 SRCIN1Q9C0H9 1055 aa21.44■■□□□ 1.02
CD9-209ENST00000540891 TMX4Q9H1E5 349 aaPredicted RBP21.44■■□□□ 1.02
CD9-209ENST00000540891 KDM2BQ8NHM5 1336 aa21.44■■□□□ 1.02
CD9-209ENST00000540891 RTL9Q8NET4 1388 aa21.44■■□□□ 1.02
CD9-209ENST00000540891 MYH3P11055 1940 aa21.43■■□□□ 1.02
CD9-209ENST00000540891 GRM8O00222 908 aa21.43■■□□□ 1.02
CD9-209ENST00000540891 DPP8Q6V1X1 898 aaPredicted RBP21.43■■□□□ 1.02
CD9-209ENST00000540891 CSF1RP07333 972 aa21.42■■□□□ 1.02
CD9-209ENST00000540891 LTBP1Q14766 1721 aa21.42■■□□□ 1.02
CD9-209ENST00000540891 ZNF541Q9H0D2 1346 aa21.41■■□□□ 1.02
CD9-209ENST00000540891 FZD9O00144 591 aa21.41■■□□□ 1.02
CD9-209ENST00000540891 GPSM2P81274 684 aa21.41■■□□□ 1.02
CD9-209ENST00000540891 FOXO4P98177 505 aa21.41■■□□□ 1.02
CD9-209ENST00000540891 RRAGCQ9HB90 399 aa21.41■■□□□ 1.02
CD9-209ENST00000540891 NOB1Q9ULX3 412 aaKnown RBP21.41■■□□□ 1.02
CD9-209ENST00000540891 POTECB2RU33 542 aa21.4■■□□□ 1.02
CD9-209ENST00000540891 DDNO94850 711 aaPredicted RBP21.4■■□□□ 1.02
CD9-209ENST00000540891 AOC3Q16853 763 aa21.4■■□□□ 1.02
CD9-209ENST00000540891 FAM161AQ3B820 660 aa21.4■■□□□ 1.02
CD9-209ENST00000540891 EPHA10Q5JZY3 1008 aa21.4■■□□□ 1.02
CD9-209ENST00000540891 ANKRD18AQ8IVF6 992 aa21.4■■□□□ 1.02
CD9-209ENST00000540891 LARGE2Q8N3Y3 721 aa21.4■■□□□ 1.02
CD9-209ENST00000540891 SUPT20HQ8NEM7 779 aa21.4■■□□□ 1.02
CD9-209ENST00000540891 UTYO14607 1347 aa21.39■■□□□ 1.01
CD9-209ENST00000540891 WDR90Q96KV7 1748 aa21.39■■□□□ 1.01
CD9-209ENST00000540891 PPIP5K2O43314 1243 aa21.39■■□□□ 1.01
CD9-209ENST00000540891 C1QTNF8P60827 252 aa21.39■■□□□ 1.01
CD9-209ENST00000540891 DPY19L2Q6NUT2 758 aa21.39■■□□□ 1.01
CD9-209ENST00000540891 VPS33BQ9H267 617 aa21.39■■□□□ 1.01
CD9-209ENST00000540891 C9orf78Q9NZ63 289 aaPredicted RBP21.39■■□□□ 1.01
CD9-209ENST00000540891 NSFL1CQ9UNZ2 370 aaKnown RBP21.39■■□□□ 1.01
CD9-209ENST00000540891 NBPF7P0C2Y1 421 aaPredicted RBP21.38■■□□□ 1.01
CD9-209ENST00000540891 KIAA2012Q0VF49 1180 aa21.38■■□□□ 1.01
CD9-209ENST00000540891 JDP2Q8WYK2 163 aa21.38■■□□□ 1.01
CD9-209ENST00000540891 KAZALD1Q96I82 304 aa21.38■■□□□ 1.01
CD9-209ENST00000540891 CDC5LQ99459 802 aaKnown RBP21.38■■□□□ 1.01
CD9-209ENST00000540891 POLLQ9UGP5 575 aa21.38■■□□□ 1.01
CD9-209ENST00000540891 ITGA6P23229 1130 aa21.37■■□□□ 1.01
CD9-209ENST00000540891 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
CD9-209ENST00000540891 PODXL2Q9NZ53 605 aa21.37■■□□□ 1.01
CD9-209ENST00000540891 TBC1D16Q8TBP0 767 aa21.36■■□□□ 1.01
CD9-209ENST00000540891 BCAR3O75815 825 aa21.35■■□□□ 1.01
CD9-209ENST00000540891 LMBR1LQ6UX01 489 aa21.35■■□□□ 1.01
CD9-209ENST00000540891 NIM1KQ8IY84 436 aa21.35■■□□□ 1.01
CD9-209ENST00000540891 API5Q9BZZ5 524 aaKnown RBP21.35■■□□□ 1.01
CD9-209ENST00000540891 USP44Q9H0E7 712 aa21.35■■□□□ 1.01
CD9-209ENST00000540891 BSDC1Q9NW68 430 aaPredicted RBP21.35■■□□□ 1.01
CD9-209ENST00000540891 KIF16BQ96L93 1317 aa21.34■■□□□ 1.01
CD9-209ENST00000540891 L3MBTL3Q96JM7 780 aaPredicted RBP21.34■■□□□ 1.01
CD9-209ENST00000540891 GPR101Q96P66 508 aaPredicted RBP21.34■■□□□ 1.01
CD9-209ENST00000540891 MINPP1Q9UNW1 487 aa21.34■■□□□ 1.01
CD9-209ENST00000540891 SPEF2Q9C093 1822 aa21.34■■□□□ 1.01
CD9-209ENST00000540891 C6orf229H3BNL8 230 aa21.33■■□□□ 1.01
CD9-209ENST00000540891 TOMM70O94826 608 aa21.33■■□□□ 1.01
CD9-209ENST00000540891 VEGFAP15692 232 aaPredicted RBP21.33■■□□□ 1.01
CD9-209ENST00000540891 ARHGAP45Q92619 1136 aa21.33■■□□□ 1.01
CD9-209ENST00000540891 ANKRD18BA2A2Z9 1011 aa21.32■■□□□ 1
CD9-209ENST00000540891 IGHMBP2P38935 993 aaKnown RBP21.32■■□□□ 1
CD9-209ENST00000540891 EIF6P56537 245 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms