RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SCNN1DP51172 638 aa11.21□□□□□ -0.61
DDB1-212ENST00000538470 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
DDB1-212ENST00000538470 TRIM28Q13263 835 aaKnown RBP11.21□□□□□ -0.61
DDB1-212ENST00000538470 AOC3Q16853 763 aa11.21□□□□□ -0.61
DDB1-212ENST00000538470 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
DDB1-212ENST00000538470 ANKRD13DQ6ZTN6 518 aa11.21□□□□□ -0.61
DDB1-212ENST00000538470 PSME4Q14997 1843 aa11.21□□□□□ -0.62
DDB1-212ENST00000538470 APAF1O14727 1248 aa11.2□□□□□ -0.62
DDB1-212ENST00000538470 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
DDB1-212ENST00000538470 HSP90B1P14625 803 aaKnown RBP11.2□□□□□ -0.62
DDB1-212ENST00000538470 KIAA2012Q0VF49 1180 aa11.2□□□□□ -0.62
DDB1-212ENST00000538470 USP50Q70EL3 339 aaPredicted RBP11.2□□□□□ -0.62
DDB1-212ENST00000538470 SLC51AQ86UW1 340 aa11.2□□□□□ -0.62
DDB1-212ENST00000538470 MPNDQ8N594 471 aa11.2□□□□□ -0.62
DDB1-212ENST00000538470 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
DDB1-212ENST00000538470 ZNRF3Q9ULT6 936 aa11.2□□□□□ -0.62
DDB1-212ENST00000538470 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
DDB1-212ENST00000538470 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
DDB1-212ENST00000538470 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
DDB1-212ENST00000538470 CNTROBQ8N137 903 aa11.19□□□□□ -0.62
DDB1-212ENST00000538470 COL4A1P02462 1669 aa11.18□□□□□ -0.62
DDB1-212ENST00000538470 MAP1SQ66K74 1059 aaPredicted RBP11.18□□□□□ -0.62
DDB1-212ENST00000538470 RIC3Q7Z5B4 369 aa11.18□□□□□ -0.62
DDB1-212ENST00000538470 ADARB2Q9NS39 739 aaKnown RBP11.18□□□□□ -0.62
DDB1-212ENST00000538470 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
DDB1-212ENST00000538470 SPEF2Q9C093 1822 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 RASSF10A6NK89 507 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 EPS15P42566 896 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 TNIP1Q15025 636 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
DDB1-212ENST00000538470 CCDC30Q5VVM6 783 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 CIAPIN1Q6FI81 312 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 ZBTB38Q8NAP3 1195 aaPredicted RBP11.17□□□□□ -0.62
DDB1-212ENST00000538470 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
DDB1-212ENST00000538470 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
DDB1-212ENST00000538470 DDX58O95786 925 aaKnown RBP11.16□□□□□ -0.62
DDB1-212ENST00000538470 CXCL9Q07325 125 aa11.16□□□□□ -0.62
DDB1-212ENST00000538470 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
DDB1-212ENST00000538470 CCDC191Q8NCU4 936 aa11.16□□□□□ -0.62
DDB1-212ENST00000538470 PCCAP05165 728 aaPredicted RBP11.15□□□□□ -0.62
DDB1-212ENST00000538470 VEGFBP49765 207 aa11.15□□□□□ -0.62
DDB1-212ENST00000538470 GMPSP49915 693 aaPredicted RBP11.15□□□□□ -0.62
DDB1-212ENST00000538470 TNS4Q8IZW8 715 aa11.15□□□□□ -0.62
DDB1-212ENST00000538470 CELF1Q92879 486 aaKnown RBP11.15□□□□□ -0.62
DDB1-212ENST00000538470 EYA3Q99504 573 aa11.15□□□□□ -0.62
DDB1-212ENST00000538470 PHAXQ9H814 394 aaKnown RBP11.15□□□□□ -0.62
DDB1-212ENST00000538470 CWC25Q9NXE8 425 aaPredicted RBP11.15□□□□□ -0.62
DDB1-212ENST00000538470 SCN9AQ15858 1988 aa11.15□□□□□ -0.62
DDB1-212ENST00000538470 ZNF609O15014 1411 aa11.15□□□□□ -0.62
DDB1-212ENST00000538470 IL16Q14005 1332 aa11.14□□□□□ -0.63
DDB1-212ENST00000538470 WASHC4Q2M389 1173 aa11.14□□□□□ -0.63
DDB1-212ENST00000538470 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
DDB1-212ENST00000538470 C8orf58Q8NAV2 365 aa11.14□□□□□ -0.63
DDB1-212ENST00000538470 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
DDB1-212ENST00000538470 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
DDB1-212ENST00000538470 MYD88Q99836 296 aa11.14□□□□□ -0.63
DDB1-212ENST00000538470 METTL22Q9BUU2 404 aaPredicted RBP11.14□□□□□ -0.63
DDB1-212ENST00000538470 BCL2L13Q9BXK5 485 aa11.14□□□□□ -0.63
DDB1-212ENST00000538470 ABT1Q9ULW3 272 aaKnown RBP11.14□□□□□ -0.63
DDB1-212ENST00000538470 YDJCA8MPS7 323 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 ELL2O00472 640 aaPredicted RBP11.13□□□□□ -0.63
DDB1-212ENST00000538470 PDE8AO60658 829 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 RPS12P25398 132 aaKnown RBP11.13□□□□□ -0.63
DDB1-212ENST00000538470 RPS8P62241 208 aaKnown RBP11.13□□□□□ -0.63
DDB1-212ENST00000538470 GPSM2P81274 684 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 DEFB115Q30KQ5 88 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 STK31Q9BXU1 1019 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 PRDM10Q9NQV6 1147 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 PGAP2Q9UHJ9 254 aa11.13□□□□□ -0.63
DDB1-212ENST00000538470 NSFL1CQ9UNZ2 370 aaKnown RBP11.13□□□□□ -0.63
DDB1-212ENST00000538470 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
DDB1-212ENST00000538470 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 FOXN1O15353 648 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 RAD17O75943 681 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 ECE1P42892 770 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
DDB1-212ENST00000538470 MAP2K1Q02750 393 aaPredicted RBP11.12□□□□□ -0.63
DDB1-212ENST00000538470 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
DDB1-212ENST00000538470 DPF2Q92785 391 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 TLL2Q9Y6L7 1015 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
DDB1-212ENST00000538470 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
DDB1-212ENST00000538470 WDR33Q9C0J8 1336 aaKnown RBP11.11□□□□□ -0.63
DDB1-212ENST00000538470 H7C1D1 291 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 ECE2O60344 883 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 NEXNQ0ZGT2 675 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 KSR2Q6VAB6 950 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 TSPYL6Q8N831 410 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 TBC1D16Q8TBP0 767 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 TRPM4Q8TD43 1214 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
DDB1-212ENST00000538470 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 DBNDD1Q9H9R9 158 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 POLLQ9UGP5 575 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms