RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 MPNDQ8N594 471 aa12.56□□□□□ -0.4
CHD4-207ENST00000537634 RTFDC1Q9BY42 306 aaPredicted RBP12.56□□□□□ -0.4
CHD4-207ENST00000537634 IFT57Q9NWB7 429 aa12.56□□□□□ -0.4
CHD4-207ENST00000537634 TAF1P21675 1872 aa12.56□□□□□ -0.4
CHD4-207ENST00000537634 LRRC37AA6NMS7 1700 aa12.56□□□□□ -0.4
CHD4-207ENST00000537634 ATP5J2-PTCD1G3V325 749 aa12.55□□□□□ -0.4
CHD4-207ENST00000537634 EPS15P42566 896 aa12.55□□□□□ -0.4
CHD4-207ENST00000537634 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
CHD4-207ENST00000537634 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
CHD4-207ENST00000537634 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
CHD4-207ENST00000537634 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
CHD4-207ENST00000537634 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
CHD4-207ENST00000537634 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
CHD4-207ENST00000537634 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
CHD4-207ENST00000537634 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
CHD4-207ENST00000537634 FAM89AQ96GI7 184 aa12.54□□□□□ -0.4
CHD4-207ENST00000537634 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
CHD4-207ENST00000537634 CXCL9Q07325 125 aa12.53□□□□□ -0.4
CHD4-207ENST00000537634 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
CHD4-207ENST00000537634 USP50Q70EL3 339 aaPredicted RBP12.53□□□□□ -0.4
CHD4-207ENST00000537634 GPRC5DQ9NZD1 345 aa12.53□□□□□ -0.4
CHD4-207ENST00000537634 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.41
CHD4-207ENST00000537634 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.41
CHD4-207ENST00000537634 VEGFBP49765 207 aa12.52□□□□□ -0.41
CHD4-207ENST00000537634 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
CHD4-207ENST00000537634 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
CHD4-207ENST00000537634 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
CHD4-207ENST00000537634 CHMP4AQ9BY43 222 aa12.52□□□□□ -0.41
CHD4-207ENST00000537634 ADARB2Q9NS39 739 aaKnown RBP12.52□□□□□ -0.41
CHD4-207ENST00000537634 ABT1Q9ULW3 272 aaKnown RBP12.52□□□□□ -0.41
CHD4-207ENST00000537634 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
CHD4-207ENST00000537634 TRPM7Q96QT4 1865 aa12.52□□□□□ -0.41
CHD4-207ENST00000537634 RAD17O75943 681 aa12.51□□□□□ -0.41
CHD4-207ENST00000537634 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
CHD4-207ENST00000537634 GMPSP49915 693 aaPredicted RBP12.51□□□□□ -0.41
CHD4-207ENST00000537634 TNIP1Q15025 636 aa12.51□□□□□ -0.41
CHD4-207ENST00000537634 CELF1Q92879 486 aaKnown RBP12.51□□□□□ -0.41
CHD4-207ENST00000537634 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
CHD4-207ENST00000537634 PHAXQ9H814 394 aaKnown RBP12.51□□□□□ -0.41
CHD4-207ENST00000537634 RASSF10A6NK89 507 aa12.5□□□□□ -0.41
CHD4-207ENST00000537634 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
CHD4-207ENST00000537634 DEFB115Q30KQ5 88 aa12.5□□□□□ -0.41
CHD4-207ENST00000537634 CCDC30Q5VVM6 783 aa12.5□□□□□ -0.41
CHD4-207ENST00000537634 ZBTB38Q8NAP3 1195 aaPredicted RBP12.5□□□□□ -0.41
CHD4-207ENST00000537634 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
CHD4-207ENST00000537634 AIDAQ96BJ3 306 aa12.5□□□□□ -0.41
CHD4-207ENST00000537634 MYD88Q99836 296 aa12.5□□□□□ -0.41
CHD4-207ENST00000537634 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
CHD4-207ENST00000537634 COL4A1P02462 1669 aa12.49□□□□□ -0.41
CHD4-207ENST00000537634 C6orf229H3BNL8 230 aa12.49□□□□□ -0.41
CHD4-207ENST00000537634 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
CHD4-207ENST00000537634 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
CHD4-207ENST00000537634 YDJCA8MPS7 323 aa12.48□□□□□ -0.41
CHD4-207ENST00000537634 TRAF5O00463 557 aa12.48□□□□□ -0.41
CHD4-207ENST00000537634 FOXN1O15353 648 aa12.48□□□□□ -0.41
CHD4-207ENST00000537634 CAPN15O75808 1086 aa12.48□□□□□ -0.41
CHD4-207ENST00000537634 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
CHD4-207ENST00000537634 GPSM2P81274 684 aa12.48□□□□□ -0.41
CHD4-207ENST00000537634 FMR1Q06787 632 aaKnown RBP eCLIP12.48□□□□□ -0.417e-7■■■■□ 25.8
CHD4-207ENST00000537634 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
CHD4-207ENST00000537634 EYA3Q99504 573 aa12.48□□□□□ -0.41
CHD4-207ENST00000537634 CWC25Q9NXE8 425 aaPredicted RBP12.48□□□□□ -0.41
CHD4-207ENST00000537634 WDR33Q9C0J8 1336 aaKnown RBP12.47□□□□□ -0.41
CHD4-207ENST00000537634 RIMBP2O15034 1052 aa12.47□□□□□ -0.41
CHD4-207ENST00000537634 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
CHD4-207ENST00000537634 CTCFP49711 727 aaPredicted RBP12.47□□□□□ -0.41
CHD4-207ENST00000537634 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
CHD4-207ENST00000537634 TSR2Q969E8 191 aaKnown RBP12.47□□□□□ -0.41
CHD4-207ENST00000537634 METTL22Q9BUU2 404 aaPredicted RBP12.47□□□□□ -0.41
CHD4-207ENST00000537634 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
CHD4-207ENST00000537634 DBNDD1Q9H9R9 158 aa12.47□□□□□ -0.41
CHD4-207ENST00000537634 CNOT7Q9UIV1 285 aaKnown RBP12.47□□□□□ -0.41
CHD4-207ENST00000537634 THSD7BQ9C0I4 1608 aa12.47□□□□□ -0.41
CHD4-207ENST00000537634 H7C1D1 291 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 PDE8AO60658 829 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 ECE1P42892 770 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 MICALL2Q8IY33 904 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 TRPM4Q8TD43 1214 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 ZC3H15Q8WU90 426 aaKnown RBP12.46□□□□□ -0.41
CHD4-207ENST00000537634 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 POLLQ9UGP5 575 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 MAP3K2Q9Y2U5 619 aa12.46□□□□□ -0.41
CHD4-207ENST00000537634 PCNTO95613 3336 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 MYH3P11055 1940 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 PSMD14O00487 310 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 ECE2O60344 883 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 CELF2O95319 508 aaKnown RBP12.45□□□□□ -0.42
CHD4-207ENST00000537634 MAP2K1Q02750 393 aaPredicted RBP12.45□□□□□ -0.42
CHD4-207ENST00000537634 NEXNQ0ZGT2 675 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 GRM1Q13255 1194 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 CST9Q5W186 159 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
CHD4-207ENST00000537634 CAPNS2Q96L46 248 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 GLIS2Q9BZE0 524 aaPredicted RBP12.45□□□□□ -0.42
CHD4-207ENST00000537634 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms