RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
CCDC170-202ENST00000537358 SNED1Q8TER0 1413 aa12.73□□□□□ -0.37
CCDC170-202ENST00000537358 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
CCDC170-202ENST00000537358 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
CCDC170-202ENST00000537358 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
CCDC170-202ENST00000537358 SP8Q8IXZ3 490 aa12.73□□□□□ -0.37
CCDC170-202ENST00000537358 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
CCDC170-202ENST00000537358 TMEM88BA6NKF7 163 aa12.72□□□□□ -0.37
CCDC170-202ENST00000537358 APAF1O14727 1248 aa12.72□□□□□ -0.37
CCDC170-202ENST00000537358 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
CCDC170-202ENST00000537358 GRAPQ13588 217 aa12.72□□□□□ -0.37
CCDC170-202ENST00000537358 MPNDQ8N594 471 aa12.72□□□□□ -0.37
CCDC170-202ENST00000537358 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
CCDC170-202ENST00000537358 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
CCDC170-202ENST00000537358 MKRN1Q9UHC7 482 aaKnown RBP12.72□□□□□ -0.37
CCDC170-202ENST00000537358 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
CCDC170-202ENST00000537358 HSPA1AP0DMV8 641 aaKnown RBP12.71□□□□□ -0.37
CCDC170-202ENST00000537358 HSPA1BP0DMV9 641 aaKnown RBP12.71□□□□□ -0.37
CCDC170-202ENST00000537358 AOC3Q16853 763 aa12.71□□□□□ -0.37
CCDC170-202ENST00000537358 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
CCDC170-202ENST00000537358 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
CCDC170-202ENST00000537358 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.38
CCDC170-202ENST00000537358 PCNTO95613 3336 aa12.7□□□□□ -0.38
CCDC170-202ENST00000537358 MAP1SQ66K74 1059 aaPredicted RBP12.7□□□□□ -0.38
CCDC170-202ENST00000537358 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
CCDC170-202ENST00000537358 ISCA1Q9BUE6 129 aa12.7□□□□□ -0.38
CCDC170-202ENST00000537358 RTFDC1Q9BY42 306 aaPredicted RBP12.7□□□□□ -0.38
CCDC170-202ENST00000537358 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
CCDC170-202ENST00000537358 DDX60Q8IY21 1712 aaKnown RBP12.7□□□□□ -0.38
CCDC170-202ENST00000537358 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
CCDC170-202ENST00000537358 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
CCDC170-202ENST00000537358 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
CCDC170-202ENST00000537358 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
CCDC170-202ENST00000537358 ZNF853P0CG23 659 aa12.69□□□□□ -0.38
CCDC170-202ENST00000537358 TNIP1Q15025 636 aa12.69□□□□□ -0.38
CCDC170-202ENST00000537358 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
CCDC170-202ENST00000537358 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
CCDC170-202ENST00000537358 TAF1P21675 1872 aa12.69□□□□□ -0.38
CCDC170-202ENST00000537358 COL4A5P29400 1685 aa12.68□□□□□ -0.38
CCDC170-202ENST00000537358 SCNN1DP51172 638 aa12.68□□□□□ -0.38
CCDC170-202ENST00000537358 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
CCDC170-202ENST00000537358 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
CCDC170-202ENST00000537358 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
CCDC170-202ENST00000537358 CIAPIN1Q6FI81 312 aa12.68□□□□□ -0.38
CCDC170-202ENST00000537358 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
CCDC170-202ENST00000537358 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
CCDC170-202ENST00000537358 ADARB2Q9NS39 739 aaKnown RBP12.68□□□□□ -0.38
CCDC170-202ENST00000537358 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 ELL2O00472 640 aaPredicted RBP12.67□□□□□ -0.38
CCDC170-202ENST00000537358 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
CCDC170-202ENST00000537358 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
CCDC170-202ENST00000537358 EPS15P42566 896 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 CXCL9Q07325 125 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 SF3B3Q15393 1217 aaKnown RBP12.67□□□□□ -0.38
CCDC170-202ENST00000537358 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
CCDC170-202ENST00000537358 ZNF428Q96B54 188 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 EYA3Q99504 573 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 GPRC5DQ9NZD1 345 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
CCDC170-202ENST00000537358 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 TRPM7Q96QT4 1865 aa12.67□□□□□ -0.38
CCDC170-202ENST00000537358 LTBP1Q14766 1721 aa12.66□□□□□ -0.38
CCDC170-202ENST00000537358 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
CCDC170-202ENST00000537358 DEFB115Q30KQ5 88 aa12.66□□□□□ -0.38
CCDC170-202ENST00000537358 RTL5Q5HYW3 569 aaPredicted RBP12.66□□□□□ -0.38
CCDC170-202ENST00000537358 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
CCDC170-202ENST00000537358 STK31Q9BXU1 1019 aa12.66□□□□□ -0.38
CCDC170-202ENST00000537358 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
CCDC170-202ENST00000537358 G3V3G9 751 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 RAD17O75943 681 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 VEGFBP49765 207 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 GMPSP49915 693 aaPredicted RBP12.65□□□□□ -0.38
CCDC170-202ENST00000537358 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 SLC51AQ86UW1 340 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 MYD88Q99836 296 aa12.65□□□□□ -0.38
CCDC170-202ENST00000537358 CWC25Q9NXE8 425 aaPredicted RBP12.65□□□□□ -0.38
CCDC170-202ENST00000537358 RASSF10A6NK89 507 aa12.64□□□□□ -0.39
CCDC170-202ENST00000537358 H7C1D1 291 aa12.64□□□□□ -0.39
CCDC170-202ENST00000537358 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
CCDC170-202ENST00000537358 NEXNQ0ZGT2 675 aa12.64□□□□□ -0.39
CCDC170-202ENST00000537358 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
CCDC170-202ENST00000537358 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
CCDC170-202ENST00000537358 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
CCDC170-202ENST00000537358 PCCAP05165 728 aaPredicted RBP12.63□□□□□ -0.39
CCDC170-202ENST00000537358 ECE1P42892 770 aa12.63□□□□□ -0.39
CCDC170-202ENST00000537358 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
CCDC170-202ENST00000537358 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
CCDC170-202ENST00000537358 ANKIB1Q9P2G1 1089 aa12.63□□□□□ -0.39
CCDC170-202ENST00000537358 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
CCDC170-202ENST00000537358 ANP32CO43423 234 aa12.62□□□□□ -0.39
CCDC170-202ENST00000537358 PDE8AO60658 829 aa12.62□□□□□ -0.39
CCDC170-202ENST00000537358 CTCFP49711 727 aaPredicted RBP12.62□□□□□ -0.39
CCDC170-202ENST00000537358 MAP2K1Q02750 393 aaPredicted RBP12.62□□□□□ -0.39
CCDC170-202ENST00000537358 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
CCDC170-202ENST00000537358 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
CCDC170-202ENST00000537358 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
CCDC170-202ENST00000537358 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms