RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 BBOX1O75936 387 aa18.31■□□□□ 0.52
MSRB3-206ENST00000535664 TMC4Q7Z404 712 aa18.31■□□□□ 0.52
MSRB3-206ENST00000535664 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
MSRB3-206ENST00000535664 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
MSRB3-206ENST00000535664 DDX19BQ9UMR2 479 aa18.31■□□□□ 0.52
MSRB3-206ENST00000535664 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
MSRB3-206ENST00000535664 COL11A2P13942 1736 aaPredicted RBP18.3■□□□□ 0.52
MSRB3-206ENST00000535664 NFKBIEO00221 500 aa18.3■□□□□ 0.52
MSRB3-206ENST00000535664 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
MSRB3-206ENST00000535664 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
MSRB3-206ENST00000535664 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
MSRB3-206ENST00000535664 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
MSRB3-206ENST00000535664 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
MSRB3-206ENST00000535664 MAP3K2Q9Y2U5 619 aa18.3■□□□□ 0.52
MSRB3-206ENST00000535664 ATP5J2-PTCD1G3V325 749 aa18.29■□□□□ 0.52
MSRB3-206ENST00000535664 FKBP4Q02790 459 aaKnown RBP eCLIP18.29■□□□□ 0.52
MSRB3-206ENST00000535664 BEND3Q5T5X7 828 aa18.29■□□□□ 0.52
MSRB3-206ENST00000535664 DPY19L2Q6NUT2 758 aa18.29■□□□□ 0.52
MSRB3-206ENST00000535664 MYD88Q99836 296 aa18.29■□□□□ 0.52
MSRB3-206ENST00000535664 ZBTB7BO15156 539 aaPredicted RBP18.28■□□□□ 0.52
MSRB3-206ENST00000535664 RASSF7Q02833 373 aa18.28■□□□□ 0.52
MSRB3-206ENST00000535664 SF3B3Q15393 1217 aaKnown RBP18.28■□□□□ 0.52
MSRB3-206ENST00000535664 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
MSRB3-206ENST00000535664 PSMD1Q99460 953 aa18.28■□□□□ 0.52
MSRB3-206ENST00000535664 VPS33BQ9H267 617 aa18.28■□□□□ 0.52
MSRB3-206ENST00000535664 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
MSRB3-206ENST00000535664 PCCAP05165 728 aaPredicted RBP18.27■□□□□ 0.52
MSRB3-206ENST00000535664 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.52
MSRB3-206ENST00000535664 FAM89AQ96GI7 184 aa18.27■□□□□ 0.52
MSRB3-206ENST00000535664 ZBTB40Q9NUA8 1239 aa18.27■□□□□ 0.52
MSRB3-206ENST00000535664 SLX4Q8IY92 1834 aa18.26■□□□□ 0.51
MSRB3-206ENST00000535664 IRS4O14654 1257 aaPredicted RBP18.26■□□□□ 0.51
MSRB3-206ENST00000535664 AAMPQ13685 434 aa18.26■□□□□ 0.51
MSRB3-206ENST00000535664 ZNF526Q8TF50 670 aaPredicted RBP18.26■□□□□ 0.51
MSRB3-206ENST00000535664 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
MSRB3-206ENST00000535664 ATP6V0A2Q9Y487 856 aa18.26■□□□□ 0.51
MSRB3-206ENST00000535664 GLTPD2A6NH11 291 aa18.25■□□□□ 0.51
MSRB3-206ENST00000535664 IGKV5-2P06315 115 aa18.25■□□□□ 0.51
MSRB3-206ENST00000535664 C1QTNF8P60827 252 aa18.25■□□□□ 0.51
MSRB3-206ENST00000535664 SUPT20HQ8NEM7 779 aa18.25■□□□□ 0.51
MSRB3-206ENST00000535664 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
MSRB3-206ENST00000535664 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
MSRB3-206ENST00000535664 GRAPQ13588 217 aa18.24■□□□□ 0.51
MSRB3-206ENST00000535664 SP8Q8IXZ3 490 aa18.24■□□□□ 0.51
MSRB3-206ENST00000535664 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
MSRB3-206ENST00000535664 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
MSRB3-206ENST00000535664 SBF1O95248 1867 aa18.24■□□□□ 0.51
MSRB3-206ENST00000535664 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
MSRB3-206ENST00000535664 TNRC6CQ9HCJ0 1690 aaKnown RBP18.23■□□□□ 0.51
MSRB3-206ENST00000535664 PDE8AO60658 829 aa18.23■□□□□ 0.51
MSRB3-206ENST00000535664 C16orf71Q8IYS4 520 aaPredicted RBP18.23■□□□□ 0.51
MSRB3-206ENST00000535664 SYNE4Q8N205 404 aa18.23■□□□□ 0.51
MSRB3-206ENST00000535664 MEIS3Q99687 375 aa18.23■□□□□ 0.51
MSRB3-206ENST00000535664 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
MSRB3-206ENST00000535664 NEURL1BA8MQ27 555 aa18.22■□□□□ 0.51
MSRB3-206ENST00000535664 CWF19L2Q2TBE0 894 aaKnown RBP18.22■□□□□ 0.51
MSRB3-206ENST00000535664 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
MSRB3-206ENST00000535664 C3orf67Q6ZVT6 689 aa18.22■□□□□ 0.51
MSRB3-206ENST00000535664 JDP2Q8WYK2 163 aa18.22■□□□□ 0.51
MSRB3-206ENST00000535664 USP44Q9H0E7 712 aa18.22■□□□□ 0.51
MSRB3-206ENST00000535664 TOMM70O94826 608 aa18.21■□□□□ 0.51
MSRB3-206ENST00000535664 VEGFAP15692 232 aaPredicted RBP18.21■□□□□ 0.51
MSRB3-206ENST00000535664 IARSP41252 1262 aaKnown RBP18.21■□□□□ 0.51
MSRB3-206ENST00000535664 CHMP4BQ9H444 224 aaKnown RBP18.21■□□□□ 0.51
MSRB3-206ENST00000535664 PCDHB15Q9Y5E8 787 aa18.21■□□□□ 0.51
MSRB3-206ENST00000535664 KIF3CO14782 793 aa18.2■□□□□ 0.5
MSRB3-206ENST00000535664 PRELPP51888 382 aa18.2■□□□□ 0.5
MSRB3-206ENST00000535664 UTYO14607 1347 aa18.2■□□□□ 0.5
MSRB3-206ENST00000535664 DPP8Q6V1X1 898 aaPredicted RBP18.19■□□□□ 0.5
MSRB3-206ENST00000535664 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
MSRB3-206ENST00000535664 H7C1W4 665 aa18.18■□□□□ 0.5
MSRB3-206ENST00000535664 RPS8P62241 208 aaKnown RBP18.18■□□□□ 0.5
MSRB3-206ENST00000535664 GCKRQ14397 625 aa18.18■□□□□ 0.5
MSRB3-206ENST00000535664 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
MSRB3-206ENST00000535664 B4GALNT3Q6L9W6 998 aa18.18■□□□□ 0.5
MSRB3-206ENST00000535664 MPNDQ8N594 471 aa18.18■□□□□ 0.5
MSRB3-206ENST00000535664 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
MSRB3-206ENST00000535664 C1orf115Q9H7X2 142 aa18.18■□□□□ 0.5
MSRB3-206ENST00000535664 GNAI3P08754 354 aa18.17■□□□□ 0.5
MSRB3-206ENST00000535664 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
MSRB3-206ENST00000535664 RBM46Q8TBY0 533 aaKnown RBP18.17■□□□□ 0.5
MSRB3-206ENST00000535664 CDC5LQ99459 802 aaKnown RBP18.17■□□□□ 0.5
MSRB3-206ENST00000535664 RRAGCQ9HB90 399 aa18.17■□□□□ 0.5
MSRB3-206ENST00000535664 NMRK2Q9NPI5 230 aa18.17■□□□□ 0.5
MSRB3-206ENST00000535664 CACNA1SQ13698 1873 aa18.17■□□□□ 0.5
MSRB3-206ENST00000535664 SNED1Q8TER0 1413 aa18.16■□□□□ 0.5
MSRB3-206ENST00000535664 DICER1Q9UPY3 1922 aaKnown RBP18.16■□□□□ 0.5
MSRB3-206ENST00000535664 IQCA1LA6NCM1 817 aa18.16■□□□□ 0.5
MSRB3-206ENST00000535664 FZD9O00144 591 aa18.16■□□□□ 0.5
MSRB3-206ENST00000535664 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
MSRB3-206ENST00000535664 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
MSRB3-206ENST00000535664 GRM8O00222 908 aa18.15■□□□□ 0.5
MSRB3-206ENST00000535664 CASP7P55210 303 aa18.15■□□□□ 0.5
MSRB3-206ENST00000535664 EIF6P56537 245 aaKnown RBP18.15■□□□□ 0.5
MSRB3-206ENST00000535664 FSTL1Q12841 308 aa18.15■□□□□ 0.5
MSRB3-206ENST00000535664 CCDC136Q96JN2 1154 aa18.15■□□□□ 0.5
MSRB3-206ENST00000535664 PLA2G12BQ9BX93 195 aa18.15■□□□□ 0.5
MSRB3-206ENST00000535664 UBTFL1P0CB47 393 aaPredicted RBP18.14■□□□□ 0.49
MSRB3-206ENST00000535664 CTSWP56202 376 aa18.14■□□□□ 0.49
MSRB3-206ENST00000535664 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms