RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 UTP14AQ9BVJ6 771 aaKnown RBP20.82■□□□□ 0.92
SFSWAP-203ENST00000535236 POTEB2H3BUK9 544 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 ESR2Q92731 530 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 GDPD2Q9HCC8 539 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 ACSBG1Q96GR2 724 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 NLRP3Q96P20 1036 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 SYNCQ9H7C4 482 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 IQGAP2Q13576 1575 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 ANXA1P04083 346 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 ISM2Q6H9L7 571 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 TBC1D5Q92609 795 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 TNPO1Q92973 898 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 VTI1AQ96AJ9 217 aa20.81■□□□□ 0.92
SFSWAP-203ENST00000535236 IFI16Q16666 785 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 ATP2B3Q16720 1220 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 TMTC2Q8N394 836 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 TSHZ3Q63HK5 1081 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 ABCC5O15440 1437 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 ZBTB43O43298 467 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 TTC22Q5TAA0 569 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 CLEC11AQ9Y240 323 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 SCAF11Q99590 1463 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 GOLGA6L9A6NEM1 432 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 BMP2KLQ5H9B9 411 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 RHPN1Q8TCX5 695 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 SSX2IPQ9Y2D8 614 aa20.8■□□□□ 0.92
SFSWAP-203ENST00000535236 BMP15O95972 392 aa20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 PICALMQ13492 652 aa20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 ZSCAN16Q9H4T2 348 aaPredicted RBP20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 CCDC175P0C221 793 aa20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 GIGYF2Q6Y7W6 1299 aaKnown RBP20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 N4BP3O15049 544 aa20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 RBM25P49756 843 aaKnown RBP20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 HEATR3Q7Z4Q2 680 aa20.79■□□□□ 0.92
SFSWAP-203ENST00000535236 PHACTR2O75167 634 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 GNAQP50148 359 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 ZNF804AQ7Z570 1209 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 XAGE3Q8WTP9 111 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 IQSEC3Q9UPP2 1182 aaPredicted RBP20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 RRAGBQ5VZM2 374 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 BRF1Q92994 677 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 CHPF2Q9P2E5 772 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 KRT13P13646 458 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 JADE2Q9NQC1 790 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.78■□□□□ 0.922e-6■■■■■ 31.8
SFSWAP-203ENST00000535236 FERP16591 822 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 STAT6P42226 847 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 GRM1Q13255 1194 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 RTN1Q16799 776 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 MICALCLQ6ZW33 695 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 TBC1D2Q9BYX2 928 aa20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 C14orf93Q9H972 538 aaKnown RBP20.78■□□□□ 0.92
SFSWAP-203ENST00000535236 ANKRD36BQ8N2N9 1353 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 IKBKGQ9Y6K9 419 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 ZNF165P49910 485 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 SMARCC2Q8TAQ2 1214 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 C16orf45Q96MC5 204 aaPredicted RBP20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 IL16Q14005 1332 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 AKR1B10O60218 316 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 SYKP43405 635 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 LRRC45Q96CN5 670 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 SPAG5Q96R06 1193 aa20.77■□□□□ 0.92
SFSWAP-203ENST00000535236 CEP63Q96MT8 703 aa20.77■□□□□ 0.91
SFSWAP-203ENST00000535236 CGNQ9P2M7 1197 aaKnown RBP20.77■□□□□ 0.91
SFSWAP-203ENST00000535236 RNF187Q5TA31 235 aaPredicted RBP20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 MAATS1Q7Z4T9 603 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 EHBP1Q8NDI1 1231 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 PPM1EQ8WY54 764 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 ALG1Q9BT22 464 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 TOM1O60784 492 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 PLVAPQ9BX97 442 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 ZNF354CQ86Y25 554 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 NIP7Q9Y221 180 aaKnown RBP eCLIP20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 KIAA0753Q2KHM9 967 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 COPS6Q7L5N1 327 aa20.76■□□□□ 0.91
SFSWAP-203ENST00000535236 UBE2HP62256 183 aa20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 SKAP1Q86WV1 359 aa20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 AFMP43652 599 aa20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 MAP3K9P80192 1104 aa20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 UBAP1LF5GYI3 381 aa20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 NAPAP54920 295 aa20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 SNW1Q13573 536 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 NYXQ9GZU5 481 aa20.75■□□□□ 0.91
SFSWAP-203ENST00000535236 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 CAVIN2O95810 425 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 CTR9Q6PD62 1173 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 BBXQ8WY36 941 aaPredicted RBP20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 B4DLN1 442 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 ADCY5O95622 1261 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 MRPL12P52815 198 aaKnown RBP20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.74■□□□□ 0.913e-7■■■□□ 18.5
SFSWAP-203ENST00000535236 PTPN23Q9H3S7 1636 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 PPP1R14CQ8TAE6 165 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 DDX12PQ92771 950 aa20.74■□□□□ 0.91
SFSWAP-203ENST00000535236 TNRQ92752 1358 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms