RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 PCCAP05165 728 aaPredicted RBP6.52□□□□□ -1.37
USH1C-210ENST00000534556 POTEIP0CG38 1075 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 POTEJP0CG39 1038 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 ALDH1B1P30837 517 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 GOLGA2Q08379 1002 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 EPHA10Q5JZY3 1008 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 DIEXFQ68CQ4 756 aaKnown RBP6.52□□□□□ -1.37
USH1C-210ENST00000534556 MRPL50Q8N5N7 158 aaKnown RBP6.52□□□□□ -1.37
USH1C-210ENST00000534556 ZBTB38Q8NAP3 1195 aaPredicted RBP6.52□□□□□ -1.37
USH1C-210ENST00000534556 CCDC191Q8NCU4 936 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 RPGRQ92834 1020 aaKnown RBP6.52□□□□□ -1.37
USH1C-210ENST00000534556 GPR101Q96P66 508 aaPredicted RBP6.52□□□□□ -1.37
USH1C-210ENST00000534556 CCDC85AQ96PX6 553 aaPredicted RBP6.52□□□□□ -1.37
USH1C-210ENST00000534556 TAOK3Q9H2K8 898 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 ATP6V0A2Q9Y487 856 aa6.52□□□□□ -1.37
USH1C-210ENST00000534556 MYH13Q9UKX3 1938 aa6.51□□□□□ -1.37
USH1C-210ENST00000534556 H7C1W4 665 aa6.51□□□□□ -1.37
USH1C-210ENST00000534556 IARSP41252 1262 aaKnown RBP6.51□□□□□ -1.37
USH1C-210ENST00000534556 GRAPQ13588 217 aa6.51□□□□□ -1.37
USH1C-210ENST00000534556 BEND3Q5T5X7 828 aa6.51□□□□□ -1.37
USH1C-210ENST00000534556 GRAPLQ8TC17 118 aaPredicted RBP6.51□□□□□ -1.37
USH1C-210ENST00000534556 SSH1Q8WYL5 1049 aa6.51□□□□□ -1.37
USH1C-210ENST00000534556 RBM17Q96I25 401 aaKnown RBP6.51□□□□□ -1.37
USH1C-210ENST00000534556 PSMD1Q99460 953 aa6.51□□□□□ -1.37
USH1C-210ENST00000534556 CWC25Q9NXE8 425 aaPredicted RBP6.51□□□□□ -1.37
USH1C-210ENST00000534556 CDHR2Q9BYE9 1310 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 YDJCA8MPS7 323 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 FZD9O00144 591 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 GPSM2P81274 684 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 HTRA3P83110 453 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
USH1C-210ENST00000534556 GCKRQ14397 625 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 AOC3Q16853 763 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 UBE3BQ7Z3V4 1068 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 SP8Q8IXZ3 490 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 TTLL11Q8NHH1 800 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 DNAAF4Q8WXU2 420 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 KAZALD1Q96I82 304 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 BCL2L13Q9BXK5 485 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 STK31Q9BXU1 1019 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 RTFDC1Q9BY42 306 aaPredicted RBP6.5□□□□□ -1.37
USH1C-210ENST00000534556 MYH16Q9H6N6 1097 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 KCNQ5Q9NR82 932 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 POLLQ9UGP5 575 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 TNNQ9UQP3 1299 aa6.5□□□□□ -1.37
USH1C-210ENST00000534556 ZC3H4Q9UPT8 1303 aaKnown RBP6.5□□□□□ -1.37
USH1C-210ENST00000534556 MYO5AQ9Y4I1 1855 aaKnown RBP6.49□□□□□ -1.37
USH1C-210ENST00000534556 ECM29Q5VYK3 1845 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 SHTN1A0MZ66 631 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 SNAP23O00161 211 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 PDE8AO60658 829 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 BBOX1O75936 387 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 DDX58O95786 925 aaKnown RBP6.49□□□□□ -1.37
USH1C-210ENST00000534556 CTSWP56202 376 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 FOXO4P98177 505 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 DDX46Q7L014 1031 aaKnown RBP6.49□□□□□ -1.37
USH1C-210ENST00000534556 RTKN2Q8IZC4 609 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 GREM2Q9H772 168 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 KDM2BQ8NHM5 1336 aa6.49□□□□□ -1.37
USH1C-210ENST00000534556 E9PSI1 815 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 TOMM70O94826 608 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 CSF1RP07333 972 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 VEGFAP15692 232 aaPredicted RBP6.48□□□□□ -1.37
USH1C-210ENST00000534556 SCNN1DP51172 638 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 RPS8P62241 208 aaKnown RBP6.48□□□□□ -1.37
USH1C-210ENST00000534556 FMR1Q06787 632 aaKnown RBP eCLIP6.48□□□□□ -1.37
USH1C-210ENST00000534556 CXCL9Q07325 125 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 FAM161AQ3B820 660 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 CC2D2BQ6DHV5 1058 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 MPNDQ8N594 471 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 DNAJC5GQ8N7S2 189 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 LINS1Q8NG48 757 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 PLA2G12BQ9BX93 195 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 IRS2Q9Y4H2 1338 aa6.48□□□□□ -1.37
USH1C-210ENST00000534556 ARAP2Q8WZ64 1704 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 RTL9Q8NET4 1388 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 RIMBP2O15034 1052 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 PPIP5K2O43314 1243 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 NBPF7P0C2Y1 421 aaPredicted RBP6.47□□□□□ -1.37
USH1C-210ENST00000534556 HSPA6P17066 643 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 KLRK1P26718 216 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 EPS15P42566 896 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 KIAA2012Q0VF49 1180 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 DPP8Q6V1X1 898 aaPredicted RBP6.47□□□□□ -1.37
USH1C-210ENST00000534556 TXNRD3Q86VQ6 643 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 LARGE2Q8N3Y3 721 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 TBC1D16Q8TBP0 767 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 RBM46Q8TBY0 533 aaKnown RBP6.47□□□□□ -1.37
USH1C-210ENST00000534556 SUCLG2Q96I99 432 aa6.47□□□□□ -1.37
USH1C-210ENST00000534556 ZNF594Q96JF6 807 aaPredicted RBP6.47□□□□□ -1.37
USH1C-210ENST00000534556 L3MBTL3Q96JM7 780 aaPredicted RBP6.47□□□□□ -1.37
USH1C-210ENST00000534556 TAF1DQ9H5J8 278 aaPredicted RBP6.47□□□□□ -1.37
USH1C-210ENST00000534556 RAD17O75943 681 aa6.46□□□□□ -1.38
USH1C-210ENST00000534556 EGFRP00533 1210 aa6.46□□□□□ -1.38
USH1C-210ENST00000534556 RARSP54136 660 aaKnown RBP6.46□□□□□ -1.38
USH1C-210ENST00000534556 NEXNQ0ZGT2 675 aa6.46□□□□□ -1.38
USH1C-210ENST00000534556 DOK7Q18PE1 504 aa6.46□□□□□ -1.38
USH1C-210ENST00000534556 CCDC152Q4G0S7 254 aa6.46□□□□□ -1.38
USH1C-210ENST00000534556 SLC4A10Q6U841 1118 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms