RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	ALDH1L2	Q3SY69	923 aa		18.47	■□□□□ 0.55
CTSB-231	ENST00000534382	BEND3	Q5T5X7	828 aa		18.47	■□□□□ 0.55
CTSB-231	ENST00000534382	LAMB2	P55268	1798 aa		18.47	■□□□□ 0.55
CTSB-231	ENST00000534382	SP8	Q8IXZ3	490 aa		18.46	■□□□□ 0.55
CTSB-231	ENST00000534382	PSMD1	Q99460	953 aa		18.46	■□□□□ 0.55
CTSB-231	ENST00000534382	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.46	■□□□□ 0.55
CTSB-231	ENST00000534382	SNED1	Q8TER0	1413 aa		18.46	■□□□□ 0.55
CTSB-231	ENST00000534382	CCDC152	Q4G0S7	254 aa		18.45	■□□□□ 0.54
CTSB-231	ENST00000534382	UBE3B	Q7Z3V4	1068 aa		18.45	■□□□□ 0.54
CTSB-231	ENST00000534382	TMC4	Q7Z404	712 aa		18.45	■□□□□ 0.54
CTSB-231	ENST00000534382	SLC51A	Q86UW1	340 aa		18.45	■□□□□ 0.54
CTSB-231	ENST00000534382	BCL2L13	Q9BXK5	485 aa		18.45	■□□□□ 0.54
CTSB-231	ENST00000534382	SLC4A10	Q6U841	1118 aa		18.44	■□□□□ 0.54
CTSB-231	ENST00000534382	CELF1	Q92879	486 aa	Known RBP	18.44	■□□□□ 0.54
CTSB-231	ENST00000534382	SMC4	Q9NTJ3	1288 aa		18.44	■□□□□ 0.54
CTSB-231	ENST00000534382	PTPRC	P08575	1304 aa		18.44	■□□□□ 0.54
CTSB-231	ENST00000534382	IARS	P41252	1262 aa	Known RBP	18.43	■□□□□ 0.54
CTSB-231	ENST00000534382	CASP7	P55210	303 aa		18.43	■□□□□ 0.54
CTSB-231	ENST00000534382	CTSW	P56202	376 aa		18.43	■□□□□ 0.54
CTSB-231	ENST00000534382	RPS8	P62241	208 aa	Known RBP	18.43	■□□□□ 0.54
CTSB-231	ENST00000534382	SEC31B	Q9NQW1	1179 aa		18.43	■□□□□ 0.54
CTSB-231	ENST00000534382	CCDC88A	Q3V6T2	1871 aa		18.43	■□□□□ 0.54
CTSB-231	ENST00000534382	KDM2B	Q8NHM5	1336 aa		18.43	■□□□□ 0.54
CTSB-231	ENST00000534382	GLTPD2	A6NH11	291 aa		18.42	■□□□□ 0.54
CTSB-231	ENST00000534382	ALDH1L1	O75891	902 aa		18.42	■□□□□ 0.54
CTSB-231	ENST00000534382	TTLL11	Q8NHH1	800 aa		18.42	■□□□□ 0.54
CTSB-231	ENST00000534382	PLA2G12B	Q9BX93	195 aa		18.42	■□□□□ 0.54
CTSB-231	ENST00000534382	DPY19L2	Q6NUT2	758 aa		18.41	■□□□□ 0.54
CTSB-231	ENST00000534382	MPND	Q8N594	471 aa		18.41	■□□□□ 0.54
CTSB-231	ENST00000534382	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.41	■□□□□ 0.54
CTSB-231	ENST00000534382	SRCIN1	Q9C0H9	1055 aa		18.41	■□□□□ 0.54
CTSB-231	ENST00000534382	RARS	P54136	660 aa	Known RBP	18.4	■□□□□ 0.54
CTSB-231	ENST00000534382	BRPF1	P55201	1214 aa	Predicted RBP	18.4	■□□□□ 0.54
CTSB-231	ENST00000534382	DPP8	Q6V1X1	898 aa	Predicted RBP	18.4	■□□□□ 0.54
CTSB-231	ENST00000534382	SUPT20H	Q8NEM7	779 aa		18.4	■□□□□ 0.54
CTSB-231	ENST00000534382	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.4	■□□□□ 0.54
CTSB-231	ENST00000534382	NMRK2	Q9NPI5	230 aa		18.4	■□□□□ 0.54
CTSB-231	ENST00000534382	ZBED9	Q6R2W3	1325 aa		18.4	■□□□□ 0.54
CTSB-231	ENST00000534382	TAF1	P21675	1872 aa		18.39	■□□□□ 0.54
CTSB-231	ENST00000534382	DICER1	Q9UPY3	1922 aa	Known RBP	18.39	■□□□□ 0.53
CTSB-231	ENST00000534382	GRM8	O00222	908 aa		18.39	■□□□□ 0.53
CTSB-231	ENST00000534382	KIF3C	O14782	793 aa		18.39	■□□□□ 0.53
CTSB-231	ENST00000534382	VPS33B	Q9H267	617 aa		18.39	■□□□□ 0.53
CTSB-231	ENST00000534382	GREM2	Q9H772	168 aa		18.39	■□□□□ 0.53
CTSB-231	ENST00000534382	CSF1R	P07333	972 aa		18.38	■□□□□ 0.53
CTSB-231	ENST00000534382	ANKRD18A	Q8IVF6	992 aa		18.38	■□□□□ 0.53
CTSB-231	ENST00000534382	JDP2	Q8WYK2	163 aa		18.38	■□□□□ 0.53
CTSB-231	ENST00000534382	CDC5L	Q99459	802 aa	Known RBP	18.38	■□□□□ 0.53
CTSB-231	ENST00000534382	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.38	■□□□□ 0.53
CTSB-231	ENST00000534382	NOB1	Q9ULX3	412 aa	Known RBP	18.38	■□□□□ 0.53
CTSB-231	ENST00000534382	LARGE2	Q8N3Y3	721 aa		18.37	■□□□□ 0.53
CTSB-231	ENST00000534382	RRAGC	Q9HB90	399 aa		18.37	■□□□□ 0.53
CTSB-231	ENST00000534382	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.37	■□□□□ 0.53
CTSB-231	ENST00000534382	RTL9	Q8NET4	1388 aa		18.37	■□□□□ 0.53
CTSB-231	ENST00000534382	COL4A1	P02462	1669 aa		18.37	■□□□□ 0.53
CTSB-231	ENST00000534382	TIAM2	Q8IVF5	1701 aa		18.37	■□□□□ 0.53
CTSB-231	ENST00000534382	FZD9	O00144	591 aa		18.36	■□□□□ 0.53
CTSB-231	ENST00000534382	PPIP5K2	O43314	1243 aa		18.36	■□□□□ 0.53
CTSB-231	ENST00000534382	GPSM2	P81274	684 aa		18.36	■□□□□ 0.53
CTSB-231	ENST00000534382	FOXO4	P98177	505 aa		18.36	■□□□□ 0.53
CTSB-231	ENST00000534382	AOC3	Q16853	763 aa		18.36	■□□□□ 0.53
CTSB-231	ENST00000534382	DDN	O94850	711 aa	Predicted RBP	18.35	■□□□□ 0.53
CTSB-231	ENST00000534382	C1QTNF8	P60827	252 aa		18.35	■□□□□ 0.53
CTSB-231	ENST00000534382	UTY	O14607	1347 aa		18.34	■□□□□ 0.53
CTSB-231	ENST00000534382	ITGA6	P23229	1130 aa		18.34	■□□□□ 0.53
CTSB-231	ENST00000534382	API5	Q9BZZ5	524 aa	Known RBP	18.34	■□□□□ 0.53
CTSB-231	ENST00000534382	BSDC1	Q9NW68	430 aa	Predicted RBP	18.34	■□□□□ 0.53
CTSB-231	ENST00000534382	PODXL2	Q9NZ53	605 aa		18.34	■□□□□ 0.53
CTSB-231	ENST00000534382	MYH3	P11055	1940 aa		18.33	■□□□□ 0.53
CTSB-231	ENST00000534382	KIF16B	Q96L93	1317 aa		18.33	■□□□□ 0.53
CTSB-231	ENST00000534382	LRRC37A	A6NMS7	1700 aa		18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	VEGFA	P15692	232 aa	Predicted RBP	18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	EIF6	P56537	245 aa	Known RBP	18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	KIAA2012	Q0VF49	1180 aa		18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	FAM161A	Q3B820	660 aa		18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	NIM1K	Q8IY84	436 aa		18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	ARHGAP45	Q92619	1136 aa		18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	POLL	Q9UGP5	575 aa		18.33	■□□□□ 0.52
CTSB-231	ENST00000534382	ZNF541	Q9H0D2	1346 aa		18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	C6orf229	H3BNL8	230 aa		18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	TOMM70	O94826	608 aa		18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	IGHMBP2	P38935	993 aa	Known RBP	18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	WASHC4	Q2M389	1173 aa		18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	EPHA10	Q5JZY3	1008 aa		18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	LMBR1L	Q6UX01	489 aa		18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	ANKIB1	Q9P2G1	1089 aa		18.32	■□□□□ 0.52
CTSB-231	ENST00000534382	COL4A5	P29400	1685 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	ANKRD18B	A2A2Z9	1011 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	POTEC	B2RU33	542 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	BCAR3	O75815	825 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	CCT4	P50991	539 aa	Known RBP	18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	TBC1D16	Q8TBP0	767 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	SUCLG2	Q96I99	432 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	USP44	Q9H0E7	712 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	MINPP1	Q9UNW1	487 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	CHMP3	Q9Y3E7	222 aa		18.31	■□□□□ 0.52
CTSB-231	ENST00000534382	DUOX1	Q9NRD9	1551 aa		18.3	■□□□□ 0.52
CTSB-231	ENST00000534382	IPO8	O15397	1037 aa	Known RBP	18.3	■□□□□ 0.52

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