RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DDX46Q7L014 1031 aaKnown RBP24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 MPNDQ8N594 471 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 SUPT20HQ8NEM7 779 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 WBP1LQ9NX94 342 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 GPRC5DQ9NZD1 345 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 ZNRF3Q9ULT6 936 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 CTCFP49711 727 aaPredicted RBP24.05■■□□□ 1.44
SSSCA1-206ENST00000531405 HDGFL1Q5TGJ6 251 aa24.05■■□□□ 1.44
SSSCA1-206ENST00000531405 VPS33BQ9H267 617 aa24.05■■□□□ 1.44
SSSCA1-206ENST00000531405 WDR33Q9C0J8 1336 aaKnown RBP24.05■■□□□ 1.44
SSSCA1-206ENST00000531405 GRAPQ13588 217 aa24.04■■□□□ 1.44
SSSCA1-206ENST00000531405 GRAPLQ8TC17 118 aaPredicted RBP24.04■■□□□ 1.44
SSSCA1-206ENST00000531405 PRDM10Q9NQV6 1147 aa24.04■■□□□ 1.44
SSSCA1-206ENST00000531405 ADAMTS8Q9UP79 889 aa24.04■■□□□ 1.44
SSSCA1-206ENST00000531405 POLR2AP24928 1970 aaKnown RBP24.03■■□□□ 1.44
SSSCA1-206ENST00000531405 GMPSP49915 693 aaPredicted RBP24.03■■□□□ 1.44
SSSCA1-206ENST00000531405 KIAA2012Q0VF49 1180 aa24.03■■□□□ 1.44
SSSCA1-206ENST00000531405 ADARB2Q9NS39 739 aaKnown RBP24.03■■□□□ 1.44
SSSCA1-206ENST00000531405 RAD17O75943 681 aa24.02■■□□□ 1.44
SSSCA1-206ENST00000531405 LBX1P52954 281 aa24.02■■□□□ 1.44
SSSCA1-206ENST00000531405 CST9Q5W186 159 aa24.02■■□□□ 1.44
SSSCA1-206ENST00000531405 PLBD2Q8NHP8 589 aa24.02■■□□□ 1.44
SSSCA1-206ENST00000531405 ATP5J2-PTCD1G3V325 749 aa24.01■■□□□ 1.43
SSSCA1-206ENST00000531405 CIAPIN1Q6FI81 312 aa24.01■■□□□ 1.43
SSSCA1-206ENST00000531405 ANKRD13DQ6ZTN6 518 aa24.01■■□□□ 1.43
SSSCA1-206ENST00000531405 PAXIP1Q6ZW49 1069 aaPredicted RBP24.01■■□□□ 1.43
SSSCA1-206ENST00000531405 FAM89AQ96GI7 184 aa24.01■■□□□ 1.43
SSSCA1-206ENST00000531405 GRM1Q13255 1194 aa24■■□□□ 1.43
SSSCA1-206ENST00000531405 ISCA1Q9BUE6 129 aa24■■□□□ 1.43
SSSCA1-206ENST00000531405 YDJCA8MPS7 323 aa23.99■■□□□ 1.43
SSSCA1-206ENST00000531405 HOXB7P09629 217 aa23.99■■□□□ 1.43
SSSCA1-206ENST00000531405 RTL5Q5HYW3 569 aaPredicted RBP23.99■■□□□ 1.43
SSSCA1-206ENST00000531405 CYP4F22Q6NT55 531 aa23.99■■□□□ 1.43
SSSCA1-206ENST00000531405 CAPNS2Q96L46 248 aa23.99■■□□□ 1.43
SSSCA1-206ENST00000531405 DBF4Q9UBU7 674 aaPredicted RBP23.99■■□□□ 1.43
SSSCA1-206ENST00000531405 HSPA8P11142 646 aaKnown RBP23.98■■□□□ 1.43
SSSCA1-206ENST00000531405 DUSP27Q5VZP5 1158 aa23.98■■□□□ 1.43
SSSCA1-206ENST00000531405 CELF1Q92879 486 aaKnown RBP23.98■■□□□ 1.43
SSSCA1-206ENST00000531405 BCL2L13Q9BXK5 485 aa23.98■■□□□ 1.43
SSSCA1-206ENST00000531405 MBIPQ9NS73 344 aa23.98■■□□□ 1.43
SSSCA1-206ENST00000531405 SHTN1A0MZ66 631 aa23.97■■□□□ 1.43
SSSCA1-206ENST00000531405 CFAP44Q96MT7 982 aa23.97■■□□□ 1.43
SSSCA1-206ENST00000531405 GLIS2Q9BZE0 524 aaPredicted RBP23.97■■□□□ 1.43
SSSCA1-206ENST00000531405 SCN9AQ15858 1988 aa23.96■■□□□ 1.43
SSSCA1-206ENST00000531405 MAP2K1Q02750 393 aaPredicted RBP23.96■■□□□ 1.43
SSSCA1-206ENST00000531405 TNIP1Q15025 636 aa23.96■■□□□ 1.43
SSSCA1-206ENST00000531405 TMC4Q7Z404 712 aa23.96■■□□□ 1.43
SSSCA1-206ENST00000531405 TRPM4Q8TD43 1214 aa23.96■■□□□ 1.43
SSSCA1-206ENST00000531405 HYPKQ9NX55 129 aa23.96■■□□□ 1.43
SSSCA1-206ENST00000531405 TLL2Q9Y6L7 1015 aa23.96■■□□□ 1.43
SSSCA1-206ENST00000531405 CDHR2Q9BYE9 1310 aa23.95■■□□□ 1.42
SSSCA1-206ENST00000531405 HIRAP54198 1017 aaPredicted RBP23.95■■□□□ 1.42
SSSCA1-206ENST00000531405 CELF2O95319 508 aaKnown RBP23.94■■□□□ 1.42
SSSCA1-206ENST00000531405 SF3B3Q15393 1217 aaKnown RBP23.94■■□□□ 1.42
SSSCA1-206ENST00000531405 GPR101Q96P66 508 aaPredicted RBP23.94■■□□□ 1.42
SSSCA1-206ENST00000531405 NSFL1CQ9UNZ2 370 aaKnown RBP23.94■■□□□ 1.42
SSSCA1-206ENST00000531405 RIMBP2O15034 1052 aa23.93■■□□□ 1.42
SSSCA1-206ENST00000531405 ECE1P42892 770 aa23.93■■□□□ 1.42
SSSCA1-206ENST00000531405 DBNDD1Q9H9R9 158 aa23.93■■□□□ 1.42
SSSCA1-206ENST00000531405 PGAP2Q9UHJ9 254 aa23.93■■□□□ 1.42
SSSCA1-206ENST00000531405 CNOT7Q9UIV1 285 aaKnown RBP23.93■■□□□ 1.42
SSSCA1-206ENST00000531405 ZBTB12Q9Y330 459 aaPredicted RBP23.93■■□□□ 1.42
SSSCA1-206ENST00000531405 SPEF2Q9C093 1822 aa23.93■■□□□ 1.42
SSSCA1-206ENST00000531405 IRS4O14654 1257 aaPredicted RBP23.92■■□□□ 1.42
SSSCA1-206ENST00000531405 AOC2O75106 756 aa23.92■■□□□ 1.42
SSSCA1-206ENST00000531405 GPSM2P81274 684 aa23.92■■□□□ 1.42
SSSCA1-206ENST00000531405 WASHC4Q2M389 1173 aa23.92■■□□□ 1.42
SSSCA1-206ENST00000531405 ZNF408Q9H9D4 720 aa23.92■■□□□ 1.42
SSSCA1-206ENST00000531405 POLLQ9UGP5 575 aa23.92■■□□□ 1.42
SSSCA1-206ENST00000531405 C6orf229H3BNL8 230 aa23.91■■□□□ 1.42
SSSCA1-206ENST00000531405 ELL2O00472 640 aaPredicted RBP23.91■■□□□ 1.42
SSSCA1-206ENST00000531405 ZNF853P0CG23 659 aa23.91■■□□□ 1.42
SSSCA1-206ENST00000531405 SAPCD2Q86UD0 394 aa23.91■■□□□ 1.42
SSSCA1-206ENST00000531405 MICALL2Q8IY33 904 aa23.91■■□□□ 1.42
SSSCA1-206ENST00000531405 PHAXQ9H814 394 aaKnown RBP23.91■■□□□ 1.42
SSSCA1-206ENST00000531405 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
SSSCA1-206ENST00000531405 MYH3P11055 1940 aa23.9■■□□□ 1.42
SSSCA1-206ENST00000531405 PSME4Q14997 1843 aa23.9■■□□□ 1.42
SSSCA1-206ENST00000531405 PSMD14O00487 310 aa23.9■■□□□ 1.42
SSSCA1-206ENST00000531405 APAF1O14727 1248 aa23.9■■□□□ 1.42
SSSCA1-206ENST00000531405 RIC3Q7Z5B4 369 aa23.9■■□□□ 1.42
SSSCA1-206ENST00000531405 CASP8AP2Q9UKL3 1982 aa23.9■■□□□ 1.42
SSSCA1-206ENST00000531405 H7C1D1 291 aa23.89■■□□□ 1.41
SSSCA1-206ENST00000531405 TRIM28Q13263 835 aaKnown RBP23.89■■□□□ 1.41
SSSCA1-206ENST00000531405 ZC3H15Q8WU90 426 aaKnown RBP23.89■■□□□ 1.41
SSSCA1-206ENST00000531405 KCNQ5Q9NR82 932 aa23.89■■□□□ 1.41
SSSCA1-206ENST00000531405 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
SSSCA1-206ENST00000531405 DOK7Q18PE1 504 aa23.88■■□□□ 1.41
SSSCA1-206ENST00000531405 DLK2Q6UY11 383 aa23.88■■□□□ 1.41
SSSCA1-206ENST00000531405 SAMD7Q7Z3H4 446 aa23.88■■□□□ 1.41
SSSCA1-206ENST00000531405 BEGAINQ9BUH8 593 aa23.88■■□□□ 1.41
SSSCA1-206ENST00000531405 IFT57Q9NWB7 429 aa23.88■■□□□ 1.41
SSSCA1-206ENST00000531405 TSKSQ9UJT2 592 aa23.88■■□□□ 1.41
SSSCA1-206ENST00000531405 ECE2O60344 883 aa23.87■■□□□ 1.41
SSSCA1-206ENST00000531405 RPS8P62241 208 aaKnown RBP23.87■■□□□ 1.41
SSSCA1-206ENST00000531405 CDC37L1Q7L3B6 337 aa23.87■■□□□ 1.41
SSSCA1-206ENST00000531405 ZBTB38Q8NAP3 1195 aaPredicted RBP23.87■■□□□ 1.41
SSSCA1-206ENST00000531405 MYD88Q99836 296 aa23.87■■□□□ 1.41
SSSCA1-206ENST00000531405 SEC31BQ9NQW1 1179 aa23.87■■□□□ 1.41
SSSCA1-206ENST00000531405 RTL9Q8NET4 1388 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms