RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SCNN1DP51172 638 aa20.44■□□□□ 0.86
CPSF1-205ENST00000531042 CCDC184Q52MB2 194 aa20.44■□□□□ 0.86
CPSF1-205ENST00000531042 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
CPSF1-205ENST00000531042 PHAXQ9H814 394 aaKnown RBP20.44■□□□□ 0.86
CPSF1-205ENST00000531042 MKRN1Q9UHC7 482 aaKnown RBP20.44■□□□□ 0.86
CPSF1-205ENST00000531042 EPS15P42566 896 aa20.43■□□□□ 0.86
CPSF1-205ENST00000531042 GOLGA2Q08379 1002 aa20.43■□□□□ 0.86
CPSF1-205ENST00000531042 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
CPSF1-205ENST00000531042 MAP1SQ66K74 1059 aaPredicted RBP20.43■□□□□ 0.86
CPSF1-205ENST00000531042 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
CPSF1-205ENST00000531042 RIC3Q7Z5B4 369 aa20.43■□□□□ 0.86
CPSF1-205ENST00000531042 CNTROBQ8N137 903 aa20.43■□□□□ 0.86
CPSF1-205ENST00000531042 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
CPSF1-205ENST00000531042 LRRC37AA6NMS7 1700 aa20.43■□□□□ 0.86
CPSF1-205ENST00000531042 TMEM88BA6NKF7 163 aa20.42■□□□□ 0.86
CPSF1-205ENST00000531042 HSPA1AP0DMV8 641 aaKnown RBP20.41■□□□□ 0.86
CPSF1-205ENST00000531042 HSPA1BP0DMV9 641 aaKnown RBP20.41■□□□□ 0.86
CPSF1-205ENST00000531042 CXCL9Q07325 125 aa20.41■□□□□ 0.86
CPSF1-205ENST00000531042 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
CPSF1-205ENST00000531042 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
CPSF1-205ENST00000531042 CNTNAP1P78357 1384 aa20.41■□□□□ 0.86
CPSF1-205ENST00000531042 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
CPSF1-205ENST00000531042 COL13A1Q5TAT6 717 aaPredicted RBP20.4■□□□□ 0.86
CPSF1-205ENST00000531042 CELF1Q92879 486 aaKnown RBP20.4■□□□□ 0.86
CPSF1-205ENST00000531042 DUOX1Q9NRD9 1551 aa20.4■□□□□ 0.86
CPSF1-205ENST00000531042 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
CPSF1-205ENST00000531042 USP50Q70EL3 339 aaPredicted RBP20.39■□□□□ 0.85
CPSF1-205ENST00000531042 ZBTB38Q8NAP3 1195 aaPredicted RBP20.39■□□□□ 0.85
CPSF1-205ENST00000531042 CHMP4AQ9BY43 222 aa20.39■□□□□ 0.85
CPSF1-205ENST00000531042 GPRC5DQ9NZD1 345 aa20.39■□□□□ 0.85
CPSF1-205ENST00000531042 COL4A1P02462 1669 aa20.38■□□□□ 0.85
CPSF1-205ENST00000531042 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
CPSF1-205ENST00000531042 TSPYL6Q8N831 410 aa20.38■□□□□ 0.85
CPSF1-205ENST00000531042 MYD88Q99836 296 aa20.38■□□□□ 0.85
CPSF1-205ENST00000531042 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
CPSF1-205ENST00000531042 CIAPIN1Q6FI81 312 aa20.37■□□□□ 0.85
CPSF1-205ENST00000531042 CCDC191Q8NCU4 936 aa20.37■□□□□ 0.85
CPSF1-205ENST00000531042 RAD17O75943 681 aa20.36■□□□□ 0.85
CPSF1-205ENST00000531042 TNIP1Q15025 636 aa20.36■□□□□ 0.85
CPSF1-205ENST00000531042 TSR2Q969E8 191 aaKnown RBP20.36■□□□□ 0.85
CPSF1-205ENST00000531042 ADARB2Q9NS39 739 aaKnown RBP20.36■□□□□ 0.85
CPSF1-205ENST00000531042 NSFL1CQ9UNZ2 370 aaKnown RBP20.36■□□□□ 0.85
CPSF1-205ENST00000531042 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
CPSF1-205ENST00000531042 DDX58O95786 925 aaKnown RBP20.35■□□□□ 0.85
CPSF1-205ENST00000531042 HSP90B1P14625 803 aaKnown RBP20.35■□□□□ 0.85
CPSF1-205ENST00000531042 GMPSP49915 693 aaPredicted RBP20.35■□□□□ 0.85
CPSF1-205ENST00000531042 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
CPSF1-205ENST00000531042 METTL22Q9BUU2 404 aaPredicted RBP20.35■□□□□ 0.85
CPSF1-205ENST00000531042 CDHR2Q9BYE9 1310 aa20.34■□□□□ 0.85
CPSF1-205ENST00000531042 PCCAP05165 728 aaPredicted RBP20.34■□□□□ 0.85
CPSF1-205ENST00000531042 VEGFBP49765 207 aa20.34■□□□□ 0.85
CPSF1-205ENST00000531042 RPS8P62241 208 aaKnown RBP20.34■□□□□ 0.85
CPSF1-205ENST00000531042 GPSM2P81274 684 aa20.34■□□□□ 0.85
CPSF1-205ENST00000531042 WASHC4Q2M389 1173 aa20.34■□□□□ 0.85
CPSF1-205ENST00000531042 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
CPSF1-205ENST00000531042 RASSF10A6NK89 507 aa20.33■□□□□ 0.85
CPSF1-205ENST00000531042 BCL2L13Q9BXK5 485 aa20.33■□□□□ 0.85
CPSF1-205ENST00000531042 SEC31BQ9NQW1 1179 aa20.33■□□□□ 0.85
CPSF1-205ENST00000531042 POLLQ9UGP5 575 aa20.33■□□□□ 0.85
CPSF1-205ENST00000531042 C6orf229H3BNL8 230 aa20.32■□□□□ 0.84
CPSF1-205ENST00000531042 PDE8AO60658 829 aa20.32■□□□□ 0.84
CPSF1-205ENST00000531042 FMR1Q06787 632 aaKnown RBP eCLIP20.32■□□□□ 0.848e-7■■■□□ 16.9
CPSF1-205ENST00000531042 DEFB115Q30KQ5 88 aa20.32■□□□□ 0.84
CPSF1-205ENST00000531042 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
CPSF1-205ENST00000531042 JARID2Q92833 1246 aaPredicted RBP20.32■□□□□ 0.84
CPSF1-205ENST00000531042 MAP3K2Q9Y2U5 619 aa20.32■□□□□ 0.84
CPSF1-205ENST00000531042 TRPM7Q96QT4 1865 aa20.31■□□□□ 0.84
CPSF1-205ENST00000531042 RIMBP2O15034 1052 aa20.31■□□□□ 0.84
CPSF1-205ENST00000531042 KSR2Q6VAB6 950 aa20.31■□□□□ 0.84
CPSF1-205ENST00000531042 STK31Q9BXU1 1019 aa20.31■□□□□ 0.84
CPSF1-205ENST00000531042 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
CPSF1-205ENST00000531042 IL16Q14005 1332 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 PI4KAP2A4QPH2 592 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
CPSF1-205ENST00000531042 TRAF5O00463 557 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
CPSF1-205ENST00000531042 CCDC152Q4G0S7 254 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 PI4KAP1Q8N8J0 262 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 TBC1D16Q8TBP0 767 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 EYA3Q99504 573 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 DBNDD1Q9H9R9 158 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 PGAP2Q9UHJ9 254 aa20.3■□□□□ 0.84
CPSF1-205ENST00000531042 CNOT7Q9UIV1 285 aaKnown RBP20.3■□□□□ 0.84
CPSF1-205ENST00000531042 ABT1Q9ULW3 272 aaKnown RBP20.3■□□□□ 0.84
CPSF1-205ENST00000531042 ANP32CO43423 234 aa20.29■□□□□ 0.84
CPSF1-205ENST00000531042 IGKV5-2P06315 115 aa20.29■□□□□ 0.84
CPSF1-205ENST00000531042 TNS4Q8IZW8 715 aa20.29■□□□□ 0.84
CPSF1-205ENST00000531042 PODXL2Q9NZ53 605 aa20.29■□□□□ 0.84
CPSF1-205ENST00000531042 PSMD14O00487 310 aa20.28■□□□□ 0.84
CPSF1-205ENST00000531042 HIRAP54198 1017 aaPredicted RBP20.28■□□□□ 0.84
CPSF1-205ENST00000531042 CST9Q5W186 159 aa20.28■□□□□ 0.84
CPSF1-205ENST00000531042 ZC3H15Q8WU90 426 aaKnown RBP20.28■□□□□ 0.84
CPSF1-205ENST00000531042 DPF2Q92785 391 aa20.28■□□□□ 0.84
CPSF1-205ENST00000531042 GPR101Q96P66 508 aaPredicted RBP20.28■□□□□ 0.84
CPSF1-205ENST00000531042 CCDC85AQ96PX6 553 aaPredicted RBP20.28■□□□□ 0.84
CPSF1-205ENST00000531042 ZBTB12Q9Y330 459 aaPredicted RBP20.28■□□□□ 0.84
CPSF1-205ENST00000531042 SHTN1A0MZ66 631 aa20.27■□□□□ 0.84
CPSF1-205ENST00000531042 FOXN1O15353 648 aa20.27■□□□□ 0.84
CPSF1-205ENST00000531042 ECE2O60344 883 aa20.27■□□□□ 0.84
CPSF1-205ENST00000531042 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms