RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	KIAA2012	Q0VF49	1180 aa		20.3	■□□□□ 0.84
TM9SF1-209	ENST00000530468	ADARB2	Q9NS39	739 aa	Known RBP	20.3	■□□□□ 0.84
TM9SF1-209	ENST00000530468	WBP1L	Q9NX94	342 aa		20.3	■□□□□ 0.84
TM9SF1-209	ENST00000530468	GPRC5D	Q9NZD1	345 aa		20.3	■□□□□ 0.84
TM9SF1-209	ENST00000530468	DBF4	Q9UBU7	674 aa	Predicted RBP	20.3	■□□□□ 0.84
TM9SF1-209	ENST00000530468	ABT1	Q9ULW3	272 aa	Known RBP	20.3	■□□□□ 0.84
TM9SF1-209	ENST00000530468	CDHR2	Q9BYE9	1310 aa		20.29	■□□□□ 0.84
TM9SF1-209	ENST00000530468	CXCL9	Q07325	125 aa		20.29	■□□□□ 0.84
TM9SF1-209	ENST00000530468	ANKRD13D	Q6ZTN6	518 aa		20.29	■□□□□ 0.84
TM9SF1-209	ENST00000530468	ADAMTS8	Q9UP79	889 aa		20.29	■□□□□ 0.84
TM9SF1-209	ENST00000530468	LAMB2	P55268	1798 aa		20.29	■□□□□ 0.84
TM9SF1-209	ENST00000530468	CIAPIN1	Q6FI81	312 aa		20.28	■□□□□ 0.84
TM9SF1-209	ENST00000530468	CFAP44	Q96MT7	982 aa		20.28	■□□□□ 0.84
TM9SF1-209	ENST00000530468	WDR33	Q9C0J8	1336 aa	Known RBP	20.27	■□□□□ 0.84
TM9SF1-209	ENST00000530468	ISCA1	Q9BUE6	129 aa		20.27	■□□□□ 0.84
TM9SF1-209	ENST00000530468	HYPK	Q9NX55	129 aa		20.27	■□□□□ 0.84
TM9SF1-209	ENST00000530468	MAP2K1	Q02750	393 aa	Predicted RBP	20.26	■□□□□ 0.83
TM9SF1-209	ENST00000530468	TNIP1	Q15025	636 aa		20.26	■□□□□ 0.83
TM9SF1-209	ENST00000530468	GMPS	P49915	693 aa	Predicted RBP	20.25	■□□□□ 0.83
TM9SF1-209	ENST00000530468	DUSP27	Q5VZP5	1158 aa		20.25	■□□□□ 0.83
TM9SF1-209	ENST00000530468	ECE1	P42892	770 aa		20.24	■□□□□ 0.83
TM9SF1-209	ENST00000530468	SF3B3	Q15393	1217 aa	Known RBP	20.24	■□□□□ 0.83
TM9SF1-209	ENST00000530468	BCL2L13	Q9BXK5	485 aa		20.24	■□□□□ 0.83
TM9SF1-209	ENST00000530468	LRRC37A	A6NMS7	1700 aa		20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	TRAF5	O00463	557 aa		20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	RAD17	O75943	681 aa		20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	FMR1	Q06787	632 aa	Known RBP eCLIP	20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	TRIM28	Q13263	835 aa	Known RBP	20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	ZC3H15	Q8WU90	426 aa	Known RBP	20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	FAM89A	Q96GI7	184 aa		20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	MBIP	Q9NS73	344 aa		20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	TLL2	Q9Y6L7	1015 aa		20.23	■□□□□ 0.83
TM9SF1-209	ENST00000530468	DUOX1	Q9NRD9	1551 aa		20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	ATP5J2-PTCD1	G3V325	749 aa		20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	CALD1	Q05682	793 aa	Known RBP	20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	CST9	Q5W186	159 aa		20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	CAPNS2	Q96L46	248 aa		20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	PRKRIP1	Q9H875	184 aa	Predicted RBP	20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	PGAP2	Q9UHJ9	254 aa		20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	DDX60	Q8IY21	1712 aa	Known RBP	20.22	■□□□□ 0.83
TM9SF1-209	ENST00000530468	ZNF853	P0CG23	659 aa		20.21	■□□□□ 0.83
TM9SF1-209	ENST00000530468	LBX1	P52954	281 aa		20.21	■□□□□ 0.83
TM9SF1-209	ENST00000530468	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	20.21	■□□□□ 0.83
TM9SF1-209	ENST00000530468	IFT57	Q9NWB7	429 aa		20.21	■□□□□ 0.83
TM9SF1-209	ENST00000530468	THSD7B	Q9C0I4	1608 aa		20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	YDJC	A8MPS7	323 aa		20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	HSPA8	P11142	646 aa	Known RBP	20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	HSP90B1	P14625	803 aa	Known RBP	20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	GOLGA2	Q08379	1002 aa		20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	WASHC4	Q2M389	1173 aa		20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	CELF1	Q92879	486 aa	Known RBP	20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	ZNF428	Q96B54	188 aa		20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	NSFL1C	Q9UNZ2	370 aa	Known RBP	20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	TRPM7	Q96QT4	1865 aa		20.2	■□□□□ 0.82
TM9SF1-209	ENST00000530468	IRS4	O14654	1257 aa	Predicted RBP	20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468	GNAI1	P63096	354 aa		20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468	CYP4F22	Q6NT55	531 aa		20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468	RIC3	Q7Z5B4	369 aa		20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468	DPF2	Q92785	391 aa		20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468	GPR101	Q96P66	508 aa	Predicted RBP	20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468	BEGAIN	Q9BUH8	593 aa		20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468	CNOT7	Q9UIV1	285 aa	Known RBP	20.19	■□□□□ 0.82
TM9SF1-209	ENST00000530468		H7C1D1	291 aa		20.18	■□□□□ 0.82
TM9SF1-209	ENST00000530468	CELF2	O95319	508 aa	Known RBP	20.18	■□□□□ 0.82
TM9SF1-209	ENST00000530468	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	20.18	■□□□□ 0.82
TM9SF1-209	ENST00000530468	EYA3	Q99504	573 aa		20.18	■□□□□ 0.82
TM9SF1-209	ENST00000530468	C6orf229	H3BNL8	230 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	APAF1	O14727	1248 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	HIRA	P54198	1017 aa	Predicted RBP	20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	RTL5	Q5HYW3	569 aa	Predicted RBP	20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	CDC37L1	Q7L3B6	337 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	SAPCD2	Q86UD0	394 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	MICALL2	Q8IY33	904 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	TRPM4	Q8TD43	1214 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	HHIPL1	Q96JK4	782 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	CHMP4A	Q9BY43	222 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	GLIS2	Q9BZE0	524 aa	Predicted RBP	20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	TAF1	P21675	1872 aa		20.17	■□□□□ 0.82
TM9SF1-209	ENST00000530468	MAP2K2	P36507	400 aa		20.16	■□□□□ 0.82
TM9SF1-209	ENST00000530468	RPS8	P62241	208 aa	Known RBP	20.16	■□□□□ 0.82
TM9SF1-209	ENST00000530468	GPSM2	P81274	684 aa		20.16	■□□□□ 0.82
TM9SF1-209	ENST00000530468	GRM1	Q13255	1194 aa		20.16	■□□□□ 0.82
TM9SF1-209	ENST00000530468	POLL	Q9UGP5	575 aa		20.16	■□□□□ 0.82
TM9SF1-209	ENST00000530468	PSMD14	O00487	310 aa		20.15	■□□□□ 0.82
TM9SF1-209	ENST00000530468	RPS12	P25398	132 aa	Known RBP	20.15	■□□□□ 0.82
TM9SF1-209	ENST00000530468	CCDC191	Q8NCU4	936 aa		20.15	■□□□□ 0.82
TM9SF1-209	ENST00000530468	PHAX	Q9H814	394 aa	Known RBP	20.15	■□□□□ 0.82
TM9SF1-209	ENST00000530468	DBNDD1	Q9H9R9	158 aa		20.15	■□□□□ 0.82
TM9SF1-209	ENST00000530468	RIMBP2	O15034	1052 aa		20.14	■□□□□ 0.81
TM9SF1-209	ENST00000530468	ZBTB12	Q9Y330	459 aa	Predicted RBP	20.14	■□□□□ 0.81
TM9SF1-209	ENST00000530468	ELL2	O00472	640 aa	Predicted RBP	20.13	■□□□□ 0.81
TM9SF1-209	ENST00000530468	ECE2	O60344	883 aa		20.13	■□□□□ 0.81
TM9SF1-209	ENST00000530468	PCCA	P05165	728 aa	Predicted RBP	20.13	■□□□□ 0.81
TM9SF1-209	ENST00000530468	TBC1D16	Q8TBP0	767 aa		20.13	■□□□□ 0.81
TM9SF1-209	ENST00000530468	MYD88	Q99836	296 aa		20.13	■□□□□ 0.81
TM9SF1-209	ENST00000530468	PODXL2	Q9NZ53	605 aa		20.13	■□□□□ 0.81
TM9SF1-209	ENST00000530468	SHTN1	A0MZ66	631 aa		20.12	■□□□□ 0.81
TM9SF1-209	ENST00000530468	DDX58	O95786	925 aa	Known RBP	20.12	■□□□□ 0.81
TM9SF1-209	ENST00000530468	CCDC152	Q4G0S7	254 aa		20.12	■□□□□ 0.81
TM9SF1-209	ENST00000530468	CCDC30	Q5VVM6	783 aa		20.12	■□□□□ 0.81

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms