RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LTBP1Q14766 1721 aa27.03■■□□□ 1.92
SMPD1-204ENST00000530395 RIC3Q7Z5B4 369 aa27.03■■□□□ 1.92
SMPD1-204ENST00000530395 FAM89AQ96GI7 184 aa27.03■■□□□ 1.92
SMPD1-204ENST00000530395 ELL2O00472 640 aaPredicted RBP27.02■■□□□ 1.92
SMPD1-204ENST00000530395 TRIM28Q13263 835 aaKnown RBP27.01■■□□□ 1.91
SMPD1-204ENST00000530395 ITGBL1O95965 494 aaPredicted RBP27■■□□□ 1.91
SMPD1-204ENST00000530395 SCNN1DP51172 638 aa27■■□□□ 1.91
SMPD1-204ENST00000530395 MKRN1Q9UHC7 482 aaKnown RBP27■■□□□ 1.91
SMPD1-204ENST00000530395 ZNRF3Q9ULT6 936 aa27■■□□□ 1.91
SMPD1-204ENST00000530395 SF3B3Q15393 1217 aaKnown RBP26.99■■□□□ 1.91
SMPD1-204ENST00000530395 PHAXQ9H814 394 aaKnown RBP26.99■■□□□ 1.91
SMPD1-204ENST00000530395 TMEM88BA6NKF7 163 aa26.98■■□□□ 1.91
SMPD1-204ENST00000530395 HSP90B1P14625 803 aaKnown RBP26.98■■□□□ 1.91
SMPD1-204ENST00000530395 KIAA2012Q0VF49 1180 aa26.98■■□□□ 1.91
SMPD1-204ENST00000530395 CCDC30Q5VVM6 783 aa26.98■■□□□ 1.91
SMPD1-204ENST00000530395 MAP1SQ66K74 1059 aaPredicted RBP26.98■■□□□ 1.91
SMPD1-204ENST00000530395 CNTROBQ8N137 903 aa26.98■■□□□ 1.91
SMPD1-204ENST00000530395 C8orf58Q8NAV2 365 aa26.98■■□□□ 1.91
SMPD1-204ENST00000530395 IRS4O14654 1257 aaPredicted RBP26.97■■□□□ 1.91
SMPD1-204ENST00000530395 DDX58O95786 925 aaKnown RBP26.97■■□□□ 1.91
SMPD1-204ENST00000530395 RTL5Q5HYW3 569 aaPredicted RBP26.97■■□□□ 1.91
SMPD1-204ENST00000530395 CNTNAP1P78357 1384 aa26.97■■□□□ 1.91
SMPD1-204ENST00000530395 HSPA1AP0DMV8 641 aaKnown RBP26.96■■□□□ 1.91
SMPD1-204ENST00000530395 HSPA1BP0DMV9 641 aaKnown RBP26.96■■□□□ 1.91
SMPD1-204ENST00000530395 EPS15P42566 896 aa26.96■■□□□ 1.91
SMPD1-204ENST00000530395 USP50Q70EL3 339 aaPredicted RBP26.96■■□□□ 1.91
SMPD1-204ENST00000530395 DUOX1Q9NRD9 1551 aa26.96■■□□□ 1.91
SMPD1-204ENST00000530395 CXCL9Q07325 125 aa26.95■■□□□ 1.9
SMPD1-204ENST00000530395 CCDC184Q52MB2 194 aa26.95■■□□□ 1.9
SMPD1-204ENST00000530395 ZBTB38Q8NAP3 1195 aaPredicted RBP26.95■■□□□ 1.9
SMPD1-204ENST00000530395 MYD88Q99836 296 aa26.95■■□□□ 1.9
SMPD1-204ENST00000530395 CCDC27Q2M243 656 aa26.94■■□□□ 1.9
SMPD1-204ENST00000530395 CELF1Q92879 486 aaKnown RBP26.94■■□□□ 1.9
SMPD1-204ENST00000530395 CIAPIN1Q6FI81 312 aa26.93■■□□□ 1.9
SMPD1-204ENST00000530395 CCDC191Q8NCU4 936 aa26.93■■□□□ 1.9
SMPD1-204ENST00000530395 GPRC5DQ9NZD1 345 aa26.93■■□□□ 1.9
SMPD1-204ENST00000530395 TNIP1Q15025 636 aa26.92■■□□□ 1.9
SMPD1-204ENST00000530395 ADARB2Q9NS39 739 aaKnown RBP26.92■■□□□ 1.9
SMPD1-204ENST00000530395 NSFL1CQ9UNZ2 370 aaKnown RBP26.92■■□□□ 1.9
SMPD1-204ENST00000530395 CDHR2Q9BYE9 1310 aa26.91■■□□□ 1.9
SMPD1-204ENST00000530395 TSR2Q969E8 191 aaKnown RBP26.91■■□□□ 1.9
SMPD1-204ENST00000530395 CWC25Q9NXE8 425 aaPredicted RBP26.91■■□□□ 1.9
SMPD1-204ENST00000530395 TRPM7Q96QT4 1865 aa26.9■■□□□ 1.9
SMPD1-204ENST00000530395 GMPSP49915 693 aaPredicted RBP26.9■■□□□ 1.9
SMPD1-204ENST00000530395 WWC1Q8IX03 1113 aa26.9■■□□□ 1.9
SMPD1-204ENST00000530395 METTL22Q9BUU2 404 aaPredicted RBP26.9■■□□□ 1.9
SMPD1-204ENST00000530395 BCL2L13Q9BXK5 485 aa26.9■■□□□ 1.9
SMPD1-204ENST00000530395 STK31Q9BXU1 1019 aa26.9■■□□□ 1.9
SMPD1-204ENST00000530395 MRS2Q9HD23 443 aa26.9■■□□□ 1.9
SMPD1-204ENST00000530395 ANP32CO43423 234 aa26.89■■□□□ 1.9
SMPD1-204ENST00000530395 RAD17O75943 681 aa26.89■■□□□ 1.9
SMPD1-204ENST00000530395 PCCAP05165 728 aaPredicted RBP26.89■■□□□ 1.9
SMPD1-204ENST00000530395 COL13A1Q5TAT6 717 aaPredicted RBP26.89■■□□□ 1.9
SMPD1-204ENST00000530395 TSPYL6Q8N831 410 aa26.89■■□□□ 1.9
SMPD1-204ENST00000530395 COL4A1P02462 1669 aa26.89■■□□□ 1.89
SMPD1-204ENST00000530395 RPS8P62241 208 aaKnown RBP26.88■■□□□ 1.89
SMPD1-204ENST00000530395 WASHC4Q2M389 1173 aa26.88■■□□□ 1.89
SMPD1-204ENST00000530395 MAP3K2Q9Y2U5 619 aa26.88■■□□□ 1.89
SMPD1-204ENST00000530395 IL16Q14005 1332 aa26.88■■□□□ 1.89
SMPD1-204ENST00000530395 C6orf229H3BNL8 230 aa26.87■■□□□ 1.89
SMPD1-204ENST00000530395 CCDC152Q4G0S7 254 aa26.87■■□□□ 1.89
SMPD1-204ENST00000530395 NCBP3Q53F19 620 aaKnown RBP26.87■■□□□ 1.89
SMPD1-204ENST00000530395 EYA3Q99504 573 aa26.87■■□□□ 1.89
SMPD1-204ENST00000530395 ZNF316A6NFI3 1004 aaPredicted RBP26.86■■□□□ 1.89
SMPD1-204ENST00000530395 PDE8AO60658 829 aa26.86■■□□□ 1.89
SMPD1-204ENST00000530395 GPSM2P81274 684 aa26.86■■□□□ 1.89
SMPD1-204ENST00000530395 KSR2Q6VAB6 950 aa26.86■■□□□ 1.89
SMPD1-204ENST00000530395 ABT1Q9ULW3 272 aaKnown RBP26.86■■□□□ 1.89
SMPD1-204ENST00000530395 MYH3P11055 1940 aa26.86■■□□□ 1.89
SMPD1-204ENST00000530395 RASSF10A6NK89 507 aa26.85■■□□□ 1.89
SMPD1-204ENST00000530395 VEGFBP49765 207 aa26.85■■□□□ 1.89
SMPD1-204ENST00000530395 TWISTNBQ3B726 338 aaPredicted RBP26.85■■□□□ 1.89
SMPD1-204ENST00000530395 YDJCA8MPS7 323 aa26.84■■□□□ 1.89
SMPD1-204ENST00000530395 RIMBP2O15034 1052 aa26.84■■□□□ 1.89
SMPD1-204ENST00000530395 NEXNQ0ZGT2 675 aa26.84■■□□□ 1.89
SMPD1-204ENST00000530395 DEFB115Q30KQ5 88 aa26.84■■□□□ 1.89
SMPD1-204ENST00000530395 POLLQ9UGP5 575 aa26.84■■□□□ 1.89
SMPD1-204ENST00000530395 CACNA1FO60840 1977 aa26.84■■□□□ 1.89
SMPD1-204ENST00000530395 PI4KAP2A4QPH2 592 aa26.83■■□□□ 1.89
SMPD1-204ENST00000530395 PI4KAP1Q8N8J0 262 aa26.83■■□□□ 1.89
SMPD1-204ENST00000530395 DBNDD1Q9H9R9 158 aa26.83■■□□□ 1.89
SMPD1-204ENST00000530395 SEC31BQ9NQW1 1179 aa26.83■■□□□ 1.89
SMPD1-204ENST00000530395 TNS4Q8IZW8 715 aa26.82■■□□□ 1.88
SMPD1-204ENST00000530395 TBC1D16Q8TBP0 767 aa26.82■■□□□ 1.88
SMPD1-204ENST00000530395 H7C1D1 291 aa26.81■■□□□ 1.88
SMPD1-204ENST00000530395 JARID2Q92833 1246 aaPredicted RBP26.81■■□□□ 1.88
SMPD1-204ENST00000530395 AIDAQ96BJ3 306 aa26.81■■□□□ 1.88
SMPD1-204ENST00000530395 PODXL2Q9NZ53 605 aa26.81■■□□□ 1.88
SMPD1-204ENST00000530395 ANKIB1Q9P2G1 1089 aa26.81■■□□□ 1.88
SMPD1-204ENST00000530395 CNOT7Q9UIV1 285 aaKnown RBP26.81■■□□□ 1.88
SMPD1-204ENST00000530395 ECE2O60344 883 aa26.8■■□□□ 1.88
SMPD1-204ENST00000530395 ZC3H15Q8WU90 426 aaKnown RBP26.8■■□□□ 1.88
SMPD1-204ENST00000530395 ZC3H12CQ9C0D7 883 aaKnown RBP26.8■■□□□ 1.88
SMPD1-204ENST00000530395 TRAF5O00463 557 aa26.79■■□□□ 1.88
SMPD1-204ENST00000530395 DPF2Q92785 391 aa26.79■■□□□ 1.88
SMPD1-204ENST00000530395 CCDC85AQ96PX6 553 aaPredicted RBP26.79■■□□□ 1.88
SMPD1-204ENST00000530395 PSMD14O00487 310 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 UFL1O94874 794 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 SLC4A2P04920 1241 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 IGKV5-2P06315 115 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms