RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 DNAI2Q9GZS0 605 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 NPHP3Q7Z494 1330 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 KCNG4Q8TDN1 519 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 WDR62O43379 1518 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 LDHCP07864 332 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 MRPS27Q92552 414 aaKnown RBP17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 RBM8AQ9Y5S9 174 aaKnown RBP17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 CDC5LQ99459 802 aaKnown RBP17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 EHMT1Q9H9B1 1298 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 TTC41PQ6P2S7 1318 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 PLEKHM2Q8IWE5 1019 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 UHRF1BP1LA0JNW5 1464 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 CCDC82Q8N4S0 544 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 FEZ1Q99689 392 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 SYKP43405 635 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
PCDHA4-203ENST00000530339 GOLIM4O00461 696 aa17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 TMTC2Q8N394 836 aa17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 TRIM21P19474 475 aaKnown RBP17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 ISM2Q6H9L7 571 aa17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 NAA15Q9BXJ9 866 aaKnown RBP17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 SPTY2D1Q68D10 685 aaPredicted RBP17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 PTCD1O75127 700 aaKnown RBP17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 ALS2CR12Q96Q35 445 aa17.73■□□□□ 0.43
PCDHA4-203ENST00000530339 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
PCDHA4-203ENST00000530339 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
PCDHA4-203ENST00000530339 RBSNQ9H1K0 784 aa17.72■□□□□ 0.43
PCDHA4-203ENST00000530339 ABCC10Q5T3U5 1492 aa17.72■□□□□ 0.43
PCDHA4-203ENST00000530339 EHBP1Q8NDI1 1231 aa17.72■□□□□ 0.43
PCDHA4-203ENST00000530339 DYDC1Q8WWB3 177 aa17.72■□□□□ 0.43
PCDHA4-203ENST00000530339 VAMP4O75379 141 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 PTGS1P23219 599 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 BICDL1Q6ZP65 573 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 AOPEPQ8N6M6 819 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 IVLP07476 585 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 TERF1P54274 439 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 CEP85Q6P2H3 762 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 IFFO1Q0D2I5 559 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 CNNM2Q9H8M5 875 aa17.71■□□□□ 0.43
PCDHA4-203ENST00000530339 ANKRD62A6NC57 917 aa17.71■□□□□ 0.42
PCDHA4-203ENST00000530339 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.42
PCDHA4-203ENST00000530339 NLRP5P59047 1200 aa17.71■□□□□ 0.42
PCDHA4-203ENST00000530339 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.42
PCDHA4-203ENST00000530339 KRT23Q9C075 422 aa17.71■□□□□ 0.42
PCDHA4-203ENST00000530339 RMND1Q9NWS8 449 aa17.71■□□□□ 0.42
PCDHA4-203ENST00000530339 ZNF445P59923 1031 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 PDE4BQ07343 736 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 TDRD12Q587J7 1177 aaKnown RBP17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 GBP2P32456 591 aaPredicted RBP17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 AK2P54819 239 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 OGFRQ9NZT2 677 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 RAD50Q92878 1312 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 DNMT1P26358 1616 aaKnown RBP17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 DHX37Q8IY37 1157 aaKnown RBP17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 TCP11L1Q9NUJ3 509 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 CUL5Q93034 780 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 BABAM1Q9NWV8 329 aa17.7■□□□□ 0.42
PCDHA4-203ENST00000530339 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 RANBP6O60518 1105 aaKnown RBP17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 EZRP15311 586 aaKnown RBP17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 SYT1P21579 422 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 MTIF2P46199 727 aaKnown RBP17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 ANKRD13DQ6ZTN6 518 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 FLT4P35916 1363 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 CTAGE15A4D2H0 777 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 EXOC5O00471 708 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 N4BP3O15049 544 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 CTAGE8P0CG41 777 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 CTAGE6Q86UF2 777 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 CADPS2Q86UW7 1296 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 CTAGE4Q8IX94 777 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 MFSD6Q6ZSS7 791 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 MICU3Q86XE3 530 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 CALML4Q96GE6 196 aa17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 V9GYY5 206 aaPredicted RBP17.69■□□□□ 0.42
PCDHA4-203ENST00000530339 BAG3O95817 575 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 KSR2Q6VAB6 950 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms